RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-223ENST00000532678 TRIM52Q96A61 297 aa11.95□□□□□ -0.5
PUM1-223ENST00000532678 C19orf44Q9H6X5 657 aa11.95□□□□□ -0.5
PUM1-223ENST00000532678 RYDENQ9NUL5 291 aaKnown RBP11.95□□□□□ -0.5
PUM1-223ENST00000532678 PPLO60437 1756 aa11.95□□□□□ -0.5
PUM1-223ENST00000532678 NLRP6P59044 892 aa11.94□□□□□ -0.5
PUM1-223ENST00000532678 NKX1-1Q15270 411 aaPredicted RBP11.94□□□□□ -0.5
PUM1-223ENST00000532678 BRINP3Q76B58 766 aa11.94□□□□□ -0.5
PUM1-223ENST00000532678 MFRPQ9BY79 579 aa11.94□□□□□ -0.5
PUM1-223ENST00000532678 DCCP43146 1447 aa11.94□□□□□ -0.5
PUM1-223ENST00000532678 ADGRL3Q9HAR2 1447 aa11.94□□□□□ -0.5
PUM1-223ENST00000532678 FBXO22Q8NEZ5 403 aa11.93□□□□□ -0.5
PUM1-223ENST00000532678 DDX17Q92841 729 aaKnown RBP11.93□□□□□ -0.5
PUM1-223ENST00000532678 POTEFA5A3E0 1075 aa11.92□□□□□ -0.5
PUM1-223ENST00000532678 TRIM26Q12899 539 aaPredicted RBP11.92□□□□□ -0.5
PUM1-223ENST00000532678 MEX3CQ5U5Q3 659 aaKnown RBP11.92□□□□□ -0.5
PUM1-223ENST00000532678 PDCD7Q8N8D1 485 aaKnown RBP11.92□□□□□ -0.5
PUM1-223ENST00000532678 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.54e-20■■□□□ 12.6
PUM1-223ENST00000532678 NUTM2BA6NNL0 878 aaPredicted RBP11.91□□□□□ -0.5
PUM1-223ENST00000532678 NUTM2EB1AL46 878 aaPredicted RBP11.91□□□□□ -0.5
PUM1-223ENST00000532678 NUTM2AQ8IVF1 878 aaPredicted RBP11.91□□□□□ -0.5
PUM1-223ENST00000532678 SEC24BO95487 1268 aa11.9□□□□□ -0.5
PUM1-223ENST00000532678 PLCG2P16885 1265 aa11.9□□□□□ -0.5
PUM1-223ENST00000532678 COLQQ9Y215 455 aaPredicted RBP11.9□□□□□ -0.5
PUM1-223ENST00000532678 ROBO2Q9HCK4 1378 aa11.9□□□□□ -0.5
PUM1-223ENST00000532678 SPATA31A6Q5VVP1 1343 aa11.89□□□□□ -0.51
PUM1-223ENST00000532678 PHF8Q9UPP1 1060 aa11.89□□□□□ -0.51
PUM1-223ENST00000532678 IFT172Q9UG01 1749 aa11.89□□□□□ -0.51
PUM1-223ENST00000532678 ACIN1Q9UKV3 1341 aaKnown RBP11.88□□□□□ -0.51
PUM1-223ENST00000532678 PTCH1Q13635 1447 aa11.88□□□□□ -0.51
PUM1-223ENST00000532678 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.88□□□□□ -0.51
PUM1-223ENST00000532678 C1orf167Q5SNV9 1468 aa11.88□□□□□ -0.51
PUM1-223ENST00000532678 MS4A4AQ96JQ5 239 aa11.87□□□□□ -0.51
PUM1-223ENST00000532678 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
PUM1-223ENST00000532678 MPHOSPH9Q99550 1183 aa11.86□□□□□ -0.51
PUM1-223ENST00000532678 PNPLA6Q8IY17 1366 aa11.86□□□□□ -0.51
PUM1-223ENST00000532678 HRCP23327 699 aa11.85□□□□□ -0.51
PUM1-223ENST00000532678 LAMC1P11047 1609 aa11.85□□□□□ -0.51
PUM1-223ENST00000532678 AFF2P51816 1311 aa11.84□□□□□ -0.51
PUM1-223ENST00000532678 ADGRF5Q8IZF2 1346 aa11.84□□□□□ -0.51
PUM1-223ENST00000532678 ORAI2Q96SN7 254 aa11.83□□□□□ -0.52
PUM1-223ENST00000532678 CCDC144AA2RUR9 1427 aa11.83□□□□□ -0.52
PUM1-223ENST00000532678 PRAG1Q86YV5 1406 aa11.83□□□□□ -0.52
PUM1-223ENST00000532678 CDC42BPGQ6DT37 1551 aa11.83□□□□□ -0.52
PUM1-223ENST00000532678 ZNF772Q68DY9 489 aaPredicted RBP11.82□□□□□ -0.52
PUM1-223ENST00000532678 L3MBTL3Q96JM7 780 aaPredicted RBP11.82□□□□□ -0.52
PUM1-223ENST00000532678 C8orf37Q96NL8 207 aa11.82□□□□□ -0.52
PUM1-223ENST00000532678 SPATA31E1Q6ZUB1 1445 aa11.82□□□□□ -0.52
PUM1-223ENST00000532678 KNDC1Q76NI1 1749 aa11.82□□□□□ -0.52
PUM1-223ENST00000532678 RGL3Q3MIN7 710 aa11.81□□□□□ -0.52
PUM1-223ENST00000532678 RPGRIP1LQ68CZ1 1315 aa11.81□□□□□ -0.52
PUM1-223ENST00000532678 PLEKHH1Q9ULM0 1364 aa11.8□□□□□ -0.52
PUM1-223ENST00000532678 RGS12O14924 1447 aa11.8□□□□□ -0.52
PUM1-223ENST00000532678 SPRYD3Q8NCJ5 442 aa11.8□□□□□ -0.52
PUM1-223ENST00000532678 LRRC59Q96AG4 307 aaKnown RBP11.8□□□□□ -0.52
PUM1-223ENST00000532678 STK26Q9P289 416 aa11.8□□□□□ -0.52
PUM1-223ENST00000532678 NUTM2FA1L443 756 aa11.79□□□□□ -0.52
PUM1-223ENST00000532678 ADAMTS2O95450 1211 aa11.79□□□□□ -0.52
PUM1-223ENST00000532678 TMEM121BQ9BXQ6 578 aaPredicted RBP11.79□□□□□ -0.52
PUM1-223ENST00000532678 COL22A1Q8NFW1 1626 aaPredicted RBP11.78□□□□□ -0.52
PUM1-223ENST00000532678 FMN2Q9NZ56 1722 aa11.78□□□□□ -0.52
PUM1-223ENST00000532678 RXRBP28702 533 aa11.78□□□□□ -0.52
PUM1-223ENST00000532678 XPCQ01831 940 aaPredicted RBP11.78□□□□□ -0.52
PUM1-223ENST00000532678 TMEM132EQ6IEE7 984 aa11.78□□□□□ -0.52
PUM1-223ENST00000532678 WAPLQ7Z5K2 1190 aa11.78□□□□□ -0.52
PUM1-223ENST00000532678 PCGF6Q9BYE7 350 aa11.78□□□□□ -0.52
PUM1-223ENST00000532678 PIK3C2GO75747 1445 aa11.77□□□□□ -0.52
PUM1-223ENST00000532678 PXDNQ92626 1479 aa11.77□□□□□ -0.52
PUM1-223ENST00000532678 CDK12Q9NYV4 1490 aaPredicted RBP11.77□□□□□ -0.52
PUM1-223ENST00000532678 DPY19L2Q6NUT2 758 aa11.77□□□□□ -0.53
PUM1-223ENST00000532678 UPF1Q92900 1129 aaKnown RBP eCLIP11.77□□□□□ -0.53
PUM1-223ENST00000532678 SOS2Q07890 1332 aaPredicted RBP11.77□□□□□ -0.53
PUM1-223ENST00000532678 RGPD8O14715 1765 aaPredicted RBP11.77□□□□□ -0.53
PUM1-223ENST00000532678 TECPR2O15040 1411 aa11.77□□□□□ -0.53
PUM1-223ENST00000532678 POTEB2H3BUK9 544 aa11.76□□□□□ -0.53
PUM1-223ENST00000532678 MARF1Q9Y4F3 1742 aaKnown RBP11.76□□□□□ -0.53
PUM1-223ENST00000532678 LRPPRCP42704 1394 aaKnown RBP11.76□□□□□ -0.53
PUM1-223ENST00000532678 ANKRD30BQ9BXX2 1392 aa11.76□□□□□ -0.53
PUM1-223ENST00000532678 MYOM2P54296 1465 aa11.76□□□□□ -0.53
PUM1-223ENST00000532678 ESCO1Q5FWF5 840 aa11.75□□□□□ -0.53
PUM1-223ENST00000532678 BOLA1Q9Y3E2 137 aa11.75□□□□□ -0.53
PUM1-223ENST00000532678 DHX57Q6P158 1386 aaKnown RBP11.75□□□□□ -0.53
PUM1-223ENST00000532678 YTHDC2Q9H6S0 1430 aaKnown RBP11.75□□□□□ -0.53
PUM1-223ENST00000532678 MAMSTRQ6ZN01 415 aa11.74□□□□□ -0.53
PUM1-223ENST00000532678 NGLY1Q96IV0 654 aa11.74□□□□□ -0.53
PUM1-223ENST00000532678 QTRT2Q9H974 415 aaKnown RBP11.74□□□□□ -0.53
PUM1-223ENST00000532678 POTEJP0CG39 1038 aa11.73□□□□□ -0.53
PUM1-223ENST00000532678 KIF1AQ12756 1690 aa11.73□□□□□ -0.53
PUM1-223ENST00000532678 LHX8Q68G74 356 aa11.73□□□□□ -0.53
PUM1-223ENST00000532678 NRXN1Q9ULB1 1477 aa11.72□□□□□ -0.53
PUM1-223ENST00000532678 ABCC11Q96J66 1382 aa11.72□□□□□ -0.53
PUM1-223ENST00000532678 FOXO3O43524 673 aa11.72□□□□□ -0.53
PUM1-223ENST00000532678 PPP1R37O75864 691 aa11.72□□□□□ -0.53
PUM1-223ENST00000532678 NPHP3Q7Z494 1330 aa11.71□□□□□ -0.53
PUM1-223ENST00000532678 RBM6P78332 1123 aaKnown RBP11.71□□□□□ -0.53
PUM1-223ENST00000532678 PAXIP1Q6ZW49 1069 aaPredicted RBP11.71□□□□□ -0.53
PUM1-223ENST00000532678 MICALL2Q8IY33 904 aa11.71□□□□□ -0.53
PUM1-223ENST00000532678 ABCA3Q99758 1704 aa11.71□□□□□ -0.54
PUM1-223ENST00000532678 ATRNO75882 1429 aa11.7□□□□□ -0.54
PUM1-223ENST00000532678 G3V3G9 751 aa11.7□□□□□ -0.54
PUM1-223ENST00000532678 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms