RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
BEST3-207ENST00000533674 TMEM132EQ6IEE7 984 aa13.44□□□□□ -0.26
BEST3-207ENST00000533674 LMOD2Q6P5Q4 547 aa13.44□□□□□ -0.26
BEST3-207ENST00000533674 UNC5CLQ8IV45 518 aa13.44□□□□□ -0.26
BEST3-207ENST00000533674 CCDC9Q9Y3X0 531 aaKnown RBP13.44□□□□□ -0.26
BEST3-207ENST00000533674 TECPR2O15040 1411 aa13.44□□□□□ -0.26
BEST3-207ENST00000533674 SRCAPQ6ZRS2 3230 aa13.44□□□□□ -0.26
BEST3-207ENST00000533674 RALGAPBQ86X10 1494 aa13.43□□□□□ -0.26
BEST3-207ENST00000533674 USP32Q8NFA0 1604 aa13.43□□□□□ -0.26
BEST3-207ENST00000533674 PSME1Q06323 249 aa13.43□□□□□ -0.26
BEST3-207ENST00000533674 KRT28Q7Z3Y7 464 aa13.43□□□□□ -0.26
BEST3-207ENST00000533674 IFT172Q9UG01 1749 aa13.43□□□□□ -0.26
BEST3-207ENST00000533674 SPATA31A3Q5VYP0 1347 aa13.42□□□□□ -0.26
BEST3-207ENST00000533674 A0A0G2JS52 829 aa13.42□□□□□ -0.26
BEST3-207ENST00000533674 MYT1Q01538 1121 aa13.42□□□□□ -0.26
BEST3-207ENST00000533674 ABCC11Q96J66 1382 aa13.42□□□□□ -0.26
BEST3-207ENST00000533674 PLEKHH1Q9ULM0 1364 aa13.42□□□□□ -0.26
BEST3-207ENST00000533674 BLMP54132 1417 aaPredicted RBP13.41□□□□□ -0.26
BEST3-207ENST00000533674 YTHDC2Q9H6S0 1430 aaKnown RBP13.41□□□□□ -0.26
BEST3-207ENST00000533674 RASEFQ8IZ41 740 aa13.41□□□□□ -0.26
BEST3-207ENST00000533674 GLI3P10071 1580 aa13.41□□□□□ -0.26
BEST3-207ENST00000533674 PIK3C2GO75747 1445 aa13.4□□□□□ -0.26
BEST3-207ENST00000533674 TNS3Q68CZ2 1445 aa13.4□□□□□ -0.26
BEST3-207ENST00000533674 SLIT2O94813 1529 aa13.4□□□□□ -0.26
BEST3-207ENST00000533674 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
BEST3-207ENST00000533674 TSPYL2Q9H2G4 693 aaPredicted RBP13.4□□□□□ -0.26
BEST3-207ENST00000533674 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
BEST3-207ENST00000533674 SPATA31E1Q6ZUB1 1445 aa13.39□□□□□ -0.27
BEST3-207ENST00000533674 NUBP1P53384 320 aa13.39□□□□□ -0.27
BEST3-207ENST00000533674 MPHOSPH9Q99550 1183 aa13.39□□□□□ -0.27
BEST3-207ENST00000533674 PLCH1Q4KWH8 1693 aa13.39□□□□□ -0.27
BEST3-207ENST00000533674 DHX57Q6P158 1386 aaKnown RBP13.38□□□□□ -0.27
BEST3-207ENST00000533674 SAFB2Q14151 953 aaKnown RBP eCLIP13.38□□□□□ -0.27
BEST3-207ENST00000533674 SEPT12Q8IYM1 358 aa13.38□□□□□ -0.27
BEST3-207ENST00000533674 CABLES1Q8TDN4 633 aa13.38□□□□□ -0.27
BEST3-207ENST00000533674 BRWD3Q6RI45 1802 aa13.38□□□□□ -0.27
BEST3-207ENST00000533674 RGPD8O14715 1765 aaPredicted RBP13.37□□□□□ -0.27
BEST3-207ENST00000533674 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
BEST3-207ENST00000533674 CCDC61Q9Y6R9 512 aa13.37□□□□□ -0.27
BEST3-207ENST00000533674 EP400Q96L91 3159 aa13.37□□□□□ -0.27
BEST3-207ENST00000533674 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
BEST3-207ENST00000533674 VPS72Q15906 364 aa13.36□□□□□ -0.27
BEST3-207ENST00000533674 DEFB132Q7Z7B7 95 aa13.36□□□□□ -0.27
BEST3-207ENST00000533674 POGKQ9P215 609 aa13.36□□□□□ -0.27
BEST3-207ENST00000533674 KRT27Q7Z3Y8 459 aa13.35□□□□□ -0.27
BEST3-207ENST00000533674 PRAM1Q96QH2 718 aa13.35□□□□□ -0.27
BEST3-207ENST00000533674 ABCA3Q99758 1704 aa13.35□□□□□ -0.27
BEST3-207ENST00000533674 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
BEST3-207ENST00000533674 PMFBP1Q8TBY8 1022 aa13.34□□□□□ -0.27
BEST3-207ENST00000533674 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
BEST3-207ENST00000533674 C14orf93Q9H972 538 aaKnown RBP13.34□□□□□ -0.27
BEST3-207ENST00000533674 NRXN1Q9ULB1 1477 aa13.34□□□□□ -0.27
BEST3-207ENST00000533674 BAG6P46379 1132 aa13.33□□□□□ -0.28
BEST3-207ENST00000533674 CFAP70Q5T0N1 1121 aa13.33□□□□□ -0.28
BEST3-207ENST00000533674 ACIN1Q9UKV3 1341 aaKnown RBP13.33□□□□□ -0.28
BEST3-207ENST00000533674 GPRASP1Q5JY77 1395 aa13.32□□□□□ -0.28
BEST3-207ENST00000533674 GALR2O43603 387 aaPredicted RBP13.31□□□□□ -0.28
BEST3-207ENST00000533674 EIF3AQ14152 1382 aaKnown RBP13.31□□□□□ -0.28
BEST3-207ENST00000533674 ANKARQ7Z5J8 1434 aa13.3□□□□□ -0.28
BEST3-207ENST00000533674 FAM98CQ17RN3 349 aaKnown RBP13.3□□□□□ -0.28
BEST3-207ENST00000533674 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
BEST3-207ENST00000533674 HIRIP3Q9BW71 556 aaPredicted RBP13.3□□□□□ -0.28
BEST3-207ENST00000533674 BTG4Q9NY30 223 aa13.3□□□□□ -0.28
BEST3-207ENST00000533674 FAM83GA6ND36 823 aa13.29□□□□□ -0.28
BEST3-207ENST00000533674 COL14A1Q05707 1796 aaKnown RBP13.29□□□□□ -0.28
BEST3-207ENST00000533674 DLC1Q96QB1 1528 aa13.29□□□□□ -0.28
BEST3-207ENST00000533674 ADGRB2O60241 1585 aa13.28□□□□□ -0.28
BEST3-207ENST00000533674 LRP5O75197 1615 aa13.28□□□□□ -0.28
BEST3-207ENST00000533674 PSDA5PKW4 1024 aaPredicted RBP13.28□□□□□ -0.28
BEST3-207ENST00000533674 ONECUT3O60422 494 aaPredicted RBP13.28□□□□□ -0.28
BEST3-207ENST00000533674 FAM212AQ96EL1 285 aa13.28□□□□□ -0.28
BEST3-207ENST00000533674 TRAK1Q9UPV9 953 aa13.28□□□□□ -0.28
BEST3-207ENST00000533674 MINK1Q8N4C8 1332 aaPredicted RBP13.28□□□□□ -0.28
BEST3-207ENST00000533674 RGPD1P0DJD0 1748 aa13.27□□□□□ -0.28
BEST3-207ENST00000533674 NRAPQ86VF7 1730 aa13.27□□□□□ -0.28
BEST3-207ENST00000533674 NGDNQ8NEJ9 315 aaKnown RBP13.27□□□□□ -0.29
BEST3-207ENST00000533674 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
BEST3-207ENST00000533674 TRPM3Q9HCF6 1732 aaPredicted RBP13.26□□□□□ -0.29
BEST3-207ENST00000533674 ALS2Q96Q42 1657 aa13.25□□□□□ -0.29
BEST3-207ENST00000533674 TULP4Q9NRJ4 1543 aa13.25□□□□□ -0.29
BEST3-207ENST00000533674 POTEIP0CG38 1075 aa13.25□□□□□ -0.29
BEST3-207ENST00000533674 KIF12Q96FN5 646 aa13.25□□□□□ -0.29
BEST3-207ENST00000533674 PRDM11Q9NQV5 511 aa13.25□□□□□ -0.29
BEST3-207ENST00000533674 KDM2AQ9Y2K7 1162 aa13.25□□□□□ -0.29
BEST3-207ENST00000533674 EN1Q05925 392 aaPredicted RBP13.24□□□□□ -0.29
BEST3-207ENST00000533674 FAM182BQ5T319 152 aa13.24□□□□□ -0.29
BEST3-207ENST00000533674 MS4A3Q96HJ5 214 aa13.24□□□□□ -0.29
BEST3-207ENST00000533674 ITSN1Q15811 1721 aa13.23□□□□□ -0.29
BEST3-207ENST00000533674 DCBLD2Q96PD2 775 aa13.23□□□□□ -0.29
BEST3-207ENST00000533674 SPATA31A5Q5VU36 1347 aa13.22□□□□□ -0.29
BEST3-207ENST00000533674 SPATA31A7Q8IWB4 1347 aa13.22□□□□□ -0.29
BEST3-207ENST00000533674 WASLO00401 505 aaPredicted RBP13.22□□□□□ -0.29
BEST3-207ENST00000533674 HRCP23327 699 aa13.22□□□□□ -0.29
BEST3-207ENST00000533674 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
BEST3-207ENST00000533674 STRN4Q9NRL3 753 aa13.22□□□□□ -0.29
BEST3-207ENST00000533674 ADGRB1O14514 1584 aa13.22□□□□□ -0.29
BEST3-207ENST00000533674 R3HDM1Q15032 1099 aaKnown RBP13.21□□□□□ -0.29
BEST3-207ENST00000533674 PRR36Q9H6K5 1346 aa13.2□□□□□ -0.3
BEST3-207ENST00000533674 RAB3GAP2Q9H2M9 1393 aa13.2□□□□□ -0.3
BEST3-207ENST00000533674 CRYBG1Q9Y4K1 1723 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms