RNA–Protein interactions for RNA: ENST00000533989.5

MS4A6A-220, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-220ENST00000533989 CCDC125Q86Z20 511 aa11.61□□□□□ -0.55
MS4A6A-220ENST00000533989 ARHGEF10O15013 1369 aa11.61□□□□□ -0.55
MS4A6A-220ENST00000533989 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.6□□□□□ -0.55
MS4A6A-220ENST00000533989 EIF3AQ14152 1382 aaKnown RBP11.6□□□□□ -0.55
MS4A6A-220ENST00000533989 POGKQ9P215 609 aa11.6□□□□□ -0.55
MS4A6A-220ENST00000533989 MARF1Q9Y4F3 1742 aaKnown RBP11.6□□□□□ -0.55
MS4A6A-220ENST00000533989 RALGAPBQ86X10 1494 aa11.59□□□□□ -0.55
MS4A6A-220ENST00000533989 USP32Q8NFA0 1604 aa11.59□□□□□ -0.55
MS4A6A-220ENST00000533989 ONECUT3O60422 494 aaPredicted RBP11.58□□□□□ -0.56
MS4A6A-220ENST00000533989 VPS72Q15906 364 aa11.58□□□□□ -0.56
MS4A6A-220ENST00000533989 SAFB2Q14151 953 aaKnown RBP eCLIP11.57□□□□□ -0.56
MS4A6A-220ENST00000533989 DCAF11Q8TEB1 546 aa11.57□□□□□ -0.56
MS4A6A-220ENST00000533989 WASLO00401 505 aaPredicted RBP11.56□□□□□ -0.56
MS4A6A-220ENST00000533989 GLI3P10071 1580 aa11.56□□□□□ -0.56
MS4A6A-220ENST00000533989 TRAK1Q9UPV9 953 aa11.56□□□□□ -0.56
MS4A6A-220ENST00000533989 PRR36Q9H6K5 1346 aa11.56□□□□□ -0.56
MS4A6A-220ENST00000533989 TULP4Q9NRJ4 1543 aa11.55□□□□□ -0.56
MS4A6A-220ENST00000533989 CABLES1Q8TDN4 633 aa11.55□□□□□ -0.56
MS4A6A-220ENST00000533989 GPRASP1Q5JY77 1395 aa11.54□□□□□ -0.56
MS4A6A-220ENST00000533989 HAP1P54257 671 aaPredicted RBP11.54□□□□□ -0.56
MS4A6A-220ENST00000533989 PMFBP1Q8TBY8 1022 aa11.54□□□□□ -0.56
MS4A6A-220ENST00000533989 KDM2AQ9Y2K7 1162 aa11.54□□□□□ -0.56
MS4A6A-220ENST00000533989 BLMP54132 1417 aaPredicted RBP11.53□□□□□ -0.56
MS4A6A-220ENST00000533989 NWD2Q9ULI1 1742 aa11.53□□□□□ -0.56
MS4A6A-220ENST00000533989 FAM83GA6ND36 823 aa11.53□□□□□ -0.56
MS4A6A-220ENST00000533989 HIRIP3Q9BW71 556 aaPredicted RBP11.53□□□□□ -0.56
MS4A6A-220ENST00000533989 MINK1Q8N4C8 1332 aaPredicted RBP11.53□□□□□ -0.56
MS4A6A-220ENST00000533989 TRPM3Q9HCF6 1732 aaPredicted RBP11.52□□□□□ -0.56
MS4A6A-220ENST00000533989 RGPD8O14715 1765 aaPredicted RBP11.52□□□□□ -0.57
MS4A6A-220ENST00000533989 SEPT12Q8IYM1 358 aa11.52□□□□□ -0.57
MS4A6A-220ENST00000533989 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.57
MS4A6A-220ENST00000533989 ABCA3Q99758 1704 aa11.52□□□□□ -0.57
MS4A6A-220ENST00000533989 ATP7BP35670 1465 aa11.51□□□□□ -0.57
MS4A6A-220ENST00000533989 FKBP8Q14318 412 aa11.51□□□□□ -0.57
MS4A6A-220ENST00000533989 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
MS4A6A-220ENST00000533989 PLCH1Q4KWH8 1693 aa11.5□□□□□ -0.57
MS4A6A-220ENST00000533989 ALS2Q96Q42 1657 aa11.5□□□□□ -0.57
MS4A6A-220ENST00000533989 NGDNQ8NEJ9 315 aaKnown RBP11.49□□□□□ -0.57
MS4A6A-220ENST00000533989 NUDT16Q96DE0 195 aaKnown RBP11.49□□□□□ -0.57
MS4A6A-220ENST00000533989 POLR3AO14802 1390 aaPredicted RBP11.49□□□□□ -0.57
MS4A6A-220ENST00000533989 KRT27Q7Z3Y8 459 aa11.48□□□□□ -0.57
MS4A6A-220ENST00000533989 BTG4Q9NY30 223 aa11.48□□□□□ -0.57
MS4A6A-220ENST00000533989 COL14A1Q05707 1796 aaKnown RBP11.47□□□□□ -0.57
MS4A6A-220ENST00000533989 ARHGEF28Q8N1W1 1705 aaKnown RBP11.47□□□□□ -0.57
MS4A6A-220ENST00000533989 KIAA1210Q9ULL0 1709 aa11.47□□□□□ -0.57
MS4A6A-220ENST00000533989 SPATA31A5Q5VU36 1347 aa11.47□□□□□ -0.57
MS4A6A-220ENST00000533989 SPATA31A7Q8IWB4 1347 aa11.47□□□□□ -0.57
MS4A6A-220ENST00000533989 PLEKHG3A1L390 1219 aa11.47□□□□□ -0.57
MS4A6A-220ENST00000533989 CDK19Q9BWU1 502 aa11.47□□□□□ -0.57
MS4A6A-220ENST00000533989 CCDC61Q9Y6R9 512 aa11.47□□□□□ -0.57
MS4A6A-220ENST00000533989 NRAPQ86VF7 1730 aa11.46□□□□□ -0.57
MS4A6A-220ENST00000533989 CCDC9Q9Y3X0 531 aaKnown RBP11.46□□□□□ -0.57
MS4A6A-220ENST00000533989 SF3B2Q13435 895 aaKnown RBP11.45□□□□□ -0.58
MS4A6A-220ENST00000533989 LHX8Q68G74 356 aa11.45□□□□□ -0.58
MS4A6A-220ENST00000533989 PRDM11Q9NQV5 511 aa11.45□□□□□ -0.58
MS4A6A-220ENST00000533989 CRYBG1Q9Y4K1 1723 aa11.45□□□□□ -0.58
MS4A6A-220ENST00000533989 ITSN1Q15811 1721 aa11.44□□□□□ -0.58
MS4A6A-220ENST00000533989 ACEP12821 1306 aa11.44□□□□□ -0.58
MS4A6A-220ENST00000533989 C19orf67A6NJJ6 358 aa11.44□□□□□ -0.58
MS4A6A-220ENST00000533989 PAK3O75914 559 aaPredicted RBP11.44□□□□□ -0.58
MS4A6A-220ENST00000533989 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
MS4A6A-220ENST00000533989 FAM98CQ17RN3 349 aaKnown RBP11.44□□□□□ -0.58
MS4A6A-220ENST00000533989 NBPF8Q3BBV2 869 aa11.44□□□□□ -0.58
MS4A6A-220ENST00000533989 BRWD3Q6RI45 1802 aa11.44□□□□□ -0.58
MS4A6A-220ENST00000533989 BRD4O60885 1362 aaPredicted RBP11.43□□□□□ -0.58
MS4A6A-220ENST00000533989 CPDO75976 1380 aa11.43□□□□□ -0.58
MS4A6A-220ENST00000533989 KIAA0232Q92628 1395 aa11.43□□□□□ -0.58
MS4A6A-220ENST00000533989 MKRN4PQ13434 485 aaPredicted RBP11.43□□□□□ -0.58
MS4A6A-220ENST00000533989 NBPF1Q3BBV0 1214 aa11.43□□□□□ -0.58
MS4A6A-220ENST00000533989 DEFB132Q7Z7B7 95 aa11.43□□□□□ -0.58
MS4A6A-220ENST00000533989 TOPAZ1Q8N9V7 1692 aa11.43□□□□□ -0.58
MS4A6A-220ENST00000533989 THSD7AQ9UPZ6 1657 aa11.43□□□□□ -0.58
MS4A6A-220ENST00000533989 USP19O94966 1318 aa11.42□□□□□ -0.58
MS4A6A-220ENST00000533989 SPATA31A1Q5TZJ5 1347 aa11.42□□□□□ -0.58
MS4A6A-220ENST00000533989 DISP2A7MBM2 1401 aa11.42□□□□□ -0.58
MS4A6A-220ENST00000533989 CENPJQ9HC77 1338 aaPredicted RBP11.41□□□□□ -0.58
MS4A6A-220ENST00000533989 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
MS4A6A-220ENST00000533989 BAG6P46379 1132 aa11.41□□□□□ -0.58
MS4A6A-220ENST00000533989 A0A0G2JS52 829 aa11.4□□□□□ -0.58
MS4A6A-220ENST00000533989 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
MS4A6A-220ENST00000533989 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
MS4A6A-220ENST00000533989 MYT1Q01538 1121 aa11.4□□□□□ -0.58
MS4A6A-220ENST00000533989 SPDYE2Q495Y8 402 aa11.4□□□□□ -0.58
MS4A6A-220ENST00000533989 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
MS4A6A-220ENST00000533989 PHRF1Q9P1Y6 1649 aaKnown RBP11.39□□□□□ -0.59
MS4A6A-220ENST00000533989 ABTB2Q8N961 1025 aa11.39□□□□□ -0.59
MS4A6A-220ENST00000533989 NRKQ7Z2Y5 1582 aa11.38□□□□□ -0.59
MS4A6A-220ENST00000533989 PPIP5K1Q6PFW1 1433 aa11.38□□□□□ -0.59
MS4A6A-220ENST00000533989 SSH2Q76I76 1423 aa11.38□□□□□ -0.59
MS4A6A-220ENST00000533989 ZC3H6P61129 1189 aaKnown RBP11.38□□□□□ -0.59
MS4A6A-220ENST00000533989 SRPK2P78362 688 aaKnown RBP11.38□□□□□ -0.59
MS4A6A-220ENST00000533989 CHRNA2Q15822 529 aa11.38□□□□□ -0.59
MS4A6A-220ENST00000533989 NLRP13Q86W25 1043 aa11.38□□□□□ -0.59
MS4A6A-220ENST00000533989 GABBR2O75899 941 aa11.37□□□□□ -0.59
MS4A6A-220ENST00000533989 GCP02774 474 aa11.37□□□□□ -0.59
MS4A6A-220ENST00000533989 NUTM2GQ5VZR2 741 aa11.37□□□□□ -0.59
MS4A6A-220ENST00000533989 FAM196AQ6ZSG2 479 aa11.37□□□□□ -0.59
MS4A6A-220ENST00000533989 L3MBTL2Q969R5 705 aa11.37□□□□□ -0.59
MS4A6A-220ENST00000533989 CAMTA1Q9Y6Y1 1673 aa11.36□□□□□ -0.59
MS4A6A-220ENST00000533989 USP6P35125 1406 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms