RNA–Protein interactions for RNA: ENST00000532962.5

ALKBH3-210, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 1 (best)

Gene ALKBH3, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-210ENST00000532962 USP6P35125 1406 aa24.24■■□□□ 1.47
ALKBH3-210ENST00000532962 ADAMTS8Q9UP79 889 aa24.24■■□□□ 1.47
ALKBH3-210ENST00000532962 TTC21BQ7Z4L5 1316 aa24.23■■□□□ 1.47
ALKBH3-210ENST00000532962 COG3Q96JB2 828 aa24.23■■□□□ 1.47
ALKBH3-210ENST00000532962 NRKQ7Z2Y5 1582 aa24.21■■□□□ 1.47
ALKBH3-210ENST00000532962 SCAF1Q9H7N4 1312 aaKnown RBP24.21■■□□□ 1.47
ALKBH3-210ENST00000532962 C19orf44Q9H6X5 657 aa24.2■■□□□ 1.46
ALKBH3-210ENST00000532962 PHF8Q9UPP1 1060 aa24.2■■□□□ 1.46
ALKBH3-210ENST00000532962 BLMP54132 1417 aaPredicted RBP24.2■■□□□ 1.46
ALKBH3-210ENST00000532962 NCOA3Q9Y6Q9 1424 aa24.2■■□□□ 1.46
ALKBH3-210ENST00000532962 TTC21AQ8NDW8 1320 aa24.2■■□□□ 1.46
ALKBH3-210ENST00000532962 STRCP1A6NGW2 1772 aa24.19■■□□□ 1.46
ALKBH3-210ENST00000532962 ZRANB1Q9UGI0 708 aa24.17■■□□□ 1.46
ALKBH3-210ENST00000532962 TMEM94Q12767 1356 aa24.17■■□□□ 1.46
ALKBH3-210ENST00000532962 ESCO1Q5FWF5 840 aa24.16■■□□□ 1.46
ALKBH3-210ENST00000532962 SSH2Q76I76 1423 aa24.16■■□□□ 1.46
ALKBH3-210ENST00000532962 ATF3P18847 181 aa24.15■■□□□ 1.46
ALKBH3-210ENST00000532962 DMRT2Q9Y5R5 561 aa24.15■■□□□ 1.46
ALKBH3-210ENST00000532962 NUDCQ9Y266 331 aa24.13■■□□□ 1.45
ALKBH3-210ENST00000532962 AATKQ6ZMQ8 1374 aa24.13■■□□□ 1.45
ALKBH3-210ENST00000532962 MAP2P11137 1827 aaKnown RBP24.12■■□□□ 1.45
ALKBH3-210ENST00000532962 SHPRHQ149N8 1683 aa24.12■■□□□ 1.45
ALKBH3-210ENST00000532962 POLKQ9UBT6 870 aa24.11■■□□□ 1.45
ALKBH3-210ENST00000532962 DCCP43146 1447 aa24.1■■□□□ 1.45
ALKBH3-210ENST00000532962 SENP3-EIF4A1A0A087X0R7 540 aa24.1■■□□□ 1.45
ALKBH3-210ENST00000532962 PSME1Q06323 249 aa24.1■■□□□ 1.45
ALKBH3-210ENST00000532962 PPM1GO15355 546 aaPredicted RBP24.09■■□□□ 1.45
ALKBH3-210ENST00000532962 OVOS2A0A0J9YW53 1432 aa24.09■■□□□ 1.45
ALKBH3-210ENST00000532962 OVOS2Q6IE36 1432 aa24.09■■□□□ 1.45
ALKBH3-210ENST00000532962 MSH6P52701 1360 aa24.08■■□□□ 1.45
ALKBH3-210ENST00000532962 PAK3O75914 559 aaPredicted RBP24.08■■□□□ 1.45
ALKBH3-210ENST00000532962 SALL2Q9Y467 1007 aaPredicted RBP24.08■■□□□ 1.45
ALKBH3-210ENST00000532962 USP31Q70CQ4 1352 aa24.08■■□□□ 1.44
ALKBH3-210ENST00000532962 DIAPH1O60610 1272 aaKnown RBP24.07■■□□□ 1.44
ALKBH3-210ENST00000532962 CADPS2Q86UW7 1296 aa24.07■■□□□ 1.44
ALKBH3-210ENST00000532962 GTF3C3Q9Y5Q9 886 aa24.07■■□□□ 1.44
ALKBH3-210ENST00000532962 C1orf167Q5SNV9 1468 aa24.07■■□□□ 1.44
ALKBH3-210ENST00000532962 PNPLA6Q8IY17 1366 aa24.07■■□□□ 1.44
ALKBH3-210ENST00000532962 FBLN1P23142 703 aa24.06■■□□□ 1.44
ALKBH3-210ENST00000532962 CCDC146Q8IYE0 955 aa24.06■■□□□ 1.44
ALKBH3-210ENST00000532962 ORAI2Q96SN7 254 aa24.06■■□□□ 1.44
ALKBH3-210ENST00000532962 LTBP4Q8N2S1 1624 aa24.06■■□□□ 1.44
ALKBH3-210ENST00000532962 ZNF335Q9H4Z2 1342 aaPredicted RBP24.06■■□□□ 1.44
ALKBH3-210ENST00000532962 COL3A1P02461 1466 aaPredicted RBP24.05■■□□□ 1.44
ALKBH3-210ENST00000532962 U2AF1L5P0DN76 240 aaPredicted RBP24.05■■□□□ 1.44
ALKBH3-210ENST00000532962 U2AF1Q01081 240 aaKnown RBP eCLIP24.05■■□□□ 1.44
ALKBH3-210ENST00000532962 KIF1AQ12756 1690 aa24.05■■□□□ 1.44
ALKBH3-210ENST00000532962 NLRP6P59044 892 aa24.04■■□□□ 1.44
ALKBH3-210ENST00000532962 ABTB2Q8N961 1025 aa24.04■■□□□ 1.44
ALKBH3-210ENST00000532962 SMG6Q86US8 1419 aaKnown RBP24.04■■□□□ 1.44
ALKBH3-210ENST00000532962 PIK3C2AO00443 1686 aa24.04■■□□□ 1.44
ALKBH3-210ENST00000532962 U2SURPO15042 1029 aaKnown RBP24.03■■□□□ 1.44
ALKBH3-210ENST00000532962 PDE3BQ13370 1112 aa24.03■■□□□ 1.44
ALKBH3-210ENST00000532962 EMILIN1Q9Y6C2 1016 aa24.03■■□□□ 1.44
ALKBH3-210ENST00000532962 NGEFQ8N5V2 710 aa24.03■■□□□ 1.44
ALKBH3-210ENST00000532962 RUNDC1Q96C34 613 aa24.03■■□□□ 1.44
ALKBH3-210ENST00000532962 LRRC7Q96NW7 1537 aa24.03■■□□□ 1.44
ALKBH3-210ENST00000532962 CDK12Q9NYV4 1490 aaPredicted RBP24.02■■□□□ 1.44
ALKBH3-210ENST00000532962 MST1RQ04912 1400 aa24.02■■□□□ 1.44
ALKBH3-210ENST00000532962 RRS1Q15050 365 aaKnown RBP24.02■■□□□ 1.44
ALKBH3-210ENST00000532962 XIRP1Q702N8 1843 aaKnown RBP24.01■■□□□ 1.43
ALKBH3-210ENST00000532962 FOXO3O43524 673 aa24.01■■□□□ 1.43
ALKBH3-210ENST00000532962 APAF1O14727 1248 aa24■■□□□ 1.43
ALKBH3-210ENST00000532962 PNNQ9H307 717 aaKnown RBP24■■□□□ 1.43
ALKBH3-210ENST00000532962 USP54Q70EL1 1684 aa23.98■■□□□ 1.43
ALKBH3-210ENST00000532962 SOX12O15370 315 aa23.97■■□□□ 1.43
ALKBH3-210ENST00000532962 NUTM2GQ5VZR2 741 aa23.97■■□□□ 1.43
ALKBH3-210ENST00000532962 KRT28Q7Z3Y7 464 aa23.97■■□□□ 1.43
ALKBH3-210ENST00000532962 IL13P35225 146 aa23.93■■□□□ 1.42
ALKBH3-210ENST00000532962 XPCQ01831 940 aaPredicted RBP23.93■■□□□ 1.42
ALKBH3-210ENST00000532962 MARF1Q9Y4F3 1742 aaKnown RBP23.93■■□□□ 1.42
ALKBH3-210ENST00000532962 TCP11L2Q8N4U5 519 aa23.92■■□□□ 1.42
ALKBH3-210ENST00000532962 FCHSD2O94868 740 aa23.91■■□□□ 1.42
ALKBH3-210ENST00000532962 NEFLP07196 543 aa23.91■■□□□ 1.42
ALKBH3-210ENST00000532962 AMPHP49418 695 aa23.91■■□□□ 1.42
ALKBH3-210ENST00000532962 MAP3K19Q56UN5 1328 aa23.91■■□□□ 1.42
ALKBH3-210ENST00000532962 MAPK8IP3Q9UPT6 1336 aa23.91■■□□□ 1.42
ALKBH3-210ENST00000532962 NEFMP07197 916 aa23.91■■□□□ 1.42
ALKBH3-210ENST00000532962 SBNO1A3KN83 1393 aa23.9■■□□□ 1.42
ALKBH3-210ENST00000532962 TRPM3Q9HCF6 1732 aaPredicted RBP23.9■■□□□ 1.42
ALKBH3-210ENST00000532962 LMOD2Q6P5Q4 547 aa23.9■■□□□ 1.42
ALKBH3-210ENST00000532962 KCNH5Q8NCM2 988 aa23.9■■□□□ 1.42
ALKBH3-210ENST00000532962 NPHP3Q7Z494 1330 aa23.9■■□□□ 1.42
ALKBH3-210ENST00000532962 GOLGA2Q08379 1002 aa23.89■■□□□ 1.41
ALKBH3-210ENST00000532962 NCBP3Q53F19 620 aaKnown RBP23.89■■□□□ 1.41
ALKBH3-210ENST00000532962 SUPT16HQ9Y5B9 1047 aaKnown RBP23.89■■□□□ 1.41
ALKBH3-210ENST00000532962 FLT4P35916 1363 aa23.89■■□□□ 1.41
ALKBH3-210ENST00000532962 PEAK1Q9H792 1746 aa23.89■■□□□ 1.41
ALKBH3-210ENST00000532962 IQSEC2Q5JU85 1478 aa23.88■■□□□ 1.41
ALKBH3-210ENST00000532962 KIF24Q5T7B8 1368 aa23.88■■□□□ 1.41
ALKBH3-210ENST00000532962 ZNF521Q96K83 1311 aa23.88■■□□□ 1.41
ALKBH3-210ENST00000532962 ILDR2Q71H61 639 aa23.88■■□□□ 1.41
ALKBH3-210ENST00000532962 CDCA7LQ96GN5 454 aa23.88■■□□□ 1.41
ALKBH3-210ENST00000532962 PLEKHF1Q96S99 279 aa23.88■■□□□ 1.41
ALKBH3-210ENST00000532962 SLAIN2Q9P270 581 aa23.88■■□□□ 1.41
ALKBH3-210ENST00000532962 EIF4A2Q14240 407 aaKnown RBP23.87■■□□□ 1.41
ALKBH3-210ENST00000532962 NEUROD2Q15784 382 aa23.86■■□□□ 1.41
ALKBH3-210ENST00000532962 HSP90AB2PQ58FF8 381 aa23.86■■□□□ 1.41
ALKBH3-210ENST00000532962 RSPH6AQ9H0K4 717 aa23.85■■□□□ 1.41
ALKBH3-210ENST00000532962 RRP7AQ9Y3A4 280 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms