RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	DHX57	Q6P158	1386 aa	Known RBP	14.18	□□□□□ -0.14
PPFIA1-223	ENST00000532793	MYOM2	P54296	1465 aa		14.18	□□□□□ -0.14
PPFIA1-223	ENST00000532793	FOXO3	O43524	673 aa		14.17	□□□□□ -0.14
PPFIA1-223	ENST00000532793	RGS12	O14924	1447 aa		14.16	□□□□□ -0.14
PPFIA1-223	ENST00000532793	XPC	Q01831	940 aa	Predicted RBP	14.16	□□□□□ -0.14
PPFIA1-223	ENST00000532793	FAM163A	Q96GL9	167 aa	Predicted RBP	14.16	□□□□□ -0.14
PPFIA1-223	ENST00000532793	TRPC5	Q9UL62	973 aa	Predicted RBP	14.16	□□□□□ -0.14
PPFIA1-223	ENST00000532793	RAB3GAP2	Q9H2M9	1393 aa		14.16	□□□□□ -0.14
PPFIA1-223	ENST00000532793	PXDN	Q92626	1479 aa		14.16	□□□□□ -0.14
PPFIA1-223	ENST00000532793	PLEKHH1	Q9ULM0	1364 aa		14.15	□□□□□ -0.14
PPFIA1-223	ENST00000532793	C14orf93	Q9H972	538 aa	Known RBP	14.15	□□□□□ -0.14
PPFIA1-223	ENST00000532793	HAP1	P54257	671 aa	Predicted RBP	14.14	□□□□□ -0.15
PPFIA1-223	ENST00000532793	ASTL	Q6HA08	431 aa	Predicted RBP	14.14	□□□□□ -0.15
PPFIA1-223	ENST00000532793	NRXN1	Q9ULB1	1477 aa		14.13	□□□□□ -0.15
PPFIA1-223	ENST00000532793	CFAP70	Q5T0N1	1121 aa		14.13	□□□□□ -0.15
PPFIA1-223	ENST00000532793	SIRT1	Q96EB6	747 aa		14.13	□□□□□ -0.15
PPFIA1-223	ENST00000532793	POGK	Q9P215	609 aa		14.13	□□□□□ -0.15
PPFIA1-223	ENST00000532793	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	14.12	□□□□□ -0.15
PPFIA1-223	ENST00000532793	ATAD2	Q6PL18	1390 aa		14.11	□□□□□ -0.15
PPFIA1-223	ENST00000532793	PSME1	Q06323	249 aa		14.11	□□□□□ -0.15
PPFIA1-223	ENST00000532793	SAFB2	Q14151	953 aa	Known RBP eCLIP	14.11	□□□□□ -0.15
PPFIA1-223	ENST00000532793	FNBP4	Q8N3X1	1017 aa	Predicted RBP	14.11	□□□□□ -0.15
PPFIA1-223	ENST00000532793	DLC1	Q96QB1	1528 aa		14.1	□□□□□ -0.15
PPFIA1-223	ENST00000532793	ATMIN	O43313	823 aa	Predicted RBP	14.1	□□□□□ -0.15
PPFIA1-223	ENST00000532793	KRT28	Q7Z3Y7	464 aa		14.1	□□□□□ -0.15
PPFIA1-223	ENST00000532793	PRAM1	Q96QH2	718 aa		14.1	□□□□□ -0.15
PPFIA1-223	ENST00000532793	PHF8	Q9UPP1	1060 aa		14.1	□□□□□ -0.15
PPFIA1-223	ENST00000532793	USP32	Q8NFA0	1604 aa		14.1	□□□□□ -0.15
PPFIA1-223	ENST00000532793	ATRN	O75882	1429 aa		14.09	□□□□□ -0.15
PPFIA1-223	ENST00000532793	LMOD2	Q6P5Q4	547 aa		14.09	□□□□□ -0.15
PPFIA1-223	ENST00000532793	SPATA31A3	Q5VYP0	1347 aa		14.09	□□□□□ -0.15
PPFIA1-223	ENST00000532793	EIF3A	Q14152	1382 aa	Known RBP	14.09	□□□□□ -0.15
PPFIA1-223	ENST00000532793	KDM2A	Q9Y2K7	1162 aa		14.08	□□□□□ -0.16
PPFIA1-223	ENST00000532793	ADGRB2	O60241	1585 aa		14.08	□□□□□ -0.16
PPFIA1-223	ENST00000532793	TNS3	Q68CZ2	1445 aa		14.07	□□□□□ -0.16
PPFIA1-223	ENST00000532793	C7	P10643	843 aa		14.07	□□□□□ -0.16
PPFIA1-223	ENST00000532793	DCAF11	Q8TEB1	546 aa		14.07	□□□□□ -0.16
PPFIA1-223	ENST00000532793	SLC39A7	Q92504	469 aa		14.07	□□□□□ -0.16
PPFIA1-223	ENST00000532793	ANKAR	Q7Z5J8	1434 aa		14.07	□□□□□ -0.16
PPFIA1-223	ENST00000532793	PLEKHG5	O94827	1062 aa		14.06	□□□□□ -0.16
PPFIA1-223	ENST00000532793	STAC3	Q96MF2	364 aa		14.06	□□□□□ -0.16
PPFIA1-223	ENST00000532793	TRAK1	Q9UPV9	953 aa		14.06	□□□□□ -0.16
PPFIA1-223	ENST00000532793	PLCH1	Q4KWH8	1693 aa		14.06	□□□□□ -0.16
PPFIA1-223	ENST00000532793	ABCA3	Q99758	1704 aa		14.06	□□□□□ -0.16
PPFIA1-223	ENST00000532793	ARHGEF10	O15013	1369 aa		14.06	□□□□□ -0.16
PPFIA1-223	ENST00000532793	BCL9L	Q86UU0	1499 aa		14.06	□□□□□ -0.16
PPFIA1-223	ENST00000532793	ITSN1	Q15811	1721 aa		14.05	□□□□□ -0.16
PPFIA1-223	ENST00000532793	NWD2	Q9ULI1	1742 aa		14.05	□□□□□ -0.16
PPFIA1-223	ENST00000532793	MAMSTR	Q6ZN01	415 aa		14.05	□□□□□ -0.16
PPFIA1-223	ENST00000532793	ADGRB1	O14514	1584 aa		14.05	□□□□□ -0.16
PPFIA1-223	ENST00000532793	UNC5CL	Q8IV45	518 aa		14.04	□□□□□ -0.16
PPFIA1-223	ENST00000532793	MS4A3	Q96HJ5	214 aa		14.04	□□□□□ -0.16
PPFIA1-223	ENST00000532793	GJD4	Q96KN9	370 aa	Predicted RBP	14.04	□□□□□ -0.16
PPFIA1-223	ENST00000532793	SBNO1	A3KN83	1393 aa		14.04	□□□□□ -0.16
PPFIA1-223	ENST00000532793	GPRASP1	Q5JY77	1395 aa		14.04	□□□□□ -0.16
PPFIA1-223	ENST00000532793	PMFBP1	Q8TBY8	1022 aa		14.03	□□□□□ -0.16
PPFIA1-223	ENST00000532793	HIRIP3	Q9BW71	556 aa	Predicted RBP	14.03	□□□□□ -0.16
PPFIA1-223	ENST00000532793	CCDC9	Q9Y3X0	531 aa	Known RBP	14.03	□□□□□ -0.16
PPFIA1-223	ENST00000532793	MINK1	Q8N4C8	1332 aa	Predicted RBP	14.03	□□□□□ -0.16
PPFIA1-223	ENST00000532793	ARHGEF28	Q8N1W1	1705 aa	Known RBP	14.03	□□□□□ -0.16
PPFIA1-223	ENST00000532793	SLIT2	O94813	1529 aa		14.02	□□□□□ -0.16
PPFIA1-223	ENST00000532793	TULP4	Q9NRJ4	1543 aa		14.02	□□□□□ -0.16
PPFIA1-223	ENST00000532793	PAK3	O75914	559 aa	Predicted RBP	14.02	□□□□□ -0.17
PPFIA1-223	ENST00000532793	HRC	P23327	699 aa		14.02	□□□□□ -0.17
PPFIA1-223	ENST00000532793	CCDC125	Q86Z20	511 aa		14.01	□□□□□ -0.17
PPFIA1-223	ENST00000532793	TRPM3	Q9HCF6	1732 aa	Predicted RBP	14.01	□□□□□ -0.17
PPFIA1-223	ENST00000532793	RALGAPB	Q86X10	1494 aa		14	□□□□□ -0.17
PPFIA1-223	ENST00000532793	BRWD3	Q6RI45	1802 aa		14	□□□□□ -0.17
PPFIA1-223	ENST00000532793	CABLES1	Q8TDN4	633 aa		14	□□□□□ -0.17
PPFIA1-223	ENST00000532793	GLI3	P10071	1580 aa		14	□□□□□ -0.17
PPFIA1-223	ENST00000532793	NGDN	Q8NEJ9	315 aa	Known RBP	13.99	□□□□□ -0.17
PPFIA1-223	ENST00000532793	KIAA1210	Q9ULL0	1709 aa		13.98	□□□□□ -0.17
PPFIA1-223	ENST00000532793	ALS2	Q96Q42	1657 aa		13.98	□□□□□ -0.17
PPFIA1-223	ENST00000532793		A0A0G2JS52	829 aa		13.98	□□□□□ -0.17
PPFIA1-223	ENST00000532793	WASL	O00401	505 aa	Predicted RBP	13.98	□□□□□ -0.17
PPFIA1-223	ENST00000532793	MNX1	P50219	401 aa	Predicted RBP	13.98	□□□□□ -0.17
PPFIA1-223	ENST00000532793	MYT1	Q01538	1121 aa		13.98	□□□□□ -0.17
PPFIA1-223	ENST00000532793	COL14A1	Q05707	1796 aa	Known RBP	13.98	□□□□□ -0.17
PPFIA1-223	ENST00000532793	POTEF	A5A3E0	1075 aa		13.97	□□□□□ -0.17
PPFIA1-223	ENST00000532793	SF3B2	Q13435	895 aa	Known RBP	13.97	□□□□□ -0.17
PPFIA1-223	ENST00000532793	VPS72	Q15906	364 aa		13.96	□□□□□ -0.17
PPFIA1-223	ENST00000532793	CDAN1	Q8IWY9	1227 aa		13.96	□□□□□ -0.17
PPFIA1-223	ENST00000532793	NRAP	Q86VF7	1730 aa		13.95	□□□□□ -0.18
PPFIA1-223	ENST00000532793	BLM	P54132	1417 aa	Predicted RBP	13.94	□□□□□ -0.18
PPFIA1-223	ENST00000532793	SEPT12	Q8IYM1	358 aa		13.94	□□□□□ -0.18
PPFIA1-223	ENST00000532793	SCUBE2	Q9NQ36	999 aa		13.94	□□□□□ -0.18
PPFIA1-223	ENST00000532793	PRR36	Q9H6K5	1346 aa		13.93	□□□□□ -0.18
PPFIA1-223	ENST00000532793	CRYBG1	Q9Y4K1	1723 aa		13.93	□□□□□ -0.18
PPFIA1-223	ENST00000532793	FAM83G	A6ND36	823 aa		13.92	□□□□□ -0.18
PPFIA1-223	ENST00000532793	BTG4	Q9NY30	223 aa		13.92	□□□□□ -0.18
PPFIA1-223	ENST00000532793	ATP7B	P35670	1465 aa		13.92	□□□□□ -0.18
PPFIA1-223	ENST00000532793	TOPAZ1	Q8N9V7	1692 aa		13.91	□□□□□ -0.18
PPFIA1-223	ENST00000532793	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.91	□□□□□ -0.18
PPFIA1-223	ENST00000532793	ATN1	P54259	1190 aa	Predicted RBP	13.91	□□□□□ -0.18
PPFIA1-223	ENST00000532793	KRT27	Q7Z3Y8	459 aa		13.91	□□□□□ -0.18
PPFIA1-223	ENST00000532793	NUDT16	Q96DE0	195 aa	Known RBP	13.91	□□□□□ -0.18
PPFIA1-223	ENST00000532793	PRDM11	Q9NQV5	511 aa		13.91	□□□□□ -0.18
PPFIA1-223	ENST00000532793	CDK19	Q9BWU1	502 aa		13.9	□□□□□ -0.18
PPFIA1-223	ENST00000532793	QRICH2	Q9H0J4	1663 aa		13.89	□□□□□ -0.19
PPFIA1-223	ENST00000532793	FAM98C	Q17RN3	349 aa	Known RBP	13.88	□□□□□ -0.19

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