RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 FRAT1Q92837 279 aaPredicted RBP17.46■□□□□ 0.39
CAPRIN1-212ENST00000532820 TSR2Q969E8 191 aaKnown RBP17.45■□□□□ 0.38
CAPRIN1-212ENST00000532820 MAPK8IP3Q9UPT6 1336 aa17.45■□□□□ 0.38
CAPRIN1-212ENST00000532820 PMFBP1Q8TBY8 1022 aa17.45■□□□□ 0.38
CAPRIN1-212ENST00000532820 CANXP27824 592 aaKnown RBP17.44■□□□□ 0.38
CAPRIN1-212ENST00000532820 RBM33Q96EV2 1170 aaKnown RBP17.44■□□□□ 0.38
CAPRIN1-212ENST00000532820 PLEKHG1Q9ULL1 1385 aa17.44■□□□□ 0.38
CAPRIN1-212ENST00000532820 C3P01024 1663 aa17.44■□□□□ 0.38
CAPRIN1-212ENST00000532820 THEMISQ8N1K5 641 aaPredicted RBP17.44■□□□□ 0.38
CAPRIN1-212ENST00000532820 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.44■□□□□ 0.38
CAPRIN1-212ENST00000532820 PLEKHF1Q96S99 279 aa17.44■□□□□ 0.38
CAPRIN1-212ENST00000532820 PTPRUQ92729 1446 aa17.43■□□□□ 0.38
CAPRIN1-212ENST00000532820 FAM135BQ49AJ0 1406 aa17.43■□□□□ 0.38
CAPRIN1-212ENST00000532820 TMPOP42166 694 aaKnown RBP17.43■□□□□ 0.38
CAPRIN1-212ENST00000532820 NGEFQ8N5V2 710 aa17.42■□□□□ 0.38
CAPRIN1-212ENST00000532820 COG3Q96JB2 828 aa17.42■□□□□ 0.38
CAPRIN1-212ENST00000532820 IQSEC2Q5JU85 1478 aa17.42■□□□□ 0.38
CAPRIN1-212ENST00000532820 ATP7BP35670 1465 aa17.42■□□□□ 0.38
CAPRIN1-212ENST00000532820 RIPK4P57078 832 aa17.41■□□□□ 0.38
CAPRIN1-212ENST00000532820 CPSF1Q10570 1443 aaKnown RBP17.41■□□□□ 0.38
CAPRIN1-212ENST00000532820 PANK1Q8TE04 598 aa17.41■□□□□ 0.38
CAPRIN1-212ENST00000532820 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
CAPRIN1-212ENST00000532820 ACEP12821 1306 aa17.41■□□□□ 0.38
CAPRIN1-212ENST00000532820 TECPR2O15040 1411 aa17.41■□□□□ 0.38
CAPRIN1-212ENST00000532820 PRKAR2BP31323 418 aa17.4■□□□□ 0.38
CAPRIN1-212ENST00000532820 SIRT1Q96EB6 747 aa17.4■□□□□ 0.38
CAPRIN1-212ENST00000532820 FER1L4A9Z1Z3 1794 aa17.4■□□□□ 0.38
CAPRIN1-212ENST00000532820 COL3A1P02461 1466 aaPredicted RBP17.4■□□□□ 0.38
CAPRIN1-212ENST00000532820 CPS1P31327 1500 aa17.4■□□□□ 0.38
CAPRIN1-212ENST00000532820 WDR63Q8IWG1 891 aa17.4■□□□□ 0.38
CAPRIN1-212ENST00000532820 TNNQ9UQP3 1299 aa17.4■□□□□ 0.38
CAPRIN1-212ENST00000532820 TRIM35Q9UPQ4 493 aa17.4■□□□□ 0.38
CAPRIN1-212ENST00000532820 EDC4Q6P2E9 1401 aaKnown RBP17.39■□□□□ 0.37
CAPRIN1-212ENST00000532820 CLUAP1Q96AJ1 413 aa17.38■□□□□ 0.37
CAPRIN1-212ENST00000532820 PHACTR3Q96KR7 559 aa17.38■□□□□ 0.37
CAPRIN1-212ENST00000532820 COG6Q9Y2V7 657 aa17.38■□□□□ 0.37
CAPRIN1-212ENST00000532820 MED14O60244 1454 aa17.38■□□□□ 0.37
CAPRIN1-212ENST00000532820 LAS1LQ9Y4W2 734 aaKnown RBP17.38■□□□□ 0.37
CAPRIN1-212ENST00000532820 KCNA6P17658 529 aa17.37■□□□□ 0.37
CAPRIN1-212ENST00000532820 RARSP54136 660 aaKnown RBP17.37■□□□□ 0.37
CAPRIN1-212ENST00000532820 KIF20BQ96Q89 1820 aa17.37■□□□□ 0.37
CAPRIN1-212ENST00000532820 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.37■□□□□ 0.37
CAPRIN1-212ENST00000532820 THUMPD2Q9BTF0 503 aaKnown RBP17.37■□□□□ 0.37
CAPRIN1-212ENST00000532820 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
CAPRIN1-212ENST00000532820 PNPLA6Q8IY17 1366 aa17.36■□□□□ 0.37
CAPRIN1-212ENST00000532820 TBX22Q9Y458 520 aa17.36■□□□□ 0.37
CAPRIN1-212ENST00000532820 MYH16Q9H6N6 1097 aa17.36■□□□□ 0.37
CAPRIN1-212ENST00000532820 ZNF692Q9BU19 519 aaPredicted RBP17.35■□□□□ 0.37
CAPRIN1-212ENST00000532820 EXOSC9Q06265 439 aaKnown RBP17.35■□□□□ 0.37
CAPRIN1-212ENST00000532820 ANKRD26Q9UPS8 1709 aa17.35■□□□□ 0.37
CAPRIN1-212ENST00000532820 TTC21BQ7Z4L5 1316 aa17.35■□□□□ 0.37
CAPRIN1-212ENST00000532820 FANCIQ9NVI1 1328 aa17.35■□□□□ 0.37
CAPRIN1-212ENST00000532820 MAP2P11137 1827 aaKnown RBP17.34■□□□□ 0.37
CAPRIN1-212ENST00000532820 MSH5O43196 834 aa17.34■□□□□ 0.37
CAPRIN1-212ENST00000532820 RSPH6AQ9H0K4 717 aa17.34■□□□□ 0.37
CAPRIN1-212ENST00000532820 NGDNQ8NEJ9 315 aaKnown RBP17.34■□□□□ 0.37
CAPRIN1-212ENST00000532820 NUTM2GQ5VZR2 741 aa17.34■□□□□ 0.37
CAPRIN1-212ENST00000532820 FCHSD2O94868 740 aa17.33■□□□□ 0.37
CAPRIN1-212ENST00000532820 IL13P35225 146 aa17.33■□□□□ 0.37
CAPRIN1-212ENST00000532820 CDC42BPGQ6DT37 1551 aa17.33■□□□□ 0.36
CAPRIN1-212ENST00000532820 NEFMP07197 916 aa17.33■□□□□ 0.36
CAPRIN1-212ENST00000532820 KNDC1Q76NI1 1749 aa17.33■□□□□ 0.36
CAPRIN1-212ENST00000532820 RLBP1P12271 317 aa17.33■□□□□ 0.36
CAPRIN1-212ENST00000532820 ARHGAP23Q9P227 1491 aa17.31■□□□□ 0.36
CAPRIN1-212ENST00000532820 SLIT1O75093 1534 aa17.31■□□□□ 0.36
CAPRIN1-212ENST00000532820 PLEKHG3A1L390 1219 aa17.3■□□□□ 0.36
CAPRIN1-212ENST00000532820 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
CAPRIN1-212ENST00000532820 AEBP1Q8IUX7 1158 aa17.3■□□□□ 0.36
CAPRIN1-212ENST00000532820 HSP90AB2PQ58FF8 381 aa17.3■□□□□ 0.36
CAPRIN1-212ENST00000532820 NPM2Q86SE8 214 aaKnown RBP17.3■□□□□ 0.36
CAPRIN1-212ENST00000532820 PNNQ9H307 717 aaKnown RBP17.29■□□□□ 0.36
CAPRIN1-212ENST00000532820 LRRC7Q96NW7 1537 aa17.29■□□□□ 0.36
CAPRIN1-212ENST00000532820 ADGRB2O60241 1585 aa17.29■□□□□ 0.36
CAPRIN1-212ENST00000532820 FAM83GA6ND36 823 aa17.28■□□□□ 0.36
CAPRIN1-212ENST00000532820 RGS3P49796 1198 aa17.28■□□□□ 0.36
CAPRIN1-212ENST00000532820 SMC4Q9NTJ3 1288 aa17.28■□□□□ 0.36
CAPRIN1-212ENST00000532820 ELL2O00472 640 aaPredicted RBP17.28■□□□□ 0.36
CAPRIN1-212ENST00000532820 DCTN1Q14203 1278 aa17.28■□□□□ 0.36
CAPRIN1-212ENST00000532820 KDM2BQ8NHM5 1336 aa17.28■□□□□ 0.36
CAPRIN1-212ENST00000532820 RIMS1Q86UR5 1692 aaKnown RBP17.28■□□□□ 0.36
CAPRIN1-212ENST00000532820 IGHDP01880 384 aa17.28■□□□□ 0.36
CAPRIN1-212ENST00000532820 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
CAPRIN1-212ENST00000532820 C14orf37Q86TY3 774 aa17.27■□□□□ 0.36
CAPRIN1-212ENST00000532820 ANKLE2Q86XL3 938 aa17.27■□□□□ 0.36
CAPRIN1-212ENST00000532820 TCERG1O14776 1098 aaKnown RBP17.27■□□□□ 0.36
CAPRIN1-212ENST00000532820 PDE3AQ14432 1141 aa17.27■□□□□ 0.36
CAPRIN1-212ENST00000532820 USP6P35125 1406 aa17.27■□□□□ 0.35
CAPRIN1-212ENST00000532820 SULT6B1Q6IMI4 303 aa17.27■□□□□ 0.35
CAPRIN1-212ENST00000532820 EIF4A2Q14240 407 aaKnown RBP17.26■□□□□ 0.35
CAPRIN1-212ENST00000532820 SSH1Q8WYL5 1049 aa17.26■□□□□ 0.35
CAPRIN1-212ENST00000532820 NFE2L2Q16236 605 aa17.26■□□□□ 0.35
CAPRIN1-212ENST00000532820 CENPQQ7L2Z9 268 aaPredicted RBP17.26■□□□□ 0.35
CAPRIN1-212ENST00000532820 ITSN1Q15811 1721 aa17.25■□□□□ 0.35
CAPRIN1-212ENST00000532820 PDE4AP27815 886 aa17.25■□□□□ 0.35
CAPRIN1-212ENST00000532820 MON2Q7Z3U7 1717 aa17.25■□□□□ 0.35
CAPRIN1-212ENST00000532820 AATKQ6ZMQ8 1374 aa17.25■□□□□ 0.35
CAPRIN1-212ENST00000532820 CEP170BQ9Y4F5 1589 aaPredicted RBP17.24■□□□□ 0.35
CAPRIN1-212ENST00000532820 FTSJ3Q8IY81 847 aaKnown RBP17.24■□□□□ 0.35
CAPRIN1-212ENST00000532820 NLRP6P59044 892 aa17.23■□□□□ 0.35
CAPRIN1-212ENST00000532820 AKAP12Q02952 1782 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms