RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 CCDC125Q86Z20 511 aa17.49■□□□□ 0.39
CHRDL2-209ENST00000534276 SEPT12Q8IYM1 358 aa17.49■□□□□ 0.39
CHRDL2-209ENST00000534276 CCDC9Q9Y3X0 531 aaKnown RBP17.49■□□□□ 0.39
CHRDL2-209ENST00000534276 CCDC61Q9Y6R9 512 aa17.49■□□□□ 0.39
CHRDL2-209ENST00000534276 NWD2Q9ULI1 1742 aa17.49■□□□□ 0.39
CHRDL2-209ENST00000534276 ONECUT3O60422 494 aaPredicted RBP17.48■□□□□ 0.39
CHRDL2-209ENST00000534276 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
CHRDL2-209ENST00000534276 PLEKHG3A1L390 1219 aa17.47■□□□□ 0.39
CHRDL2-209ENST00000534276 NEUROD1Q13562 356 aa17.47■□□□□ 0.39
CHRDL2-209ENST00000534276 NBPF8Q3BBV2 869 aa17.47■□□□□ 0.39
CHRDL2-209ENST00000534276 BTG4Q9NY30 223 aa17.47■□□□□ 0.39
CHRDL2-209ENST00000534276 POLR3AO14802 1390 aaPredicted RBP17.47■□□□□ 0.39
CHRDL2-209ENST00000534276 ACEP12821 1306 aa17.47■□□□□ 0.39
CHRDL2-209ENST00000534276 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
CHRDL2-209ENST00000534276 TONSLQ96HA7 1378 aa17.46■□□□□ 0.39
CHRDL2-209ENST00000534276 ITSN1Q15811 1721 aa17.46■□□□□ 0.39
CHRDL2-209ENST00000534276 PRDM11Q9NQV5 511 aa17.45■□□□□ 0.38
CHRDL2-209ENST00000534276 SRPK2P78362 688 aaKnown RBP17.44■□□□□ 0.38
CHRDL2-209ENST00000534276 COL14A1Q05707 1796 aaKnown RBP17.42■□□□□ 0.38
CHRDL2-209ENST00000534276 TOPAZ1Q8N9V7 1692 aa17.42■□□□□ 0.38
CHRDL2-209ENST00000534276 NUTM2GQ5VZR2 741 aa17.42■□□□□ 0.38
CHRDL2-209ENST00000534276 KRT27Q7Z3Y8 459 aa17.42■□□□□ 0.38
CHRDL2-209ENST00000534276 CABP2Q9NPB3 220 aa17.42■□□□□ 0.38
CHRDL2-209ENST00000534276 KIAA0232Q92628 1395 aa17.41■□□□□ 0.38
CHRDL2-209ENST00000534276 CRYBG1Q9Y4K1 1723 aa17.41■□□□□ 0.38
CHRDL2-209ENST00000534276 BLMP54132 1417 aaPredicted RBP17.41■□□□□ 0.38
CHRDL2-209ENST00000534276 FAM98CQ17RN3 349 aaKnown RBP17.41■□□□□ 0.38
CHRDL2-209ENST00000534276 NRAPQ86VF7 1730 aa17.41■□□□□ 0.38
CHRDL2-209ENST00000534276 A0A0G2JS52 829 aa17.4■□□□□ 0.38
CHRDL2-209ENST00000534276 MYT1Q01538 1121 aa17.4■□□□□ 0.38
CHRDL2-209ENST00000534276 SPATA31A5Q5VU36 1347 aa17.4■□□□□ 0.38
CHRDL2-209ENST00000534276 SPATA31A7Q8IWB4 1347 aa17.4■□□□□ 0.38
CHRDL2-209ENST00000534276 BRWD3Q6RI45 1802 aa17.4■□□□□ 0.38
CHRDL2-209ENST00000534276 PPIP5K1Q6PFW1 1433 aa17.4■□□□□ 0.38
CHRDL2-209ENST00000534276 CHRNA2Q15822 529 aa17.39■□□□□ 0.38
CHRDL2-209ENST00000534276 ABTB2Q8N961 1025 aa17.39■□□□□ 0.38
CHRDL2-209ENST00000534276 ZC3H6P61129 1189 aaKnown RBP17.38■□□□□ 0.37
CHRDL2-209ENST00000534276 ZRANB1Q9UGI0 708 aa17.38■□□□□ 0.37
CHRDL2-209ENST00000534276 CABP1Q9NZU7 370 aa17.38■□□□□ 0.37
CHRDL2-209ENST00000534276 EP400Q96L91 3159 aa17.37■□□□□ 0.37
CHRDL2-209ENST00000534276 ROCK2O75116 1388 aaKnown RBP17.36■□□□□ 0.37
CHRDL2-209ENST00000534276 SF3B2Q13435 895 aaKnown RBP17.36■□□□□ 0.37
CHRDL2-209ENST00000534276 DEFB132Q7Z7B7 95 aa17.36■□□□□ 0.37
CHRDL2-209ENST00000534276 STRN4Q9NRL3 753 aa17.36■□□□□ 0.37
CHRDL2-209ENST00000534276 USP19O94966 1318 aa17.36■□□□□ 0.37
CHRDL2-209ENST00000534276 BRD4O60885 1362 aaPredicted RBP17.36■□□□□ 0.37
CHRDL2-209ENST00000534276 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
CHRDL2-209ENST00000534276 NLRP13Q86W25 1043 aa17.35■□□□□ 0.37
CHRDL2-209ENST00000534276 SPATA31A1Q5TZJ5 1347 aa17.35■□□□□ 0.37
CHRDL2-209ENST00000534276 EVC2Q86UK5 1308 aa17.35■□□□□ 0.37
CHRDL2-209ENST00000534276 TRPM1Q7Z4N2 1603 aa17.35■□□□□ 0.37
CHRDL2-209ENST00000534276 PHRF1Q9P1Y6 1649 aaKnown RBP17.35■□□□□ 0.37
CHRDL2-209ENST00000534276 QRICH2Q9H0J4 1663 aa17.35■□□□□ 0.37
CHRDL2-209ENST00000534276 CPDO75976 1380 aa17.34■□□□□ 0.37
CHRDL2-209ENST00000534276 GCP02774 474 aa17.33■□□□□ 0.36
CHRDL2-209ENST00000534276 USP6P35125 1406 aa17.32■□□□□ 0.36
CHRDL2-209ENST00000534276 EVA1CP58658 441 aa17.31■□□□□ 0.36
CHRDL2-209ENST00000534276 NRKQ7Z2Y5 1582 aa17.31■□□□□ 0.36
CHRDL2-209ENST00000534276 NLRP6P59044 892 aa17.3■□□□□ 0.36
CHRDL2-209ENST00000534276 FAM182BQ5T319 152 aa17.3■□□□□ 0.36
CHRDL2-209ENST00000534276 SSH2Q76I76 1423 aa17.3■□□□□ 0.36
CHRDL2-209ENST00000534276 CAMTA1Q9Y6Y1 1673 aa17.3■□□□□ 0.36
CHRDL2-209ENST00000534276 THSD7AQ9UPZ6 1657 aa17.29■□□□□ 0.36
CHRDL2-209ENST00000534276 LARP1Q6PKG0 1096 aaKnown RBP17.29■□□□□ 0.36
CHRDL2-209ENST00000534276 USP35Q9P2H5 1018 aa17.29■□□□□ 0.36
CHRDL2-209ENST00000534276 BAG6P46379 1132 aa17.28■□□□□ 0.36
CHRDL2-209ENST00000534276 BARGINQ6ZT62 677 aa17.28■□□□□ 0.36
CHRDL2-209ENST00000534276 ZNF692Q9BU19 519 aaPredicted RBP17.27■□□□□ 0.35
CHRDL2-209ENST00000534276 TCP11L2Q8N4U5 519 aa17.26■□□□□ 0.35
CHRDL2-209ENST00000534276 LMO7Q8WWI1 1683 aa17.26■□□□□ 0.35
CHRDL2-209ENST00000534276 CARD11Q9BXL7 1154 aa17.25■□□□□ 0.35
CHRDL2-209ENST00000534276 SBNO2Q9Y2G9 1366 aa17.25■□□□□ 0.35
CHRDL2-209ENST00000534276 TTC21BQ7Z4L5 1316 aa17.25■□□□□ 0.35
CHRDL2-209ENST00000534276 SLIT3O75094 1523 aa17.24■□□□□ 0.35
CHRDL2-209ENST00000534276 FAM196AQ6ZSG2 479 aa17.24■□□□□ 0.35
CHRDL2-209ENST00000534276 AATKQ6ZMQ8 1374 aa17.24■□□□□ 0.35
CHRDL2-209ENST00000534276 ZBTB7CA1YPR0 619 aa17.23■□□□□ 0.35
CHRDL2-209ENST00000534276 EN1Q05925 392 aaPredicted RBP17.23■□□□□ 0.35
CHRDL2-209ENST00000534276 THRAP3Q9Y2W1 955 aaKnown RBP17.23■□□□□ 0.35
CHRDL2-209ENST00000534276 COL5A2P05997 1499 aaPredicted RBP17.23■□□□□ 0.35
CHRDL2-209ENST00000534276 CPSF1Q10570 1443 aaKnown RBP17.23■□□□□ 0.35
CHRDL2-209ENST00000534276 PDE3BQ13370 1112 aa17.22■□□□□ 0.35
CHRDL2-209ENST00000534276 TTC21AQ8NDW8 1320 aa17.22■□□□□ 0.35
CHRDL2-209ENST00000534276 DISP2A7MBM2 1401 aa17.21■□□□□ 0.35
CHRDL2-209ENST00000534276 CRB1P82279 1406 aa17.2■□□□□ 0.34
CHRDL2-209ENST00000534276 PIK3C2AO00443 1686 aa17.2■□□□□ 0.34
CHRDL2-209ENST00000534276 KTN1Q86UP2 1357 aaKnown RBP17.2■□□□□ 0.34
CHRDL2-209ENST00000534276 TRIM37O94972 964 aa17.2■□□□□ 0.34
CHRDL2-209ENST00000534276 KCNH5Q8NCM2 988 aa17.2■□□□□ 0.34
CHRDL2-209ENST00000534276 RGPD1P0DJD0 1748 aa17.19■□□□□ 0.34
CHRDL2-209ENST00000534276 ARHGEF25Q86VW2 580 aa17.19■□□□□ 0.34
CHRDL2-209ENST00000534276 AXIN2Q9Y2T1 843 aa17.19■□□□□ 0.34
CHRDL2-209ENST00000534276 PSDA5PKW4 1024 aaPredicted RBP17.17■□□□□ 0.34
CHRDL2-209ENST00000534276 SOX12O15370 315 aa17.17■□□□□ 0.34
CHRDL2-209ENST00000534276 SRCAPQ6ZRS2 3230 aa17.17■□□□□ 0.34
CHRDL2-209ENST00000534276 AKAP12Q02952 1782 aa17.17■□□□□ 0.34
CHRDL2-209ENST00000534276 EZH2Q15910 746 aaKnown RBP17.16■□□□□ 0.34
CHRDL2-209ENST00000534276 TOM1L2Q6ZVM7 507 aa17.16■□□□□ 0.34
CHRDL2-209ENST00000534276 TMC1Q8TDI8 760 aa17.16■□□□□ 0.34
CHRDL2-209ENST00000534276 CAMKK2Q96RR4 588 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms