RNA–Protein interactions for RNA: ENST00000533588.1

AP001189.4-201, humanhuman

TSL 3 BASIC

Gene AP001189.4, Length 452 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001189.4-201ENST00000533588 ALS2Q96Q42 1657 aa13.59□□□□□ -0.23
AP001189.4-201ENST00000533588 GJD4Q96KN9 370 aaPredicted RBP13.59□□□□□ -0.23
AP001189.4-201ENST00000533588 RALGAPBQ86X10 1494 aa13.59□□□□□ -0.23
AP001189.4-201ENST00000533588 PPIP5K1Q6PFW1 1433 aa13.58□□□□□ -0.24
AP001189.4-201ENST00000533588 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
AP001189.4-201ENST00000533588 CABLES1Q8TDN4 633 aa13.58□□□□□ -0.24
AP001189.4-201ENST00000533588 CARD11Q9BXL7 1154 aa13.58□□□□□ -0.24
AP001189.4-201ENST00000533588 QRICH2Q9H0J4 1663 aa13.58□□□□□ -0.24
AP001189.4-201ENST00000533588 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.58□□□□□ -0.24
AP001189.4-201ENST00000533588 RGS12O14924 1447 aa13.57□□□□□ -0.24
AP001189.4-201ENST00000533588 VPS72Q15906 364 aa13.57□□□□□ -0.24
AP001189.4-201ENST00000533588 PUS7Q96PZ0 661 aaKnown RBP13.57□□□□□ -0.24
AP001189.4-201ENST00000533588 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
AP001189.4-201ENST00000533588 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
AP001189.4-201ENST00000533588 FAM83GA6ND36 823 aa13.56□□□□□ -0.24
AP001189.4-201ENST00000533588 CABP1Q9NZU7 370 aa13.56□□□□□ -0.24
AP001189.4-201ENST00000533588 ATAD2Q6PL18 1390 aa13.56□□□□□ -0.24
AP001189.4-201ENST00000533588 ONECUT3O60422 494 aaPredicted RBP13.55□□□□□ -0.24
AP001189.4-201ENST00000533588 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.24
AP001189.4-201ENST00000533588 ABCA3Q99758 1704 aa13.55□□□□□ -0.24
AP001189.4-201ENST00000533588 NWD2Q9ULI1 1742 aa13.55□□□□□ -0.24
AP001189.4-201ENST00000533588 NLRP13Q86W25 1043 aa13.54□□□□□ -0.24
AP001189.4-201ENST00000533588 ABTB2Q8N961 1025 aa13.54□□□□□ -0.24
AP001189.4-201ENST00000533588 USP6P35125 1406 aa13.53□□□□□ -0.24
AP001189.4-201ENST00000533588 USP19O94966 1318 aa13.52□□□□□ -0.25
AP001189.4-201ENST00000533588 CPDO75976 1380 aa13.52□□□□□ -0.25
AP001189.4-201ENST00000533588 SSH2Q76I76 1423 aa13.52□□□□□ -0.25
AP001189.4-201ENST00000533588 COL14A1Q05707 1796 aaKnown RBP13.52□□□□□ -0.25
AP001189.4-201ENST00000533588 CRYBG1Q9Y4K1 1723 aa13.51□□□□□ -0.25
AP001189.4-201ENST00000533588 CCDC125Q86Z20 511 aa13.51□□□□□ -0.25
AP001189.4-201ENST00000533588 PRDM11Q9NQV5 511 aa13.51□□□□□ -0.25
AP001189.4-201ENST00000533588 BTG4Q9NY30 223 aa13.51□□□□□ -0.25
AP001189.4-201ENST00000533588 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
AP001189.4-201ENST00000533588 CPSF1Q10570 1443 aaKnown RBP13.5□□□□□ -0.25
AP001189.4-201ENST00000533588 KIAA0232Q92628 1395 aa13.49□□□□□ -0.25
AP001189.4-201ENST00000533588 TTC21AQ8NDW8 1320 aa13.49□□□□□ -0.25
AP001189.4-201ENST00000533588 GLI3P10071 1580 aa13.49□□□□□ -0.25
AP001189.4-201ENST00000533588 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
AP001189.4-201ENST00000533588 GCP02774 474 aa13.48□□□□□ -0.25
AP001189.4-201ENST00000533588 NINLQ9Y2I6 1382 aa13.47□□□□□ -0.25
AP001189.4-201ENST00000533588 PHRF1Q9P1Y6 1649 aaKnown RBP13.47□□□□□ -0.25
AP001189.4-201ENST00000533588 SPATA31A5Q5VU36 1347 aa13.47□□□□□ -0.25
AP001189.4-201ENST00000533588 SPATA31A7Q8IWB4 1347 aa13.47□□□□□ -0.25
AP001189.4-201ENST00000533588 TESK2Q96S53 571 aa13.47□□□□□ -0.25
AP001189.4-201ENST00000533588 TTC21BQ7Z4L5 1316 aa13.46□□□□□ -0.25
AP001189.4-201ENST00000533588 NLRP6P59044 892 aa13.46□□□□□ -0.25
AP001189.4-201ENST00000533588 NUTM2GQ5VZR2 741 aa13.46□□□□□ -0.25
AP001189.4-201ENST00000533588 SEPT12Q8IYM1 358 aa13.46□□□□□ -0.25
AP001189.4-201ENST00000533588 KCNH5Q8NCM2 988 aa13.46□□□□□ -0.25
AP001189.4-201ENST00000533588 PCGF6Q9BYE7 350 aa13.46□□□□□ -0.25
AP001189.4-201ENST00000533588 CCDC9Q9Y3X0 531 aaKnown RBP13.46□□□□□ -0.25
AP001189.4-201ENST00000533588 NRAPQ86VF7 1730 aa13.46□□□□□ -0.25
AP001189.4-201ENST00000533588 KTN1Q86UP2 1357 aaKnown RBP13.45□□□□□ -0.26
AP001189.4-201ENST00000533588 NRKQ7Z2Y5 1582 aa13.45□□□□□ -0.26
AP001189.4-201ENST00000533588 ST20-MTHFSA0A0A6YYL1 179 aa13.45□□□□□ -0.26
AP001189.4-201ENST00000533588 ZC3H6P61129 1189 aaKnown RBP13.45□□□□□ -0.26
AP001189.4-201ENST00000533588 TERF2IPQ9NYB0 399 aa13.45□□□□□ -0.26
AP001189.4-201ENST00000533588 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
AP001189.4-201ENST00000533588 SLIT3O75094 1523 aa13.44□□□□□ -0.26
AP001189.4-201ENST00000533588 HDGFL2Q7Z4V5 671 aaPredicted RBP13.44□□□□□ -0.26
AP001189.4-201ENST00000533588 SPATA31A1Q5TZJ5 1347 aa13.43□□□□□ -0.26
AP001189.4-201ENST00000533588 EP400Q96L91 3159 aa13.43□□□□□ -0.26
AP001189.4-201ENST00000533588 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
AP001189.4-201ENST00000533588 USP31Q70CQ4 1352 aa13.43□□□□□ -0.26
AP001189.4-201ENST00000533588 EVA1CP58658 441 aa13.42□□□□□ -0.26
AP001189.4-201ENST00000533588 CHRNA2Q15822 529 aa13.42□□□□□ -0.26
AP001189.4-201ENST00000533588 BARGINQ6ZT62 677 aa13.42□□□□□ -0.26
AP001189.4-201ENST00000533588 KRT27Q7Z3Y8 459 aa13.42□□□□□ -0.26
AP001189.4-201ENST00000533588 THRAP3Q9Y2W1 955 aaKnown RBP13.42□□□□□ -0.26
AP001189.4-201ENST00000533588 AKAP12Q02952 1782 aa13.42□□□□□ -0.26
AP001189.4-201ENST00000533588 USP47Q96K76 1375 aa13.42□□□□□ -0.26
AP001189.4-201ENST00000533588 CD163L1Q9NR16 1453 aa13.42□□□□□ -0.26
AP001189.4-201ENST00000533588 EDC4Q6P2E9 1401 aaKnown RBP13.41□□□□□ -0.26
AP001189.4-201ENST00000533588 TMF1P82094 1093 aa13.41□□□□□ -0.26
AP001189.4-201ENST00000533588 FAM98CQ17RN3 349 aaKnown RBP13.41□□□□□ -0.26
AP001189.4-201ENST00000533588 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
AP001189.4-201ENST00000533588 PIK3C2AO00443 1686 aa13.4□□□□□ -0.26
AP001189.4-201ENST00000533588 LMO7Q8WWI1 1683 aa13.4□□□□□ -0.26
AP001189.4-201ENST00000533588 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
AP001189.4-201ENST00000533588 BLMP54132 1417 aaPredicted RBP13.4□□□□□ -0.26
AP001189.4-201ENST00000533588 SLC12A5Q9H2X9 1139 aa13.4□□□□□ -0.26
AP001189.4-201ENST00000533588 ABCC6O95255 1503 aa13.39□□□□□ -0.27
AP001189.4-201ENST00000533588 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
AP001189.4-201ENST00000533588 TCP11L2Q8N4U5 519 aa13.39□□□□□ -0.27
AP001189.4-201ENST00000533588 CCER1Q8TC90 406 aaPredicted RBP13.39□□□□□ -0.27
AP001189.4-201ENST00000533588 MON2Q7Z3U7 1717 aa13.39□□□□□ -0.27
AP001189.4-201ENST00000533588 COL5A2P05997 1499 aaPredicted RBP13.38□□□□□ -0.27
AP001189.4-201ENST00000533588 C11orf95C9JLR9 678 aaPredicted RBP13.38□□□□□ -0.27
AP001189.4-201ENST00000533588 STRN4Q9NRL3 753 aa13.38□□□□□ -0.27
AP001189.4-201ENST00000533588 USP54Q70EL1 1684 aa13.37□□□□□ -0.27
AP001189.4-201ENST00000533588 THSD7AQ9UPZ6 1657 aa13.37□□□□□ -0.27
AP001189.4-201ENST00000533588 A0A1W2PP64 1363 aa13.37□□□□□ -0.27
AP001189.4-201ENST00000533588 LARP1Q6PKG0 1096 aaKnown RBP13.37□□□□□ -0.27
AP001189.4-201ENST00000533588 CRB1P82279 1406 aa13.37□□□□□ -0.27
AP001189.4-201ENST00000533588 ANKRD36BQ8N2N9 1353 aa13.36□□□□□ -0.27
AP001189.4-201ENST00000533588 A0A0G2JS52 829 aa13.36□□□□□ -0.27
AP001189.4-201ENST00000533588 MYT1Q01538 1121 aa13.36□□□□□ -0.27
AP001189.4-201ENST00000533588 SF3B2Q13435 895 aaKnown RBP13.36□□□□□ -0.27
AP001189.4-201ENST00000533588 NFAT5O94916 1531 aa13.35□□□□□ -0.27
AP001189.4-201ENST00000533588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms