RNA–Protein interactions for RNA: ENST00000533777.5

CTSH-213, Transcript of cathepsin H, humanhuman

TSL 1 (best)

Gene CTSH, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSH-213ENST00000533777 IL16Q14005 1332 aa22.41■■□□□ 1.18
CTSH-213ENST00000533777 MINK1Q8N4C8 1332 aaPredicted RBP22.41■■□□□ 1.18
CTSH-213ENST00000533777 KIF20BQ96Q89 1820 aa22.4■■□□□ 1.18
CTSH-213ENST00000533777 ARHGEF40Q8TER5 1519 aa22.4■■□□□ 1.18
CTSH-213ENST00000533777 U2SURPO15042 1029 aaKnown RBP22.4■■□□□ 1.18
CTSH-213ENST00000533777 PNPLA6Q8IY17 1366 aa22.39■■□□□ 1.18
CTSH-213ENST00000533777 HDGFL2Q7Z4V5 671 aaPredicted RBP22.39■■□□□ 1.17
CTSH-213ENST00000533777 TRIM35Q9UPQ4 493 aa22.39■■□□□ 1.17
CTSH-213ENST00000533777 PNNQ9H307 717 aaKnown RBP22.38■■□□□ 1.17
CTSH-213ENST00000533777 DZIP1LQ8IYY4 767 aaKnown RBP22.37■■□□□ 1.17
CTSH-213ENST00000533777 PDZRN3Q9UPQ7 1066 aa22.36■■□□□ 1.17
CTSH-213ENST00000533777 DLC1Q96QB1 1528 aa22.36■■□□□ 1.17
CTSH-213ENST00000533777 CDC42BPGQ6DT37 1551 aa22.36■■□□□ 1.17
CTSH-213ENST00000533777 REREQ9P2R6 1566 aa22.36■■□□□ 1.17
CTSH-213ENST00000533777 TSR2Q969E8 191 aaKnown RBP22.36■■□□□ 1.17
CTSH-213ENST00000533777 DIAPH1O60610 1272 aaKnown RBP22.35■■□□□ 1.17
CTSH-213ENST00000533777 EXOSC9Q06265 439 aaKnown RBP22.35■■□□□ 1.17
CTSH-213ENST00000533777 FTSJ3Q8IY81 847 aaKnown RBP22.35■■□□□ 1.17
CTSH-213ENST00000533777 CDK19Q9BWU1 502 aa22.35■■□□□ 1.17
CTSH-213ENST00000533777 FBXO31Q5XUX0 539 aaPredicted RBP22.34■■□□□ 1.17
CTSH-213ENST00000533777 SEC24BO95487 1268 aa22.34■■□□□ 1.17
CTSH-213ENST00000533777 PPP6R1Q9UPN7 881 aa22.34■■□□□ 1.17
CTSH-213ENST00000533777 SMC4Q9NTJ3 1288 aa22.33■■□□□ 1.17
CTSH-213ENST00000533777 AGLP35573 1532 aa22.32■■□□□ 1.16
CTSH-213ENST00000533777 SENP3Q9H4L4 574 aaPredicted RBP22.31■■□□□ 1.16
CTSH-213ENST00000533777 ATP7BP35670 1465 aa22.31■■□□□ 1.16
CTSH-213ENST00000533777 RIPK4P57078 832 aa22.31■■□□□ 1.16
CTSH-213ENST00000533777 CABP1Q9NZU7 370 aa22.31■■□□□ 1.16
CTSH-213ENST00000533777 TRIM27P14373 513 aa22.3■■□□□ 1.16
CTSH-213ENST00000533777 SSH1Q8WYL5 1049 aa22.3■■□□□ 1.16
CTSH-213ENST00000533777 STAG3Q9UJ98 1225 aa22.3■■□□□ 1.16
CTSH-213ENST00000533777 DDX19BQ9UMR2 479 aa22.3■■□□□ 1.16
CTSH-213ENST00000533777 SETD1AO15047 1707 aaKnown RBP22.3■■□□□ 1.16
CTSH-213ENST00000533777 FCHSD2O94868 740 aa22.3■■□□□ 1.16
CTSH-213ENST00000533777 BECN1Q14457 450 aa22.3■■□□□ 1.16
CTSH-213ENST00000533777 ATF7IPQ6VMQ6 1270 aa22.3■■□□□ 1.16
CTSH-213ENST00000533777 GSE1Q14687 1217 aa22.29■■□□□ 1.16
CTSH-213ENST00000533777 UPF2Q9HAU5 1272 aaKnown RBP22.29■■□□□ 1.16
CTSH-213ENST00000533777 SPATA31D1Q6ZQQ2 1576 aa22.28■■□□□ 1.16
CTSH-213ENST00000533777 HDAC1Q13547 482 aaPredicted RBP22.28■■□□□ 1.16
CTSH-213ENST00000533777 A2ML1A8K2U0 1454 aa22.28■■□□□ 1.16
CTSH-213ENST00000533777 LRRC7Q96NW7 1537 aa22.27■■□□□ 1.16
CTSH-213ENST00000533777 KIF16BQ96L93 1317 aa22.26■■□□□ 1.15
CTSH-213ENST00000533777 RIMBP3CA6NJZ7 1639 aa22.26■■□□□ 1.15
CTSH-213ENST00000533777 RIMBP3BA6NNM3 1639 aa22.26■■□□□ 1.15
CTSH-213ENST00000533777 RIMBP3Q9UFD9 1639 aa22.26■■□□□ 1.15
CTSH-213ENST00000533777 FAM135BQ49AJ0 1406 aa22.26■■□□□ 1.15
CTSH-213ENST00000533777 TBC1D32Q96NH3 1257 aa22.25■■□□□ 1.15
CTSH-213ENST00000533777 DIP2BQ9P265 1576 aa22.25■■□□□ 1.15
CTSH-213ENST00000533777 ALDH1L2Q3SY69 923 aa22.25■■□□□ 1.15
CTSH-213ENST00000533777 NOB1Q9ULX3 412 aaKnown RBP22.24■■□□□ 1.15
CTSH-213ENST00000533777 IPO8O15397 1037 aaKnown RBP22.24■■□□□ 1.15
CTSH-213ENST00000533777 RIMS2Q9UQ26 1411 aa22.24■■□□□ 1.15
CTSH-213ENST00000533777 MAP2P11137 1827 aaKnown RBP22.23■■□□□ 1.15
CTSH-213ENST00000533777 PPIP5K1Q6PFW1 1433 aa22.23■■□□□ 1.15
CTSH-213ENST00000533777 ITPRIPQ8IWB1 547 aa22.23■■□□□ 1.15
CTSH-213ENST00000533777 ZNF428Q96B54 188 aa22.23■■□□□ 1.15
CTSH-213ENST00000533777 RSPH6AQ9H0K4 717 aa22.23■■□□□ 1.15
CTSH-213ENST00000533777 POLKQ9UBT6 870 aa22.23■■□□□ 1.15
CTSH-213ENST00000533777 FRAT2O75474 233 aaPredicted RBP22.21■■□□□ 1.15
CTSH-213ENST00000533777 BRPF1P55201 1214 aaPredicted RBP22.21■■□□□ 1.15
CTSH-213ENST00000533777 SMC5Q8IY18 1101 aa22.21■■□□□ 1.15
CTSH-213ENST00000533777 FAM69CQ0P6D2 419 aa22.2■■□□□ 1.14
CTSH-213ENST00000533777 WAPLQ7Z5K2 1190 aa22.2■■□□□ 1.14
CTSH-213ENST00000533777 ZBTB40Q9NUA8 1239 aa22.2■■□□□ 1.14
CTSH-213ENST00000533777 CPSF1Q10570 1443 aaKnown RBP22.2■■□□□ 1.14
CTSH-213ENST00000533777 PRKAR2BP31323 418 aa22.19■■□□□ 1.14
CTSH-213ENST00000533777 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.19■■□□□ 1.14
CTSH-213ENST00000533777 TMEM57Q8N5G2 664 aa22.19■■□□□ 1.14
CTSH-213ENST00000533777 EDC4Q6P2E9 1401 aaKnown RBP22.19■■□□□ 1.14
CTSH-213ENST00000533777 CYB5RLQ6IPT4 315 aa22.19■■□□□ 1.14
CTSH-213ENST00000533777 NRXN3Q9Y4C0 1643 aa22.18■■□□□ 1.14
CTSH-213ENST00000533777 CALD1Q05682 793 aaKnown RBP22.16■■□□□ 1.14
CTSH-213ENST00000533777 TSPOAP1O95153 1857 aa22.16■■□□□ 1.14
CTSH-213ENST00000533777 NFE2L2Q16236 605 aa22.16■■□□□ 1.14
CTSH-213ENST00000533777 CDK12Q9NYV4 1490 aaPredicted RBP22.16■■□□□ 1.14
CTSH-213ENST00000533777 AATKQ6ZMQ8 1374 aa22.15■■□□□ 1.14
CTSH-213ENST00000533777 WASLO00401 505 aaPredicted RBP22.15■■□□□ 1.14
CTSH-213ENST00000533777 KNDC1Q76NI1 1749 aa22.14■■□□□ 1.14
CTSH-213ENST00000533777 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.13■■□□□ 1.13
CTSH-213ENST00000533777 ANTXR1Q9H6X2 564 aa22.13■■□□□ 1.13
CTSH-213ENST00000533777 MON2Q7Z3U7 1717 aa22.13■■□□□ 1.13
CTSH-213ENST00000533777 DNAJC5Q9H3Z4 198 aa22.13■■□□□ 1.13
CTSH-213ENST00000533777 IL13P35225 146 aa22.12■■□□□ 1.13
CTSH-213ENST00000533777 TBC1D2Q9BYX2 928 aa22.12■■□□□ 1.13
CTSH-213ENST00000533777 FBLN1P23142 703 aa22.12■■□□□ 1.13
CTSH-213ENST00000533777 ARHGAP45Q92619 1136 aa22.12■■□□□ 1.13
CTSH-213ENST00000533777 SIRT1Q96EB6 747 aa22.11■■□□□ 1.13
CTSH-213ENST00000533777 PHACTR3Q96KR7 559 aa22.11■■□□□ 1.13
CTSH-213ENST00000533777 CHMP4BQ9H444 224 aaKnown RBP22.11■■□□□ 1.13
CTSH-213ENST00000533777 IFT57Q9NWB7 429 aa22.11■■□□□ 1.13
CTSH-213ENST00000533777 GNAI1P63096 354 aa22.1■■□□□ 1.13
CTSH-213ENST00000533777 PTCH1Q13635 1447 aa22.1■■□□□ 1.13
CTSH-213ENST00000533777 PIK3R4Q99570 1358 aa22.1■■□□□ 1.13
CTSH-213ENST00000533777 EMILIN1Q9Y6C2 1016 aa22.1■■□□□ 1.13
CTSH-213ENST00000533777 TECPR2O15040 1411 aa22.1■■□□□ 1.13
CTSH-213ENST00000533777 VAMP4O75379 141 aa22.09■■□□□ 1.13
CTSH-213ENST00000533777 HMOX1P09601 288 aa22.09■■□□□ 1.13
CTSH-213ENST00000533777 NUCB1Q02818 461 aa22.09■■□□□ 1.13
CTSH-213ENST00000533777 C22orf23Q9BZE7 217 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms