RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 QRICH2Q9H0J4 1663 aa16.36■□□□□ 0.21
CLCF1-202ENST00000533438 BLMP54132 1417 aaPredicted RBP16.36■□□□□ 0.21
CLCF1-202ENST00000533438 BRWD3Q6RI45 1802 aa16.35■□□□□ 0.21
CLCF1-202ENST00000533438 NGDNQ8NEJ9 315 aaKnown RBP16.35■□□□□ 0.21
CLCF1-202ENST00000533438 L3MBTL2Q969R5 705 aa16.35■□□□□ 0.21
CLCF1-202ENST00000533438 COL14A1Q05707 1796 aaKnown RBP16.35■□□□□ 0.21
CLCF1-202ENST00000533438 PLEKHG5O94827 1062 aa16.34■□□□□ 0.21
CLCF1-202ENST00000533438 VPS72Q15906 364 aa16.34■□□□□ 0.21
CLCF1-202ENST00000533438 POLR3AO14802 1390 aaPredicted RBP16.34■□□□□ 0.21
CLCF1-202ENST00000533438 PHRF1Q9P1Y6 1649 aaKnown RBP16.34■□□□□ 0.21
CLCF1-202ENST00000533438 FAM83GA6ND36 823 aa16.33■□□□□ 0.2
CLCF1-202ENST00000533438 SIN3AQ96ST3 1273 aa16.33■□□□□ 0.2
CLCF1-202ENST00000533438 CENPJQ9HC77 1338 aaPredicted RBP16.31■□□□□ 0.2
CLCF1-202ENST00000533438 PLEKHG3A1L390 1219 aa16.31■□□□□ 0.2
CLCF1-202ENST00000533438 SEPT12Q8IYM1 358 aa16.31■□□□□ 0.2
CLCF1-202ENST00000533438 CCDC61Q9Y6R9 512 aa16.31■□□□□ 0.2
CLCF1-202ENST00000533438 PAK3O75914 559 aaPredicted RBP16.3■□□□□ 0.2
CLCF1-202ENST00000533438 ACEP12821 1306 aa16.29■□□□□ 0.2
CLCF1-202ENST00000533438 NBPF8Q3BBV2 869 aa16.28■□□□□ 0.2
CLCF1-202ENST00000533438 NEUROD1Q13562 356 aa16.27■□□□□ 0.2
CLCF1-202ENST00000533438 BTG4Q9NY30 223 aa16.27■□□□□ 0.2
CLCF1-202ENST00000533438 PPIP5K1Q6PFW1 1433 aa16.27■□□□□ 0.19
CLCF1-202ENST00000533438 DEFB132Q7Z7B7 95 aa16.26■□□□□ 0.19
CLCF1-202ENST00000533438 NRKQ7Z2Y5 1582 aa16.26■□□□□ 0.19
CLCF1-202ENST00000533438 SRPK2P78362 688 aaKnown RBP16.25■□□□□ 0.19
CLCF1-202ENST00000533438 KRT27Q7Z3Y8 459 aa16.25■□□□□ 0.19
CLCF1-202ENST00000533438 CABP2Q9NPB3 220 aa16.25■□□□□ 0.19
CLCF1-202ENST00000533438 CCDC9Q9Y3X0 531 aaKnown RBP16.24■□□□□ 0.19
CLCF1-202ENST00000533438 ROCK2O75116 1388 aaKnown RBP16.24■□□□□ 0.19
CLCF1-202ENST00000533438 SF3B2Q13435 895 aaKnown RBP16.23■□□□□ 0.19
CLCF1-202ENST00000533438 PRDM11Q9NQV5 511 aa16.23■□□□□ 0.19
CLCF1-202ENST00000533438 THSD7AQ9UPZ6 1657 aa16.23■□□□□ 0.19
CLCF1-202ENST00000533438 KIAA0232Q92628 1395 aa16.23■□□□□ 0.19
CLCF1-202ENST00000533438 NUTM2GQ5VZR2 741 aa16.22■□□□□ 0.19
CLCF1-202ENST00000533438 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
CLCF1-202ENST00000533438 BRD4O60885 1362 aaPredicted RBP16.22■□□□□ 0.19
CLCF1-202ENST00000533438 USP19O94966 1318 aa16.21■□□□□ 0.19
CLCF1-202ENST00000533438 SPATA31A5Q5VU36 1347 aa16.21■□□□□ 0.19
CLCF1-202ENST00000533438 SPATA31A7Q8IWB4 1347 aa16.21■□□□□ 0.19
CLCF1-202ENST00000533438 LMO7Q8WWI1 1683 aa16.21■□□□□ 0.19
CLCF1-202ENST00000533438 AKAP12Q02952 1782 aa16.21■□□□□ 0.18
CLCF1-202ENST00000533438 USP6P35125 1406 aa16.2■□□□□ 0.18
CLCF1-202ENST00000533438 FAM98CQ17RN3 349 aaKnown RBP16.2■□□□□ 0.18
CLCF1-202ENST00000533438 ABTB2Q8N961 1025 aa16.2■□□□□ 0.18
CLCF1-202ENST00000533438 EVC2Q86UK5 1308 aa16.19■□□□□ 0.18
CLCF1-202ENST00000533438 ZC3H6P61129 1189 aaKnown RBP16.19■□□□□ 0.18
CLCF1-202ENST00000533438 CHRNA2Q15822 529 aa16.19■□□□□ 0.18
CLCF1-202ENST00000533438 CABP1Q9NZU7 370 aa16.19■□□□□ 0.18
CLCF1-202ENST00000533438 SSH2Q76I76 1423 aa16.19■□□□□ 0.18
CLCF1-202ENST00000533438 PIK3C2AO00443 1686 aa16.18■□□□□ 0.18
CLCF1-202ENST00000533438 CPDO75976 1380 aa16.18■□□□□ 0.18
CLCF1-202ENST00000533438 LRP5O75197 1615 aa16.18■□□□□ 0.18
CLCF1-202ENST00000533438 CAMTA1Q9Y6Y1 1673 aa16.18■□□□□ 0.18
CLCF1-202ENST00000533438 BAG6P46379 1132 aa16.17■□□□□ 0.18
CLCF1-202ENST00000533438 NLRP13Q86W25 1043 aa16.17■□□□□ 0.18
CLCF1-202ENST00000533438 SLIT3O75094 1523 aa16.17■□□□□ 0.18
CLCF1-202ENST00000533438 SPATA31A1Q5TZJ5 1347 aa16.17■□□□□ 0.18
CLCF1-202ENST00000533438 SBNO2Q9Y2G9 1366 aa16.16■□□□□ 0.18
CLCF1-202ENST00000533438 DISP2A7MBM2 1401 aa16.16■□□□□ 0.18
CLCF1-202ENST00000533438 A0A0G2JS52 829 aa16.15■□□□□ 0.18
CLCF1-202ENST00000533438 GCP02774 474 aa16.15■□□□□ 0.18
CLCF1-202ENST00000533438 MYT1Q01538 1121 aa16.15■□□□□ 0.18
CLCF1-202ENST00000533438 RGPD1P0DJD0 1748 aa16.14■□□□□ 0.17
CLCF1-202ENST00000533438 STRN4Q9NRL3 753 aa16.14■□□□□ 0.17
CLCF1-202ENST00000533438 MON2Q7Z3U7 1717 aa16.14■□□□□ 0.17
CLCF1-202ENST00000533438 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
CLCF1-202ENST00000533438 CPSF1Q10570 1443 aaKnown RBP16.13■□□□□ 0.17
CLCF1-202ENST00000533438 COL18A1P39060 1754 aa16.13■□□□□ 0.17
CLCF1-202ENST00000533438 TNS1Q9HBL0 1735 aaKnown RBP16.12■□□□□ 0.17
CLCF1-202ENST00000533438 COL5A2P05997 1499 aaPredicted RBP16.11■□□□□ 0.17
CLCF1-202ENST00000533438 NLRP6P59044 892 aa16.11■□□□□ 0.17
CLCF1-202ENST00000533438 ZNF692Q9BU19 519 aaPredicted RBP16.11■□□□□ 0.17
CLCF1-202ENST00000533438 CARD11Q9BXL7 1154 aa16.11■□□□□ 0.17
CLCF1-202ENST00000533438 EN1Q05925 392 aaPredicted RBP16.1■□□□□ 0.17
CLCF1-202ENST00000533438 LARP1Q6PKG0 1096 aaKnown RBP16.1■□□□□ 0.17
CLCF1-202ENST00000533438 BARGINQ6ZT62 677 aa16.1■□□□□ 0.17
CLCF1-202ENST00000533438 CAMKK2Q96RR4 588 aa16.1■□□□□ 0.17
CLCF1-202ENST00000533438 USP54Q70EL1 1684 aa16.09■□□□□ 0.17
CLCF1-202ENST00000533438 PARP4Q9UKK3 1724 aaKnown RBP16.09■□□□□ 0.17
CLCF1-202ENST00000533438 EVA1CP58658 441 aa16.09■□□□□ 0.17
CLCF1-202ENST00000533438 FAM182BQ5T319 152 aa16.09■□□□□ 0.17
CLCF1-202ENST00000533438 TTC21BQ7Z4L5 1316 aa16.09■□□□□ 0.17
CLCF1-202ENST00000533438 RGPD5Q99666 1765 aa16.08■□□□□ 0.17
CLCF1-202ENST00000533438 PSDA5PKW4 1024 aaPredicted RBP16.08■□□□□ 0.16
CLCF1-202ENST00000533438 USP35Q9P2H5 1018 aa16.08■□□□□ 0.16
CLCF1-202ENST00000533438 TTC21AQ8NDW8 1320 aa16.08■□□□□ 0.16
CLCF1-202ENST00000533438 AATKQ6ZMQ8 1374 aa16.08■□□□□ 0.16
CLCF1-202ENST00000533438 CD163L1Q9NR16 1453 aa16.08■□□□□ 0.16
CLCF1-202ENST00000533438 FAM196AQ6ZSG2 479 aa16.07■□□□□ 0.16
CLCF1-202ENST00000533438 KTN1Q86UP2 1357 aaKnown RBP16.07■□□□□ 0.16
CLCF1-202ENST00000533438 WNK3Q9BYP7 1800 aa16.07■□□□□ 0.16
CLCF1-202ENST00000533438 NFAT5O94916 1531 aa16.06■□□□□ 0.16
CLCF1-202ENST00000533438 CRB1P82279 1406 aa16.06■□□□□ 0.16
CLCF1-202ENST00000533438 TCP11L2Q8N4U5 519 aa16.06■□□□□ 0.16
CLCF1-202ENST00000533438 THRAP3Q9Y2W1 955 aaKnown RBP16.06■□□□□ 0.16
CLCF1-202ENST00000533438 PARD3Q8TEW0 1356 aa16.05■□□□□ 0.16
CLCF1-202ENST00000533438 KCNH5Q8NCM2 988 aa16.04■□□□□ 0.16
CLCF1-202ENST00000533438 R3HDM1Q15032 1099 aaKnown RBP16.03■□□□□ 0.16
CLCF1-202ENST00000533438 EZH2Q15910 746 aaKnown RBP16.03■□□□□ 0.16
CLCF1-202ENST00000533438 ARHGEF25Q86VW2 580 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 574.6 ms