RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 GOLGA6L10A6NI86 522 aa9.05□□□□□ -0.96
CTNND1-233ENST00000532787 SMC2O95347 1197 aa9.05□□□□□ -0.96
CTNND1-233ENST00000532787 WASHC4Q2M389 1173 aa9.05□□□□□ -0.96
CTNND1-233ENST00000532787 FSD1Q9BTV5 496 aa9.05□□□□□ -0.96
CTNND1-233ENST00000532787 RAPGEF4Q8WZA2 1011 aa9.05□□□□□ -0.96
CTNND1-233ENST00000532787 STIM1Q13586 685 aa9.04□□□□□ -0.96
CTNND1-233ENST00000532787 HFM1A2PYH4 1435 aa9.04□□□□□ -0.96
CTNND1-233ENST00000532787 KIAA0754O94854 1291 aa9.04□□□□□ -0.96
CTNND1-233ENST00000532787 HSP90AB3PQ58FF7 597 aa9.04□□□□□ -0.96
CTNND1-233ENST00000532787 RBM33Q96EV2 1170 aaKnown RBP9.04□□□□□ -0.96
CTNND1-233ENST00000532787 ZSCAN31Q96LW9 406 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-233ENST00000532787 SMARCA4P51532 1647 aa9.04□□□□□ -0.96
CTNND1-233ENST00000532787 KIF2AO00139 706 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-233ENST00000532787 CCT4P50991 539 aaKnown RBP9.03□□□□□ -0.96
CTNND1-233ENST00000532787 PNISRQ8TF01 805 aaKnown RBP9.03□□□□□ -0.96
CTNND1-233ENST00000532787 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.03□□□□□ -0.961e-6■■■■■ 38.5
CTNND1-233ENST00000532787 PSME1Q06323 249 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 STK38Q15208 465 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 MEX3CQ5U5Q3 659 aaKnown RBP9.03□□□□□ -0.96
CTNND1-233ENST00000532787 CCDC112Q8NEF3 446 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 PANK1Q8TE04 598 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 ZNF428Q96B54 188 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 CDK5RAP3Q96JB5 506 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 K7ELQ4 463 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-233ENST00000532787 GNAI2P04899 355 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 SYCP1Q15431 976 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 WDR63Q8IWG1 891 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 LRRC9Q6ZRR7 1453 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 PPFIBP1Q86W92 1011 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 CCAR1Q8IX12 1150 aaKnown RBP9.03□□□□□ -0.96
CTNND1-233ENST00000532787 PDZRN3Q9UPQ7 1066 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 CYP46A1Q9Y6A2 500 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 ATAD2BQ9ULI0 1458 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 SMG6Q86US8 1419 aaKnown RBP9.03□□□□□ -0.96
CTNND1-233ENST00000532787 PRPF40AO75400 957 aaKnown RBP9.03□□□□□ -0.96
CTNND1-233ENST00000532787 NEK4P51957 841 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 NEUROD6Q96NK8 337 aa9.03□□□□□ -0.96
CTNND1-233ENST00000532787 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.03□□□□□ -0.961e-7■■■□□ 16.3
CTNND1-233ENST00000532787 ANKRD50Q9ULJ7 1429 aa9.02□□□□□ -0.96
CTNND1-233ENST00000532787 KRT85P78386 507 aa9.02□□□□□ -0.96
CTNND1-233ENST00000532787 RAD21O60216 631 aa9.02□□□□□ -0.97
CTNND1-233ENST00000532787 CASKIN1Q8WXD9 1431 aa9.02□□□□□ -0.97
CTNND1-233ENST00000532787 FANCD2Q9BXW9 1451 aa9.02□□□□□ -0.97
CTNND1-233ENST00000532787 RRP9O43818 475 aaKnown RBP9.02□□□□□ -0.97
CTNND1-233ENST00000532787 TSPYL1Q9H0U9 437 aa9.02□□□□□ -0.97
CTNND1-233ENST00000532787 KIF21BO75037 1637 aa9.02□□□□□ -0.97
CTNND1-233ENST00000532787 AXDND1Q5T1B0 1012 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-233ENST00000532787 CDKL5O76039 1030 aa9.01□□□□□ -0.97
CTNND1-233ENST00000532787 ZSCAN25Q6NSZ9 544 aa9.01□□□□□ -0.97
CTNND1-233ENST00000532787 PLCD4Q9BRC7 762 aa9.01□□□□□ -0.97
CTNND1-233ENST00000532787 TNMDQ9H2S6 317 aa9.01□□□□□ -0.97
CTNND1-233ENST00000532787 GRPEL1Q9HAV7 217 aa9.01□□□□□ -0.97
CTNND1-233ENST00000532787 NUTM2FA1L443 756 aa9.01□□□□□ -0.97
CTNND1-233ENST00000532787 RNF214Q8ND24 703 aa9.01□□□□□ -0.97
CTNND1-233ENST00000532787 FBXW7Q969H0 707 aa9.01□□□□□ -0.97
CTNND1-233ENST00000532787 SMTNL1A8MU46 457 aa9.01□□□□□ -0.97
CTNND1-233ENST00000532787 GBP3Q9H0R5 595 aa9.01□□□□□ -0.97
CTNND1-233ENST00000532787 SERPINC1P01008 464 aa9.01□□□□□ -0.97
CTNND1-233ENST00000532787 TRIM22Q8IYM9 498 aa9.01□□□□□ -0.97
CTNND1-233ENST00000532787 CFAP45Q9UL16 551 aa9.01□□□□□ -0.97
CTNND1-233ENST00000532787 SURF6O75683 361 aaKnown RBP9□□□□□ -0.97
CTNND1-233ENST00000532787 IL27Q8NEV9 243 aa9□□□□□ -0.97
CTNND1-233ENST00000532787 PPP2R1AP30153 589 aa9□□□□□ -0.97
CTNND1-233ENST00000532787 KRT32Q14532 448 aa9□□□□□ -0.97
CTNND1-233ENST00000532787 PLEKHO1Q53GL0 409 aaPredicted RBP9□□□□□ -0.97
CTNND1-233ENST00000532787 BACH2Q9BYV9 841 aa9□□□□□ -0.97
CTNND1-233ENST00000532787 NOL7Q9UMY1 257 aaKnown RBP9□□□□□ -0.97
CTNND1-233ENST00000532787 CCDC158Q5M9N0 1113 aa9□□□□□ -0.97
CTNND1-233ENST00000532787 WWC2Q6AWC2 1192 aa9□□□□□ -0.97
CTNND1-233ENST00000532787 TCP11L2Q8N4U5 519 aa9□□□□□ -0.97
CTNND1-233ENST00000532787 INCENPQ9NQS7 918 aa9□□□□□ -0.97
CTNND1-233ENST00000532787 GNL3LQ9NVN8 582 aaKnown RBP9□□□□□ -0.97
CTNND1-233ENST00000532787 ADAMTS8Q9UP79 889 aa9□□□□□ -0.97
CTNND1-233ENST00000532787 ZFYVE27Q5T4F4 411 aa9□□□□□ -0.97
CTNND1-233ENST00000532787 CCDC181Q5TID7 509 aa9□□□□□ -0.97
CTNND1-233ENST00000532787 NEFHP12036 1026 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 PPP6R1Q9UPN7 881 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 NECTIN2Q92692 538 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 PLEKHH2Q8IVE3 1493 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 FOSBP53539 338 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 CEP57L1Q8IYX8 460 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 NACAP1Q9BZK3 213 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 LRRCC1Q9C099 1032 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 CCDC27Q2M243 656 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 TWISTNBQ3B726 338 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-233ENST00000532787 KIF6Q6ZMV9 814 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 WASF1Q92558 559 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 ERICH3Q5RHP9 1530 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 MCM3P25205 808 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 CCDC57Q2TAC2 916 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 PLEKHH1Q9ULM0 1364 aa8.99□□□□□ -0.97
CTNND1-233ENST00000532787 GAPVD1Q14C86 1478 aa8.98□□□□□ -0.97
CTNND1-233ENST00000532787 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-233ENST00000532787 CNKSR2Q8WXI2 1034 aa8.98□□□□□ -0.97
CTNND1-233ENST00000532787 NCOA2Q15596 1464 aa8.98□□□□□ -0.97
CTNND1-233ENST00000532787 CTNNA3Q9UI47 895 aa8.98□□□□□ -0.97
CTNND1-233ENST00000532787 GPRASP1Q5JY77 1395 aa8.98□□□□□ -0.97
CTNND1-233ENST00000532787 FIBPO43427 364 aa8.98□□□□□ -0.97
CTNND1-233ENST00000532787 SEPT7Q16181 437 aaKnown RBP8.98□□□□□ -0.97
CTNND1-233ENST00000532787 EZRP15311 586 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms