RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 FSD1Q9BTV5 496 aa8.39□□□□□ -1.07
CTNND1-236ENST00000533667 GNAI2P04899 355 aa8.39□□□□□ -1.07
CTNND1-236ENST00000533667 CCT4P50991 539 aaKnown RBP8.39□□□□□ -1.07
CTNND1-236ENST00000533667 AEBP1Q8IUX7 1158 aa8.39□□□□□ -1.07
CTNND1-236ENST00000533667 ZNF396Q96N95 335 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-236ENST00000533667 CABP2Q9NPB3 220 aa8.39□□□□□ -1.07
CTNND1-236ENST00000533667 CIZ1Q9ULV3 898 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-236ENST00000533667 KINO60870 393 aaKnown RBP8.39□□□□□ -1.07
CTNND1-236ENST00000533667 TWISTNBQ3B726 338 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-236ENST00000533667 PNISRQ8TF01 805 aaKnown RBP8.39□□□□□ -1.07
CTNND1-236ENST00000533667 ANKRD1Q15327 319 aa8.39□□□□□ -1.07
CTNND1-236ENST00000533667 WASHC4Q2M389 1173 aa8.39□□□□□ -1.07
CTNND1-236ENST00000533667 SURF6O75683 361 aaKnown RBP8.38□□□□□ -1.07
CTNND1-236ENST00000533667 EXOSC9Q06265 439 aaKnown RBP8.38□□□□□ -1.07
CTNND1-236ENST00000533667 PLEKHO1Q53GL0 409 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-236ENST00000533667 AEBP2Q6ZN18 517 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-236ENST00000533667 NEUROD6Q96NK8 337 aa8.38□□□□□ -1.07
CTNND1-236ENST00000533667 BACH2Q9BYV9 841 aa8.38□□□□□ -1.07
CTNND1-236ENST00000533667 SRCIN1Q9C0H9 1055 aa8.38□□□□□ -1.07
CTNND1-236ENST00000533667 TBC1D2BQ9UPU7 963 aa8.38□□□□□ -1.07
CTNND1-236ENST00000533667 NEK4P51957 841 aa8.38□□□□□ -1.07
CTNND1-236ENST00000533667 PRM3Q9NNZ6 103 aa8.38□□□□□ -1.07
CTNND1-236ENST00000533667 C9orf84Q5VXU9 1444 aa8.38□□□□□ -1.07
CTNND1-236ENST00000533667 RBM10P98175 930 aaKnown RBP8.38□□□□□ -1.07
CTNND1-236ENST00000533667 ZNF692Q9BU19 519 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-236ENST00000533667 GPRASP1Q5JY77 1395 aa8.38□□□□□ -1.07
CTNND1-236ENST00000533667 PRKAR2BP31323 418 aa8.38□□□□□ -1.07
CTNND1-236ENST00000533667 CDCA7LQ96GN5 454 aa8.38□□□□□ -1.07
CTNND1-236ENST00000533667 JMYQ8N9B5 988 aa8.37□□□□□ -1.07
CTNND1-236ENST00000533667 CFTRP13569 1480 aa8.37□□□□□ -1.07
CTNND1-236ENST00000533667 NLRP6P59044 892 aa8.37□□□□□ -1.07
CTNND1-236ENST00000533667 CAVIN1Q6NZI2 390 aaKnown RBP8.37□□□□□ -1.07
CTNND1-236ENST00000533667 TRIM5Q9C035 493 aa8.37□□□□□ -1.07
CTNND1-236ENST00000533667 RPGRIP1LQ68CZ1 1315 aa8.37□□□□□ -1.07
CTNND1-236ENST00000533667 HECW1Q76N89 1606 aa8.37□□□□□ -1.07
CTNND1-236ENST00000533667 FILIP1LQ4L180 1135 aa8.37□□□□□ -1.07
CTNND1-236ENST00000533667 CFAP70Q5T0N1 1121 aa8.37□□□□□ -1.07
CTNND1-236ENST00000533667 SMARCE1Q969G3 411 aa8.37□□□□□ -1.07
CTNND1-236ENST00000533667 CCDC43Q96MW1 224 aaKnown RBP8.37□□□□□ -1.07
CTNND1-236ENST00000533667 CWC15Q9P013 229 aaKnown RBP8.37□□□□□ -1.07
CTNND1-236ENST00000533667 WDR33Q9C0J8 1336 aaKnown RBP8.37□□□□□ -1.07
CTNND1-236ENST00000533667 MYO6Q9UM54 1294 aa8.37□□□□□ -1.07
CTNND1-236ENST00000533667 R3HCC1Q9Y3T6 440 aaKnown RBP8.37□□□□□ -1.07
CTNND1-236ENST00000533667 PRXQ9BXM0 1461 aa8.36□□□□□ -1.07
CTNND1-236ENST00000533667 TROQ12816 1431 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-236ENST00000533667 ERBINQ96RT1 1412 aa8.36□□□□□ -1.07
CTNND1-236ENST00000533667 ATF3P18847 181 aa8.36□□□□□ -1.07
CTNND1-236ENST00000533667 MVPQ14764 893 aaKnown RBP8.36□□□□□ -1.07
CTNND1-236ENST00000533667 K7ELQ4 463 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-236ENST00000533667 IRX3P78415 501 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-236ENST00000533667 RBM33Q96EV2 1170 aaKnown RBP8.36□□□□□ -1.07
CTNND1-236ENST00000533667 TIAM1Q13009 1591 aa8.36□□□□□ -1.07
CTNND1-236ENST00000533667 ATF7IPQ6VMQ6 1270 aa8.35□□□□□ -1.07
CTNND1-236ENST00000533667 SLC3A2P08195 630 aaKnown RBP8.35□□□□□ -1.07
CTNND1-236ENST00000533667 TXLNAP40222 546 aa8.35□□□□□ -1.07
CTNND1-236ENST00000533667 NLRP2Q9NX02 1062 aa8.35□□□□□ -1.07
CTNND1-236ENST00000533667 NOB1Q9ULX3 412 aaKnown RBP8.35□□□□□ -1.07
CTNND1-236ENST00000533667 CYP46A1Q9Y6A2 500 aa8.35□□□□□ -1.07
CTNND1-236ENST00000533667 ANKRD30BQ9BXX2 1392 aa8.35□□□□□ -1.07
CTNND1-236ENST00000533667 PRPF40AO75400 957 aaKnown RBP8.35□□□□□ -1.07
CTNND1-236ENST00000533667 OFD1O75665 1012 aa8.35□□□□□ -1.07
CTNND1-236ENST00000533667 CCDC192P0DO97 292 aa8.35□□□□□ -1.07
CTNND1-236ENST00000533667 TMEM132EQ6IEE7 984 aa8.35□□□□□ -1.07
CTNND1-236ENST00000533667 LRRCC1Q9C099 1032 aa8.35□□□□□ -1.07
CTNND1-236ENST00000533667 SLC52A1Q9NWF4 448 aa8.35□□□□□ -1.07
CTNND1-236ENST00000533667 ATAD2Q6PL18 1390 aa8.35□□□□□ -1.07
CTNND1-236ENST00000533667 AQRO60306 1485 aaKnown RBP eCLIP8.35□□□□□ -1.072e-9■■■□□ 18.1
CTNND1-236ENST00000533667 NAP1L1P55209 391 aaKnown RBP8.35□□□□□ -1.07
CTNND1-236ENST00000533667 AIMP1Q12904 312 aaKnown RBP8.35□□□□□ -1.07
CTNND1-236ENST00000533667 DCTN1Q14203 1278 aa8.35□□□□□ -1.07
CTNND1-236ENST00000533667 DACH1Q9UI36 760 aa8.35□□□□□ -1.07
CTNND1-236ENST00000533667 RDXP35241 583 aaKnown RBP8.34□□□□□ -1.07
CTNND1-236ENST00000533667 EPS15P42566 896 aa8.34□□□□□ -1.07
CTNND1-236ENST00000533667 AXDND1Q5T1B0 1012 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-236ENST00000533667 RNF214Q8ND24 703 aa8.34□□□□□ -1.07
CTNND1-236ENST00000533667 ZSCAN31Q96LW9 406 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-236ENST00000533667 RAD21O60216 631 aa8.34□□□□□ -1.07
CTNND1-236ENST00000533667 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.34□□□□□ -1.071e-7■■■□□ 16.3
CTNND1-236ENST00000533667 STK38Q15208 465 aa8.34□□□□□ -1.07
CTNND1-236ENST00000533667 CT47A1Q5JQC4 288 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-236ENST00000533667 CYB5RLQ6IPT4 315 aa8.34□□□□□ -1.07
CTNND1-236ENST00000533667 TXLNBQ8N3L3 684 aa8.34□□□□□ -1.07
CTNND1-236ENST00000533667 PDILTQ8N807 584 aa8.34□□□□□ -1.07
CTNND1-236ENST00000533667 SUPT6HQ7KZ85 1726 aaKnown RBP8.34□□□□□ -1.07
CTNND1-236ENST00000533667 TOP2BQ02880 1626 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 CCDC158Q5M9N0 1113 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 RPAP2Q8IXW5 612 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-236ENST00000533667 NEFHP12036 1026 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 KRT85P78386 507 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 FAM69CQ0P6D2 419 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 SYTL4Q96C24 671 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-236ENST00000533667 AKNAQ7Z591 1439 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 SYNJ1O43426 1573 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 KIF6Q6ZMV9 814 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 CHD1LQ86WJ1 897 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 STK11IPQ8N1F8 1099 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 CAGE1Q8TC20 777 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 MAGEC2Q9UBF1 373 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-236ENST00000533667 DAPK1P53355 1430 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 CLGNO14967 610 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms