RNA–Protein interactions for RNA: ENST00000534018.5

GSDMD-215, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-215ENST00000534018 MYT1Q01538 1121 aa24.21■■□□□ 1.47
GSDMD-215ENST00000534018 PHRF1Q9P1Y6 1649 aaKnown RBP24.21■■□□□ 1.47
GSDMD-215ENST00000534018 ONECUT3O60422 494 aaPredicted RBP24.2■■□□□ 1.46
GSDMD-215ENST00000534018 SF3B2Q13435 895 aaKnown RBP24.2■■□□□ 1.46
GSDMD-215ENST00000534018 KRT27Q7Z3Y8 459 aa24.2■■□□□ 1.46
GSDMD-215ENST00000534018 BTG4Q9NY30 223 aa24.2■■□□□ 1.46
GSDMD-215ENST00000534018 ATP7BP35670 1465 aa24.19■■□□□ 1.46
GSDMD-215ENST00000534018 TOPAZ1Q8N9V7 1692 aa24.19■■□□□ 1.46
GSDMD-215ENST00000534018 NGDNQ8NEJ9 315 aaKnown RBP24.19■■□□□ 1.46
GSDMD-215ENST00000534018 PAK3O75914 559 aaPredicted RBP24.18■■□□□ 1.46
GSDMD-215ENST00000534018 FAM98CQ17RN3 349 aaKnown RBP24.17■■□□□ 1.46
GSDMD-215ENST00000534018 RGPD1P0DJD0 1748 aa24.17■■□□□ 1.46
GSDMD-215ENST00000534018 KIAA1210Q9ULL0 1709 aa24.17■■□□□ 1.46
GSDMD-215ENST00000534018 STAC3Q96MF2 364 aa24.16■■□□□ 1.46
GSDMD-215ENST00000534018 THSD7AQ9UPZ6 1657 aa24.15■■□□□ 1.46
GSDMD-215ENST00000534018 TNS1Q9HBL0 1735 aaKnown RBP24.11■■□□□ 1.45
GSDMD-215ENST00000534018 NUDT16Q96DE0 195 aaKnown RBP24.11■■□□□ 1.45
GSDMD-215ENST00000534018 PRDM11Q9NQV5 511 aa24.1■■□□□ 1.45
GSDMD-215ENST00000534018 SPATA31A5Q5VU36 1347 aa24.1■■□□□ 1.45
GSDMD-215ENST00000534018 SPATA31A7Q8IWB4 1347 aa24.1■■□□□ 1.45
GSDMD-215ENST00000534018 LRP5O75197 1615 aa24.09■■□□□ 1.45
GSDMD-215ENST00000534018 KIAA0232Q92628 1395 aa24.08■■□□□ 1.45
GSDMD-215ENST00000534018 FAM182BQ5T319 152 aa24.07■■□□□ 1.44
GSDMD-215ENST00000534018 CDK19Q9BWU1 502 aa24.07■■□□□ 1.44
GSDMD-215ENST00000534018 NRKQ7Z2Y5 1582 aa24.07■■□□□ 1.44
GSDMD-215ENST00000534018 BAG6P46379 1132 aa24.06■■□□□ 1.44
GSDMD-215ENST00000534018 NUTM2GQ5VZR2 741 aa24.06■■□□□ 1.44
GSDMD-215ENST00000534018 CHRNA2Q15822 529 aa24.05■■□□□ 1.44
GSDMD-215ENST00000534018 POLR3AO14802 1390 aaPredicted RBP24.04■■□□□ 1.44
GSDMD-215ENST00000534018 QRICH2Q9H0J4 1663 aa24.04■■□□□ 1.44
GSDMD-215ENST00000534018 ACEP12821 1306 aa24.03■■□□□ 1.44
GSDMD-215ENST00000534018 ZC3H6P61129 1189 aaKnown RBP24.02■■□□□ 1.44
GSDMD-215ENST00000534018 STRN4Q9NRL3 753 aa24.02■■□□□ 1.44
GSDMD-215ENST00000534018 PSDA5PKW4 1024 aaPredicted RBP24.01■■□□□ 1.43
GSDMD-215ENST00000534018 SPATA31A1Q5TZJ5 1347 aa24.01■■□□□ 1.43
GSDMD-215ENST00000534018 LMO7Q8WWI1 1683 aa24■■□□□ 1.43
GSDMD-215ENST00000534018 CCDC61Q9Y6R9 512 aa24■■□□□ 1.43
GSDMD-215ENST00000534018 EN1Q05925 392 aaPredicted RBP23.99■■□□□ 1.43
GSDMD-215ENST00000534018 NBPF1Q3BBV0 1214 aa23.99■■□□□ 1.43
GSDMD-215ENST00000534018 NBPF8Q3BBV2 869 aa23.99■■□□□ 1.43
GSDMD-215ENST00000534018 USP35Q9P2H5 1018 aa23.97■■□□□ 1.43
GSDMD-215ENST00000534018 CAMTA1Q9Y6Y1 1673 aa23.96■■□□□ 1.43
GSDMD-215ENST00000534018 PPIP5K1Q6PFW1 1433 aa23.96■■□□□ 1.43
GSDMD-215ENST00000534018 SSH2Q76I76 1423 aa23.96■■□□□ 1.43
GSDMD-215ENST00000534018 PLEKHG3A1L390 1219 aa23.96■■□□□ 1.43
GSDMD-215ENST00000534018 DISP2A7MBM2 1401 aa23.95■■□□□ 1.42
GSDMD-215ENST00000534018 ABTB2Q8N961 1025 aa23.95■■□□□ 1.42
GSDMD-215ENST00000534018 SRPK2P78362 688 aaKnown RBP23.94■■□□□ 1.42
GSDMD-215ENST00000534018 CENPJQ9HC77 1338 aaPredicted RBP23.92■■□□□ 1.42
GSDMD-215ENST00000534018 EVA1CP58658 441 aa23.92■■□□□ 1.42
GSDMD-215ENST00000534018 RREB1Q92766 1687 aa23.92■■□□□ 1.42
GSDMD-215ENST00000534018 USP19O94966 1318 aa23.91■■□□□ 1.42
GSDMD-215ENST00000534018 TRIM37O94972 964 aa23.91■■□□□ 1.42
GSDMD-215ENST00000534018 CABP2Q9NPB3 220 aa23.91■■□□□ 1.42
GSDMD-215ENST00000534018 CPDO75976 1380 aa23.91■■□□□ 1.42
GSDMD-215ENST00000534018 PARP4Q9UKK3 1724 aaKnown RBP23.9■■□□□ 1.42
GSDMD-215ENST00000534018 EZH2Q15910 746 aaKnown RBP23.9■■□□□ 1.42
GSDMD-215ENST00000534018 TRPM1Q7Z4N2 1603 aa23.9■■□□□ 1.42
GSDMD-215ENST00000534018 R3HDM1Q15032 1099 aaKnown RBP23.89■■□□□ 1.41
GSDMD-215ENST00000534018 LARP1Q6PKG0 1096 aaKnown RBP23.89■■□□□ 1.41
GSDMD-215ENST00000534018 FAM196AQ6ZSG2 479 aa23.89■■□□□ 1.41
GSDMD-215ENST00000534018 NUP188Q5SRE5 1749 aa23.89■■□□□ 1.41
GSDMD-215ENST00000534018 PIK3C2AO00443 1686 aa23.87■■□□□ 1.41
GSDMD-215ENST00000534018 BARGINQ6ZT62 677 aa23.87■■□□□ 1.41
GSDMD-215ENST00000534018 COL5A2P05997 1499 aaPredicted RBP23.87■■□□□ 1.41
GSDMD-215ENST00000534018 NLRP13Q86W25 1043 aa23.86■■□□□ 1.41
GSDMD-215ENST00000534018 WNK3Q9BYP7 1800 aa23.86■■□□□ 1.41
GSDMD-215ENST00000534018 GCP02774 474 aa23.85■■□□□ 1.41
GSDMD-215ENST00000534018 PDE3BQ13370 1112 aa23.85■■□□□ 1.41
GSDMD-215ENST00000534018 USP6P35125 1406 aa23.84■■□□□ 1.41
GSDMD-215ENST00000534018 AKAP12Q02952 1782 aa23.84■■□□□ 1.41
GSDMD-215ENST00000534018 APBA3O96018 575 aa23.84■■□□□ 1.41
GSDMD-215ENST00000534018 TCP11L2Q8N4U5 519 aa23.84■■□□□ 1.41
GSDMD-215ENST00000534018 CAMKK2Q96RR4 588 aa23.84■■□□□ 1.41
GSDMD-215ENST00000534018 SLIT3O75094 1523 aa23.84■■□□□ 1.41
GSDMD-215ENST00000534018 ZBTB7CA1YPR0 619 aa23.83■■□□□ 1.41
GSDMD-215ENST00000534018 LRRC37A3O60309 1634 aa23.83■■□□□ 1.41
GSDMD-215ENST00000534018 RGPD5Q99666 1765 aa23.83■■□□□ 1.4
GSDMD-215ENST00000534018 CABP1Q9NZU7 370 aa23.82■■□□□ 1.4
GSDMD-215ENST00000534018 COL18A1P39060 1754 aa23.82■■□□□ 1.4
GSDMD-215ENST00000534018 SBF2Q86WG5 1849 aa23.82■■□□□ 1.4
GSDMD-215ENST00000534018 BRD4O60885 1362 aaPredicted RBP23.81■■□□□ 1.4
GSDMD-215ENST00000534018 PARD3Q8TEW0 1356 aa23.8■■□□□ 1.4
GSDMD-215ENST00000534018 CRB1P82279 1406 aa23.8■■□□□ 1.4
GSDMD-215ENST00000534018 L3MBTL2Q969R5 705 aa23.8■■□□□ 1.4
GSDMD-215ENST00000534018 PEAK1Q9H792 1746 aa23.8■■□□□ 1.4
GSDMD-215ENST00000534018 NLRP6P59044 892 aa23.79■■□□□ 1.4
GSDMD-215ENST00000534018 THRAP3Q9Y2W1 955 aaKnown RBP23.79■■□□□ 1.4
GSDMD-215ENST00000534018 EVC2Q86UK5 1308 aa23.76■■□□□ 1.39
GSDMD-215ENST00000534018 AATKQ6ZMQ8 1374 aa23.75■■□□□ 1.39
GSDMD-215ENST00000534018 RGPD3A6NKT7 1758 aaPredicted RBP23.75■■□□□ 1.39
GSDMD-215ENST00000534018 RGPD4Q7Z3J3 1758 aa23.75■■□□□ 1.39
GSDMD-215ENST00000534018 SIN3AQ96ST3 1273 aa23.74■■□□□ 1.39
GSDMD-215ENST00000534018 ROCK2O75116 1388 aaKnown RBP23.73■■□□□ 1.39
GSDMD-215ENST00000534018 OVOS2A0A0G2JMS6 1433 aa23.73■■□□□ 1.39
GSDMD-215ENST00000534018 OVOS2A0A0J9YW53 1432 aa23.73■■□□□ 1.39
GSDMD-215ENST00000534018 OVOS2Q6IE36 1432 aa23.73■■□□□ 1.39
GSDMD-215ENST00000534018 MON2Q7Z3U7 1717 aa23.73■■□□□ 1.39
GSDMD-215ENST00000534018 CPSF1Q10570 1443 aaKnown RBP23.71■■□□□ 1.39
GSDMD-215ENST00000534018 NEUROD1Q13562 356 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms