RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 NUTM2GQ5VZR2 741 aa12.8□□□□□ -0.36
COPB1-211ENST00000534234 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
COPB1-211ENST00000534234 PRDM11Q9NQV5 511 aa12.79□□□□□ -0.36
COPB1-211ENST00000534234 POLR3AO14802 1390 aaPredicted RBP12.78□□□□□ -0.36
COPB1-211ENST00000534234 ARHGEF28Q8N1W1 1705 aaKnown RBP12.78□□□□□ -0.36
COPB1-211ENST00000534234 MARF1Q9Y4F3 1742 aaKnown RBP12.78□□□□□ -0.36
COPB1-211ENST00000534234 A0A0G2JS52 829 aa12.77□□□□□ -0.36
COPB1-211ENST00000534234 MYT1Q01538 1121 aa12.77□□□□□ -0.36
COPB1-211ENST00000534234 ABTB2Q8N961 1025 aa12.77□□□□□ -0.36
COPB1-211ENST00000534234 GLI3P10071 1580 aa12.77□□□□□ -0.36
COPB1-211ENST00000534234 ZC3H6P61129 1189 aaKnown RBP12.77□□□□□ -0.37
COPB1-211ENST00000534234 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.37
COPB1-211ENST00000534234 KIAA1210Q9ULL0 1709 aa12.76□□□□□ -0.37
COPB1-211ENST00000534234 KRT27Q7Z3Y8 459 aa12.76□□□□□ -0.37
COPB1-211ENST00000534234 CABP1Q9NZU7 370 aa12.76□□□□□ -0.37
COPB1-211ENST00000534234 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
COPB1-211ENST00000534234 MSH5O43196 834 aa12.75□□□□□ -0.37
COPB1-211ENST00000534234 CHRNA2Q15822 529 aa12.75□□□□□ -0.37
COPB1-211ENST00000534234 PPIP5K1Q6PFW1 1433 aa12.75□□□□□ -0.37
COPB1-211ENST00000534234 KIAA0232Q92628 1395 aa12.75□□□□□ -0.37
COPB1-211ENST00000534234 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.74□□□□□ -0.37
COPB1-211ENST00000534234 NLRP13Q86W25 1043 aa12.74□□□□□ -0.37
COPB1-211ENST00000534234 ROCK2O75116 1388 aaKnown RBP12.74□□□□□ -0.37
COPB1-211ENST00000534234 ALS2Q96Q42 1657 aa12.74□□□□□ -0.37
COPB1-211ENST00000534234 SPATA31A5Q5VU36 1347 aa12.74□□□□□ -0.37
COPB1-211ENST00000534234 EVC2Q86UK5 1308 aa12.74□□□□□ -0.37
COPB1-211ENST00000534234 SPATA31A7Q8IWB4 1347 aa12.74□□□□□ -0.37
COPB1-211ENST00000534234 ZRANB1Q9UGI0 708 aa12.73□□□□□ -0.37
COPB1-211ENST00000534234 SF3B2Q13435 895 aaKnown RBP12.73□□□□□ -0.37
COPB1-211ENST00000534234 STRN4Q9NRL3 753 aa12.73□□□□□ -0.37
COPB1-211ENST00000534234 BLMP54132 1417 aaPredicted RBP12.72□□□□□ -0.37
COPB1-211ENST00000534234 EVA1CP58658 441 aa12.72□□□□□ -0.37
COPB1-211ENST00000534234 GCP02774 474 aa12.71□□□□□ -0.37
COPB1-211ENST00000534234 DEFB132Q7Z7B7 95 aa12.71□□□□□ -0.37
COPB1-211ENST00000534234 ABCA3Q99758 1704 aa12.71□□□□□ -0.37
COPB1-211ENST00000534234 NWD2Q9ULI1 1742 aa12.71□□□□□ -0.37
COPB1-211ENST00000534234 PLCH1Q4KWH8 1693 aa12.71□□□□□ -0.38
COPB1-211ENST00000534234 NLRP6P59044 892 aa12.7□□□□□ -0.38
COPB1-211ENST00000534234 BRD4O60885 1362 aaPredicted RBP12.7□□□□□ -0.38
COPB1-211ENST00000534234 COL14A1Q05707 1796 aaKnown RBP12.7□□□□□ -0.38
COPB1-211ENST00000534234 USP19O94966 1318 aa12.7□□□□□ -0.38
COPB1-211ENST00000534234 SPATA31A1Q5TZJ5 1347 aa12.7□□□□□ -0.38
COPB1-211ENST00000534234 ITSN1Q15811 1721 aa12.7□□□□□ -0.38
COPB1-211ENST00000534234 TRIM26Q12899 539 aaPredicted RBP12.69□□□□□ -0.38
COPB1-211ENST00000534234 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
COPB1-211ENST00000534234 CARD11Q9BXL7 1154 aa12.69□□□□□ -0.38
COPB1-211ENST00000534234 USP35Q9P2H5 1018 aa12.69□□□□□ -0.38
COPB1-211ENST00000534234 FAM182BQ5T319 152 aa12.69□□□□□ -0.38
COPB1-211ENST00000534234 CPDO75976 1380 aa12.68□□□□□ -0.38
COPB1-211ENST00000534234 USP6P35125 1406 aa12.68□□□□□ -0.38
COPB1-211ENST00000534234 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
COPB1-211ENST00000534234 TOPAZ1Q8N9V7 1692 aa12.67□□□□□ -0.38
COPB1-211ENST00000534234 ZBTB7CA1YPR0 619 aa12.67□□□□□ -0.38
COPB1-211ENST00000534234 LARP1Q6PKG0 1096 aaKnown RBP12.67□□□□□ -0.38
COPB1-211ENST00000534234 BAG6P46379 1132 aa12.66□□□□□ -0.38
COPB1-211ENST00000534234 TRPM1Q7Z4N2 1603 aa12.66□□□□□ -0.38
COPB1-211ENST00000534234 TTC21BQ7Z4L5 1316 aa12.66□□□□□ -0.38
COPB1-211ENST00000534234 NRAPQ86VF7 1730 aa12.66□□□□□ -0.38
COPB1-211ENST00000534234 BARGINQ6ZT62 677 aa12.65□□□□□ -0.38
COPB1-211ENST00000534234 EP400Q96L91 3159 aa12.65□□□□□ -0.38
COPB1-211ENST00000534234 CRYBG1Q9Y4K1 1723 aa12.65□□□□□ -0.38
COPB1-211ENST00000534234 SSH2Q76I76 1423 aa12.65□□□□□ -0.38
COPB1-211ENST00000534234 TCP11L2Q8N4U5 519 aa12.64□□□□□ -0.39
COPB1-211ENST00000534234 QRICH2Q9H0J4 1663 aa12.64□□□□□ -0.39
COPB1-211ENST00000534234 CAMTA1Q9Y6Y1 1673 aa12.64□□□□□ -0.39
COPB1-211ENST00000534234 PDE3BQ13370 1112 aa12.64□□□□□ -0.39
COPB1-211ENST00000534234 FAM196AQ6ZSG2 479 aa12.64□□□□□ -0.39
COPB1-211ENST00000534234 EN1Q05925 392 aaPredicted RBP12.63□□□□□ -0.39
COPB1-211ENST00000534234 THRAP3Q9Y2W1 955 aaKnown RBP12.63□□□□□ -0.39
COPB1-211ENST00000534234 BRWD3Q6RI45 1802 aa12.62□□□□□ -0.39
COPB1-211ENST00000534234 PHRF1Q9P1Y6 1649 aaKnown RBP12.62□□□□□ -0.39
COPB1-211ENST00000534234 KCNH5Q8NCM2 988 aa12.62□□□□□ -0.39
COPB1-211ENST00000534234 TMC1Q8TDI8 760 aa12.62□□□□□ -0.39
COPB1-211ENST00000534234 TTC21AQ8NDW8 1320 aa12.62□□□□□ -0.39
COPB1-211ENST00000534234 AATKQ6ZMQ8 1374 aa12.62□□□□□ -0.39
COPB1-211ENST00000534234 KTN1Q86UP2 1357 aaKnown RBP12.62□□□□□ -0.39
COPB1-211ENST00000534234 SBNO2Q9Y2G9 1366 aa12.62□□□□□ -0.39
COPB1-211ENST00000534234 SOX12O15370 315 aa12.61□□□□□ -0.39
COPB1-211ENST00000534234 TRIM37O94972 964 aa12.61□□□□□ -0.39
COPB1-211ENST00000534234 ARHGEF25Q86VW2 580 aa12.61□□□□□ -0.39
COPB1-211ENST00000534234 AXIN2Q9Y2T1 843 aa12.61□□□□□ -0.39
COPB1-211ENST00000534234 CPSF1Q10570 1443 aaKnown RBP12.61□□□□□ -0.39
COPB1-211ENST00000534234 NRKQ7Z2Y5 1582 aa12.61□□□□□ -0.39
COPB1-211ENST00000534234 TOM1L2Q6ZVM7 507 aa12.6□□□□□ -0.39
COPB1-211ENST00000534234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.6□□□□□ -0.39
COPB1-211ENST00000534234 SLC12A5Q9H2X9 1139 aa12.6□□□□□ -0.39
COPB1-211ENST00000534234 COL5A2P05997 1499 aaPredicted RBP12.6□□□□□ -0.39
COPB1-211ENST00000534234 HDGFL2Q7Z4V5 671 aaPredicted RBP12.59□□□□□ -0.39
COPB1-211ENST00000534234 THSD7AQ9UPZ6 1657 aa12.58□□□□□ -0.4
COPB1-211ENST00000534234 CRB1P82279 1406 aa12.58□□□□□ -0.4
COPB1-211ENST00000534234 ST20-MTHFSA0A0A6YYL1 179 aa12.58□□□□□ -0.4
COPB1-211ENST00000534234 APBA3O96018 575 aa12.58□□□□□ -0.4
COPB1-211ENST00000534234 PUS7Q96PZ0 661 aaKnown RBP12.58□□□□□ -0.4
COPB1-211ENST00000534234 SLIT3O75094 1523 aa12.58□□□□□ -0.4
COPB1-211ENST00000534234 WDR17Q8IZU2 1322 aa12.57□□□□□ -0.4
COPB1-211ENST00000534234 PSDA5PKW4 1024 aaPredicted RBP12.57□□□□□ -0.4
COPB1-211ENST00000534234 EZH2Q15910 746 aaKnown RBP12.57□□□□□ -0.4
COPB1-211ENST00000534234 TERF2IPQ9NYB0 399 aa12.57□□□□□ -0.4
COPB1-211ENST00000534234 LMO7Q8WWI1 1683 aa12.56□□□□□ -0.4
COPB1-211ENST00000534234 SLC24A1O60721 1099 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms