RNA–Protein interactions for RNA: ENST00000532771.5

SYVN1-214, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 709 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-214ENST00000532771 PLEKHG3A1L390 1219 aa13.72□□□□□ -0.21
SYVN1-214ENST00000532771 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
SYVN1-214ENST00000532771 NEUROD1Q13562 356 aa13.72□□□□□ -0.21
SYVN1-214ENST00000532771 ACEP12821 1306 aa13.71□□□□□ -0.21
SYVN1-214ENST00000532771 TRPM1Q7Z4N2 1603 aa13.71□□□□□ -0.22
SYVN1-214ENST00000532771 CRYBG1Q9Y4K1 1723 aa13.7□□□□□ -0.22
SYVN1-214ENST00000532771 SRPK2P78362 688 aaKnown RBP13.7□□□□□ -0.22
SYVN1-214ENST00000532771 NBPF8Q3BBV2 869 aa13.7□□□□□ -0.22
SYVN1-214ENST00000532771 ROCK2O75116 1388 aaKnown RBP13.69□□□□□ -0.22
SYVN1-214ENST00000532771 QRICH2Q9H0J4 1663 aa13.69□□□□□ -0.22
SYVN1-214ENST00000532771 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
SYVN1-214ENST00000532771 NRAPQ86VF7 1730 aa13.68□□□□□ -0.22
SYVN1-214ENST00000532771 PPIP5K1Q6PFW1 1433 aa13.68□□□□□ -0.22
SYVN1-214ENST00000532771 ONECUT3O60422 494 aaPredicted RBP13.68□□□□□ -0.22
SYVN1-214ENST00000532771 BTG4Q9NY30 223 aa13.68□□□□□ -0.22
SYVN1-214ENST00000532771 SEPT12Q8IYM1 358 aa13.67□□□□□ -0.22
SYVN1-214ENST00000532771 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
SYVN1-214ENST00000532771 PRDM11Q9NQV5 511 aa13.67□□□□□ -0.22
SYVN1-214ENST00000532771 CCDC9Q9Y3X0 531 aaKnown RBP13.67□□□□□ -0.22
SYVN1-214ENST00000532771 CCDC125Q86Z20 511 aa13.66□□□□□ -0.22
SYVN1-214ENST00000532771 EVC2Q86UK5 1308 aa13.65□□□□□ -0.22
SYVN1-214ENST00000532771 NUTM2GQ5VZR2 741 aa13.65□□□□□ -0.22
SYVN1-214ENST00000532771 BRD4O60885 1362 aaPredicted RBP13.65□□□□□ -0.22
SYVN1-214ENST00000532771 KIAA0232Q92628 1395 aa13.65□□□□□ -0.22
SYVN1-214ENST00000532771 PHRF1Q9P1Y6 1649 aaKnown RBP13.64□□□□□ -0.23
SYVN1-214ENST00000532771 ABTB2Q8N961 1025 aa13.64□□□□□ -0.23
SYVN1-214ENST00000532771 CABP1Q9NZU7 370 aa13.64□□□□□ -0.23
SYVN1-214ENST00000532771 BRWD3Q6RI45 1802 aa13.64□□□□□ -0.23
SYVN1-214ENST00000532771 USP19O94966 1318 aa13.64□□□□□ -0.23
SYVN1-214ENST00000532771 TRIM26Q12899 539 aaPredicted RBP13.63□□□□□ -0.23
SYVN1-214ENST00000532771 SPATA31A5Q5VU36 1347 aa13.63□□□□□ -0.23
SYVN1-214ENST00000532771 SPATA31A7Q8IWB4 1347 aa13.63□□□□□ -0.23
SYVN1-214ENST00000532771 ZC3H6P61129 1189 aaKnown RBP13.62□□□□□ -0.23
SYVN1-214ENST00000532771 CHRNA2Q15822 529 aa13.62□□□□□ -0.23
SYVN1-214ENST00000532771 FAM98CQ17RN3 349 aaKnown RBP13.62□□□□□ -0.23
SYVN1-214ENST00000532771 USP6P35125 1406 aa13.62□□□□□ -0.23
SYVN1-214ENST00000532771 BLMP54132 1417 aaPredicted RBP13.62□□□□□ -0.23
SYVN1-214ENST00000532771 NRKQ7Z2Y5 1582 aa13.62□□□□□ -0.23
SYVN1-214ENST00000532771 CPDO75976 1380 aa13.61□□□□□ -0.23
SYVN1-214ENST00000532771 TONSLQ96HA7 1378 aa13.61□□□□□ -0.23
SYVN1-214ENST00000532771 KRT27Q7Z3Y8 459 aa13.61□□□□□ -0.23
SYVN1-214ENST00000532771 NLRP13Q86W25 1043 aa13.61□□□□□ -0.23
SYVN1-214ENST00000532771 A0A0G2JS52 829 aa13.6□□□□□ -0.23
SYVN1-214ENST00000532771 MYT1Q01538 1121 aa13.6□□□□□ -0.23
SYVN1-214ENST00000532771 SSH2Q76I76 1423 aa13.6□□□□□ -0.23
SYVN1-214ENST00000532771 SBNO2Q9Y2G9 1366 aa13.59□□□□□ -0.23
SYVN1-214ENST00000532771 GCP02774 474 aa13.59□□□□□ -0.23
SYVN1-214ENST00000532771 CARD11Q9BXL7 1154 aa13.59□□□□□ -0.23
SYVN1-214ENST00000532771 SPATA31A1Q5TZJ5 1347 aa13.59□□□□□ -0.23
SYVN1-214ENST00000532771 STRN4Q9NRL3 753 aa13.58□□□□□ -0.24
SYVN1-214ENST00000532771 THSD7AQ9UPZ6 1657 aa13.58□□□□□ -0.24
SYVN1-214ENST00000532771 LMO7Q8WWI1 1683 aa13.57□□□□□ -0.24
SYVN1-214ENST00000532771 CAMTA1Q9Y6Y1 1673 aa13.57□□□□□ -0.24
SYVN1-214ENST00000532771 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
SYVN1-214ENST00000532771 EP400Q96L91 3159 aa13.57□□□□□ -0.24
SYVN1-214ENST00000532771 SLIT3O75094 1523 aa13.56□□□□□ -0.24
SYVN1-214ENST00000532771 EVA1CP58658 441 aa13.56□□□□□ -0.24
SYVN1-214ENST00000532771 NLRP6P59044 892 aa13.56□□□□□ -0.24
SYVN1-214ENST00000532771 SF3B2Q13435 895 aaKnown RBP13.56□□□□□ -0.24
SYVN1-214ENST00000532771 CPSF1Q10570 1443 aaKnown RBP13.56□□□□□ -0.24
SYVN1-214ENST00000532771 ZRANB1Q9UGI0 708 aa13.55□□□□□ -0.24
SYVN1-214ENST00000532771 TTC21BQ7Z4L5 1316 aa13.55□□□□□ -0.24
SYVN1-214ENST00000532771 PIK3C2AO00443 1686 aa13.54□□□□□ -0.24
SYVN1-214ENST00000532771 AKAP12Q02952 1782 aa13.54□□□□□ -0.24
SYVN1-214ENST00000532771 LARP1Q6PKG0 1096 aaKnown RBP13.54□□□□□ -0.24
SYVN1-214ENST00000532771 BARGINQ6ZT62 677 aa13.54□□□□□ -0.24
SYVN1-214ENST00000532771 DEFB132Q7Z7B7 95 aa13.54□□□□□ -0.24
SYVN1-214ENST00000532771 TTC21AQ8NDW8 1320 aa13.54□□□□□ -0.24
SYVN1-214ENST00000532771 USP35Q9P2H5 1018 aa13.53□□□□□ -0.24
SYVN1-214ENST00000532771 AATKQ6ZMQ8 1374 aa13.53□□□□□ -0.24
SYVN1-214ENST00000532771 COL5A2P05997 1499 aaPredicted RBP13.53□□□□□ -0.24
SYVN1-214ENST00000532771 TCP11L2Q8N4U5 519 aa13.52□□□□□ -0.25
SYVN1-214ENST00000532771 KTN1Q86UP2 1357 aaKnown RBP13.52□□□□□ -0.25
SYVN1-214ENST00000532771 FAM182BQ5T319 152 aa13.51□□□□□ -0.25
SYVN1-214ENST00000532771 THRAP3Q9Y2W1 955 aaKnown RBP13.51□□□□□ -0.25
SYVN1-214ENST00000532771 CD163L1Q9NR16 1453 aa13.5□□□□□ -0.25
SYVN1-214ENST00000532771 ZBTB7CA1YPR0 619 aa13.5□□□□□ -0.25
SYVN1-214ENST00000532771 BAG6P46379 1132 aa13.5□□□□□ -0.25
SYVN1-214ENST00000532771 KCNH5Q8NCM2 988 aa13.5□□□□□ -0.25
SYVN1-214ENST00000532771 PUS7Q96PZ0 661 aaKnown RBP13.5□□□□□ -0.25
SYVN1-214ENST00000532771 MON2Q7Z3U7 1717 aa13.5□□□□□ -0.25
SYVN1-214ENST00000532771 CRB1P82279 1406 aa13.49□□□□□ -0.25
SYVN1-214ENST00000532771 FAM196AQ6ZSG2 479 aa13.49□□□□□ -0.25
SYVN1-214ENST00000532771 ARHGEF25Q86VW2 580 aa13.49□□□□□ -0.25
SYVN1-214ENST00000532771 COL18A1P39060 1754 aa13.48□□□□□ -0.25
SYVN1-214ENST00000532771 RGPD1P0DJD0 1748 aa13.48□□□□□ -0.25
SYVN1-214ENST00000532771 TMC1Q8TDI8 760 aa13.48□□□□□ -0.25
SYVN1-214ENST00000532771 TESK2Q96S53 571 aa13.48□□□□□ -0.25
SYVN1-214ENST00000532771 SLC12A5Q9H2X9 1139 aa13.48□□□□□ -0.25
SYVN1-214ENST00000532771 DISP2A7MBM2 1401 aa13.47□□□□□ -0.25
SYVN1-214ENST00000532771 USP31Q70CQ4 1352 aa13.47□□□□□ -0.25
SYVN1-214ENST00000532771 ST20-MTHFSA0A0A6YYL1 179 aa13.47□□□□□ -0.25
SYVN1-214ENST00000532771 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
SYVN1-214ENST00000532771 HDGFL2Q7Z4V5 671 aaPredicted RBP13.47□□□□□ -0.25
SYVN1-214ENST00000532771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.47□□□□□ -0.25
SYVN1-214ENST00000532771 AXIN2Q9Y2T1 843 aa13.47□□□□□ -0.25
SYVN1-214ENST00000532771 NFAT5O94916 1531 aa13.47□□□□□ -0.25
SYVN1-214ENST00000532771 WDR17Q8IZU2 1322 aa13.46□□□□□ -0.25
SYVN1-214ENST00000532771 SOX12O15370 315 aa13.46□□□□□ -0.25
SYVN1-214ENST00000532771 SLC24A1O60721 1099 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms