RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 LRRC59Q96AG4 307 aaKnown RBP18.49■□□□□ 0.55
TRAPPC4-214ENST00000533632 CARD14Q9BXL6 1004 aa18.49■□□□□ 0.55
TRAPPC4-214ENST00000533632 NGDNQ8NEJ9 315 aaKnown RBP18.48■□□□□ 0.55
TRAPPC4-214ENST00000533632 SBNO1A3KN83 1393 aa18.48■□□□□ 0.55
TRAPPC4-214ENST00000533632 SPATA31A3Q5VYP0 1347 aa18.48■□□□□ 0.55
TRAPPC4-214ENST00000533632 TNS3Q68CZ2 1445 aa18.47■□□□□ 0.55
TRAPPC4-214ENST00000533632 PSME1Q06323 249 aa18.47■□□□□ 0.55
TRAPPC4-214ENST00000533632 LRP6O75581 1613 aa18.46■□□□□ 0.55
TRAPPC4-214ENST00000533632 PER1O15534 1290 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC4-214ENST00000533632 CRYBG1Q9Y4K1 1723 aa18.46■□□□□ 0.55
TRAPPC4-214ENST00000533632 SSH2Q76I76 1423 aa18.46■□□□□ 0.55
TRAPPC4-214ENST00000533632 ABCA3Q99758 1704 aa18.45■□□□□ 0.54
TRAPPC4-214ENST00000533632 USP6P35125 1406 aa18.45■□□□□ 0.54
TRAPPC4-214ENST00000533632 NSD3Q9BZ95 1437 aa18.45■□□□□ 0.54
TRAPPC4-214ENST00000533632 MED1Q15648 1581 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC4-214ENST00000533632 TERF2IPQ9NYB0 399 aa18.45■□□□□ 0.54
TRAPPC4-214ENST00000533632 KTN1Q86UP2 1357 aaKnown RBP18.44■□□□□ 0.54
TRAPPC4-214ENST00000533632 HDGFL2Q7Z4V5 671 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC4-214ENST00000533632 MARF1Q9Y4F3 1742 aaKnown RBP18.42■□□□□ 0.54
TRAPPC4-214ENST00000533632 MIER1Q8N108 512 aa18.42■□□□□ 0.54
TRAPPC4-214ENST00000533632 PIK3C2AO00443 1686 aa18.42■□□□□ 0.54
TRAPPC4-214ENST00000533632 SPATA31A6Q5VVP1 1343 aa18.41■□□□□ 0.54
TRAPPC4-214ENST00000533632 KIF20BQ96Q89 1820 aa18.41■□□□□ 0.54
TRAPPC4-214ENST00000533632 EDC4Q6P2E9 1401 aaKnown RBP18.41■□□□□ 0.54
TRAPPC4-214ENST00000533632 ZNF692Q9BU19 519 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC4-214ENST00000533632 ARHGEF10O15013 1369 aa18.38■□□□□ 0.53
TRAPPC4-214ENST00000533632 BRD4O60885 1362 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC4-214ENST00000533632 AMER1Q5JTC6 1135 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC4-214ENST00000533632 PHRF1Q9P1Y6 1649 aaKnown RBP18.38■□□□□ 0.53
TRAPPC4-214ENST00000533632 PAK3O75914 559 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC4-214ENST00000533632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.37■□□□□ 0.53
TRAPPC4-214ENST00000533632 KNSTRNQ9Y448 316 aa18.37■□□□□ 0.53
TRAPPC4-214ENST00000533632 TTC21BQ7Z4L5 1316 aa18.37■□□□□ 0.53
TRAPPC4-214ENST00000533632 USP54Q70EL1 1684 aa18.36■□□□□ 0.53
TRAPPC4-214ENST00000533632 ANKRD26Q9UPS8 1709 aa18.36■□□□□ 0.53
TRAPPC4-214ENST00000533632 CABLES1Q8TDN4 633 aa18.35■□□□□ 0.53
TRAPPC4-214ENST00000533632 NUTM2BA6NNL0 878 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC4-214ENST00000533632 NUTM2EB1AL46 878 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC4-214ENST00000533632 LMOD2Q6P5Q4 547 aa18.35■□□□□ 0.53
TRAPPC4-214ENST00000533632 NME9Q86XW9 330 aa18.35■□□□□ 0.53
TRAPPC4-214ENST00000533632 NUTM2AQ8IVF1 878 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC4-214ENST00000533632 FYB1O15117 783 aa18.34■□□□□ 0.53
TRAPPC4-214ENST00000533632 CNGB1Q14028 1251 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC4-214ENST00000533632 ZRANB1Q9UGI0 708 aa18.34■□□□□ 0.53
TRAPPC4-214ENST00000533632 CGNL1Q0VF96 1302 aa18.33■□□□□ 0.52
TRAPPC4-214ENST00000533632 CC2D1BQ5T0F9 858 aaKnown RBP18.32■□□□□ 0.52
TRAPPC4-214ENST00000533632 NUTM2GQ5VZR2 741 aa18.32■□□□□ 0.52
TRAPPC4-214ENST00000533632 NPC1L1Q9UHC9 1359 aa18.32■□□□□ 0.52
TRAPPC4-214ENST00000533632 USP19O94966 1318 aa18.32■□□□□ 0.52
TRAPPC4-214ENST00000533632 ABTB2Q8N961 1025 aa18.32■□□□□ 0.52
TRAPPC4-214ENST00000533632 GGNBP2Q9H3C7 697 aa18.32■□□□□ 0.52
TRAPPC4-214ENST00000533632 SLIT3O75094 1523 aa18.31■□□□□ 0.52
TRAPPC4-214ENST00000533632 TTC21AQ8NDW8 1320 aa18.31■□□□□ 0.52
TRAPPC4-214ENST00000533632 OVOS2A0A0J9YW53 1432 aa18.3■□□□□ 0.52
TRAPPC4-214ENST00000533632 OVOS2Q6IE36 1432 aa18.3■□□□□ 0.52
TRAPPC4-214ENST00000533632 PLEKHG5O94827 1062 aa18.3■□□□□ 0.52
TRAPPC4-214ENST00000533632 NSD2O96028 1365 aa18.29■□□□□ 0.52
TRAPPC4-214ENST00000533632 ADAMTS2O95450 1211 aa18.29■□□□□ 0.52
TRAPPC4-214ENST00000533632 RGS17Q9UGC6 210 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC4-214ENST00000533632 PARD3Q8TEW0 1356 aa18.28■□□□□ 0.52
TRAPPC4-214ENST00000533632 ANP32CO43423 234 aa18.28■□□□□ 0.52
TRAPPC4-214ENST00000533632 USP31Q70CQ4 1352 aa18.28■□□□□ 0.52
TRAPPC4-214ENST00000533632 PLCH1Q4KWH8 1693 aa18.27■□□□□ 0.51
TRAPPC4-214ENST00000533632 NLRP6P59044 892 aa18.27■□□□□ 0.51
TRAPPC4-214ENST00000533632 PRKRIP1Q9H875 184 aaPredicted RBP18.27■□□□□ 0.51
TRAPPC4-214ENST00000533632 NLRP13Q86W25 1043 aa18.26■□□□□ 0.51
TRAPPC4-214ENST00000533632 NFAT5O94916 1531 aa18.26■□□□□ 0.51
TRAPPC4-214ENST00000533632 SLIT2O94813 1529 aa18.24■□□□□ 0.51
TRAPPC4-214ENST00000533632 MEX3CQ5U5Q3 659 aaKnown RBP18.24■□□□□ 0.51
TRAPPC4-214ENST00000533632 C8orf37Q96NL8 207 aa18.24■□□□□ 0.51
TRAPPC4-214ENST00000533632 COL14A1Q05707 1796 aaKnown RBP18.23■□□□□ 0.51
TRAPPC4-214ENST00000533632 NWD2Q9ULI1 1742 aa18.23■□□□□ 0.51
TRAPPC4-214ENST00000533632 GCP02774 474 aa18.23■□□□□ 0.51
TRAPPC4-214ENST00000533632 FBLN1P23142 703 aa18.23■□□□□ 0.51
TRAPPC4-214ENST00000533632 COL18A1P39060 1754 aa18.23■□□□□ 0.51
TRAPPC4-214ENST00000533632 NRAPQ86VF7 1730 aa18.23■□□□□ 0.51
TRAPPC4-214ENST00000533632 LMO7Q8WWI1 1683 aa18.22■□□□□ 0.51
TRAPPC4-214ENST00000533632 MORC1Q86VD1 984 aa18.22■□□□□ 0.51
TRAPPC4-214ENST00000533632 COG3Q96JB2 828 aa18.22■□□□□ 0.51
TRAPPC4-214ENST00000533632 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.22■□□□□ 0.51
TRAPPC4-214ENST00000533632 KIAA0232Q92628 1395 aa18.22■□□□□ 0.51
TRAPPC4-214ENST00000533632 CCER2I3L3R5 266 aa18.22■□□□□ 0.51
TRAPPC4-214ENST00000533632 TNNT2P45379 298 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC4-214ENST00000533632 FNBP4Q8N3X1 1017 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC4-214ENST00000533632 AFF2P51816 1311 aa18.21■□□□□ 0.51
TRAPPC4-214ENST00000533632 MAP2P11137 1827 aaKnown RBP18.21■□□□□ 0.51
TRAPPC4-214ENST00000533632 BCL9LQ86UU0 1499 aa18.21■□□□□ 0.51
TRAPPC4-214ENST00000533632 CPDO75976 1380 aa18.21■□□□□ 0.51
TRAPPC4-214ENST00000533632 FAM83GA6ND36 823 aa18.21■□□□□ 0.51
TRAPPC4-214ENST00000533632 HAP1P54257 671 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC4-214ENST00000533632 LTN1O94822 1766 aa18.2■□□□□ 0.5
TRAPPC4-214ENST00000533632 ZC3H6P61129 1189 aaKnown RBP18.19■□□□□ 0.5
TRAPPC4-214ENST00000533632 RALBP1Q15311 655 aa18.19■□□□□ 0.5
TRAPPC4-214ENST00000533632 NGLY1Q96IV0 654 aa18.19■□□□□ 0.5
TRAPPC4-214ENST00000533632 RGPD5Q99666 1765 aa18.19■□□□□ 0.5
TRAPPC4-214ENST00000533632 SOX12O15370 315 aa18.18■□□□□ 0.5
TRAPPC4-214ENST00000533632 PEAK1Q9H792 1746 aa18.17■□□□□ 0.5
TRAPPC4-214ENST00000533632 PPP2R1AP30153 589 aa18.17■□□□□ 0.5
TRAPPC4-214ENST00000533632 POTEAQ6S8J7 498 aa18.17■□□□□ 0.5
TRAPPC4-214ENST00000533632 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms