RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 PSME1Q06323 249 aa12.67□□□□□ -0.38
RTL1-201ENST00000534062 CPS1P31327 1500 aa12.66□□□□□ -0.38
RTL1-201ENST00000534062 U2AF1L5P0DN76 240 aaPredicted RBP12.66□□□□□ -0.38
RTL1-201ENST00000534062 U2AF1Q01081 240 aaKnown RBP eCLIP12.66□□□□□ -0.38
RTL1-201ENST00000534062 IL27Q8NEV9 243 aa12.66□□□□□ -0.38
RTL1-201ENST00000534062 FOXO3O43524 673 aa12.66□□□□□ -0.38
RTL1-201ENST00000534062 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
RTL1-201ENST00000534062 ZNF142P52746 1687 aaPredicted RBP12.65□□□□□ -0.38
RTL1-201ENST00000534062 PTCH1Q13635 1447 aa12.65□□□□□ -0.38
RTL1-201ENST00000534062 RRS1Q15050 365 aaKnown RBP12.65□□□□□ -0.38
RTL1-201ENST00000534062 DIP2AQ14689 1571 aa12.65□□□□□ -0.39
RTL1-201ENST00000534062 NLRP6P59044 892 aa12.64□□□□□ -0.39
RTL1-201ENST00000534062 ABTB2Q8N961 1025 aa12.64□□□□□ -0.39
RTL1-201ENST00000534062 ORAI2Q96SN7 254 aa12.64□□□□□ -0.39
RTL1-201ENST00000534062 RTN4Q9NQC3 1192 aaKnown RBP12.63□□□□□ -0.39
RTL1-201ENST00000534062 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
RTL1-201ENST00000534062 NPC1L1Q9UHC9 1359 aa12.63□□□□□ -0.39
RTL1-201ENST00000534062 ZNF335Q9H4Z2 1342 aaPredicted RBP12.63□□□□□ -0.39
RTL1-201ENST00000534062 TTC21BQ7Z4L5 1316 aa12.63□□□□□ -0.39
RTL1-201ENST00000534062 TMEM94Q12767 1356 aa12.63□□□□□ -0.39
RTL1-201ENST00000534062 C19orf44Q9H6X5 657 aa12.62□□□□□ -0.39
RTL1-201ENST00000534062 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.62□□□□□ -0.39
RTL1-201ENST00000534062 ATP7BP35670 1465 aa12.62□□□□□ -0.39
RTL1-201ENST00000534062 EMILIN1Q9Y6C2 1016 aa12.62□□□□□ -0.39
RTL1-201ENST00000534062 NSD2O96028 1365 aa12.62□□□□□ -0.39
RTL1-201ENST00000534062 PLEKHG3A1L390 1219 aa12.61□□□□□ -0.39
RTL1-201ENST00000534062 KNDC1Q76NI1 1749 aa12.6□□□□□ -0.39
RTL1-201ENST00000534062 NEFMP07197 916 aa12.6□□□□□ -0.39
RTL1-201ENST00000534062 RRP7AQ9Y3A4 280 aaKnown RBP12.6□□□□□ -0.39
RTL1-201ENST00000534062 EDC4Q6P2E9 1401 aaKnown RBP12.6□□□□□ -0.39
RTL1-201ENST00000534062 NBR1Q14596 966 aa12.6□□□□□ -0.39
RTL1-201ENST00000534062 APAF1O14727 1248 aa12.6□□□□□ -0.39
RTL1-201ENST00000534062 AEBP2Q6ZN18 517 aaPredicted RBP12.59□□□□□ -0.39
RTL1-201ENST00000534062 ZBED9Q6R2W3 1325 aa12.59□□□□□ -0.39
RTL1-201ENST00000534062 CD163L1Q9NR16 1453 aa12.59□□□□□ -0.39
RTL1-201ENST00000534062 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
RTL1-201ENST00000534062 AMPHP49418 695 aa12.59□□□□□ -0.39
RTL1-201ENST00000534062 DDX17Q92841 729 aaKnown RBP12.59□□□□□ -0.39
RTL1-201ENST00000534062 LTV1Q96GA3 475 aaPredicted RBP12.59□□□□□ -0.39
RTL1-201ENST00000534062 LMTK3Q96Q04 1460 aa12.58□□□□□ -0.39
RTL1-201ENST00000534062 ADGRL3Q9HAR2 1447 aa12.58□□□□□ -0.4
RTL1-201ENST00000534062 MSH6P52701 1360 aa12.58□□□□□ -0.4
RTL1-201ENST00000534062 IRX6P78412 446 aaPredicted RBP12.57□□□□□ -0.4
RTL1-201ENST00000534062 CADPS2Q86UW7 1296 aa12.57□□□□□ -0.4
RTL1-201ENST00000534062 DMRT2Q9Y5R5 561 aa12.57□□□□□ -0.4
RTL1-201ENST00000534062 MAPK8IP3Q9UPT6 1336 aa12.57□□□□□ -0.4
RTL1-201ENST00000534062 HMOX1P09601 288 aa12.57□□□□□ -0.4
RTL1-201ENST00000534062 EIF5BO60841 1220 aaKnown RBP12.56□□□□□ -0.4
RTL1-201ENST00000534062 CPSF1Q10570 1443 aaKnown RBP12.56□□□□□ -0.4
RTL1-201ENST00000534062 POLKQ9UBT6 870 aa12.56□□□□□ -0.4
RTL1-201ENST00000534062 USP6P35125 1406 aa12.56□□□□□ -0.4
RTL1-201ENST00000534062 XRN1Q8IZH2 1706 aaKnown RBP12.56□□□□□ -0.4
RTL1-201ENST00000534062 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
RTL1-201ENST00000534062 CHD2O14647 1828 aaKnown RBP12.55□□□□□ -0.4
RTL1-201ENST00000534062 NKTRP30414 1462 aaKnown RBP12.55□□□□□ -0.4
RTL1-201ENST00000534062 KRT28Q7Z3Y7 464 aa12.55□□□□□ -0.4
RTL1-201ENST00000534062 CDC42BPGQ6DT37 1551 aa12.54□□□□□ -0.4
RTL1-201ENST00000534062 TTC21AQ8NDW8 1320 aa12.54□□□□□ -0.4
RTL1-201ENST00000534062 POLR3AO14802 1390 aaPredicted RBP12.53□□□□□ -0.4
RTL1-201ENST00000534062 CDCA7LQ96GN5 454 aa12.53□□□□□ -0.4
RTL1-201ENST00000534062 RGPD8O14715 1765 aaPredicted RBP12.53□□□□□ -0.4
RTL1-201ENST00000534062 ANKARQ7Z5J8 1434 aa12.53□□□□□ -0.4
RTL1-201ENST00000534062 PKNOX2Q96KN3 472 aa12.52□□□□□ -0.4
RTL1-201ENST00000534062 TCP11L2Q8N4U5 519 aa12.52□□□□□ -0.41
RTL1-201ENST00000534062 RUNDC1Q96C34 613 aa12.52□□□□□ -0.41
RTL1-201ENST00000534062 HSP90AB2PQ58FF8 381 aa12.51□□□□□ -0.41
RTL1-201ENST00000534062 ITSN1Q15811 1721 aa12.51□□□□□ -0.41
RTL1-201ENST00000534062 ADGRB2O60241 1585 aa12.51□□□□□ -0.41
RTL1-201ENST00000534062 PRKAR2BP31323 418 aa12.5□□□□□ -0.41
RTL1-201ENST00000534062 NALCNQ8IZF0 1738 aa12.5□□□□□ -0.41
RTL1-201ENST00000534062 ZC3H6P61129 1189 aaKnown RBP12.5□□□□□ -0.41
RTL1-201ENST00000534062 CANXP27824 592 aaKnown RBP12.49□□□□□ -0.41
RTL1-201ENST00000534062 MAP3K19Q56UN5 1328 aa12.49□□□□□ -0.41
RTL1-201ENST00000534062 CABLES1Q8TDN4 633 aa12.49□□□□□ -0.41
RTL1-201ENST00000534062 SLAIN2Q9P270 581 aa12.49□□□□□ -0.41
RTL1-201ENST00000534062 LAS1LQ9Y4W2 734 aaKnown RBP12.49□□□□□ -0.41
RTL1-201ENST00000534062 GOLGA2Q08379 1002 aa12.48□□□□□ -0.41
RTL1-201ENST00000534062 SULT6B1Q6IMI4 303 aa12.48□□□□□ -0.41
RTL1-201ENST00000534062 PNNQ9H307 717 aaKnown RBP12.48□□□□□ -0.41
RTL1-201ENST00000534062 C1orf167Q5SNV9 1468 aa12.48□□□□□ -0.41
RTL1-201ENST00000534062 NPHP3Q7Z494 1330 aa12.47□□□□□ -0.41
RTL1-201ENST00000534062 PIP4K2BP78356 416 aa12.47□□□□□ -0.41
RTL1-201ENST00000534062 NOP58Q9Y2X3 529 aaKnown RBP12.47□□□□□ -0.41
RTL1-201ENST00000534062 USP32Q8NFA0 1604 aa12.47□□□□□ -0.41
RTL1-201ENST00000534062 KIF20BQ96Q89 1820 aa12.47□□□□□ -0.41
RTL1-201ENST00000534062 RIPK4P57078 832 aa12.46□□□□□ -0.41
RTL1-201ENST00000534062 EIF4A2Q14240 407 aaKnown RBP12.46□□□□□ -0.42
RTL1-201ENST00000534062 FMN2Q9NZ56 1722 aa12.46□□□□□ -0.42
RTL1-201ENST00000534062 AEBP1Q8IUX7 1158 aa12.45□□□□□ -0.42
RTL1-201ENST00000534062 CSB-PGBD3P0DP91 1061 aa12.45□□□□□ -0.42
RTL1-201ENST00000534062 GCP02774 474 aa12.44□□□□□ -0.42
RTL1-201ENST00000534062 PDE3BQ13370 1112 aa12.44□□□□□ -0.42
RTL1-201ENST00000534062 BRINP3Q76B58 766 aa12.44□□□□□ -0.42
RTL1-201ENST00000534062 USHBP1Q8N6Y0 703 aa12.44□□□□□ -0.42
RTL1-201ENST00000534062 BLMP54132 1417 aaPredicted RBP12.44□□□□□ -0.42
RTL1-201ENST00000534062 KCNH5Q8NCM2 988 aa12.44□□□□□ -0.42
RTL1-201ENST00000534062 MAP2P11137 1827 aaKnown RBP12.43□□□□□ -0.42
RTL1-201ENST00000534062 FCHSD2O94868 740 aa12.43□□□□□ -0.42
RTL1-201ENST00000534062 IL13P35225 146 aa12.43□□□□□ -0.42
RTL1-201ENST00000534062 STRCQ7RTU9 1775 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms