RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 NBPF8Q3BBV2 869 aa22.71■■□□□ 1.23
LDLRAD3-205ENST00000532490 ACEP12821 1306 aa22.71■■□□□ 1.23
LDLRAD3-205ENST00000532490 GLI3P10071 1580 aa22.71■■□□□ 1.23
LDLRAD3-205ENST00000532490 PLCH1Q4KWH8 1693 aa22.71■■□□□ 1.23
LDLRAD3-205ENST00000532490 NWD2Q9ULI1 1742 aa22.71■■□□□ 1.23
LDLRAD3-205ENST00000532490 RALGAPBQ86X10 1494 aa22.69■■□□□ 1.22
LDLRAD3-205ENST00000532490 PAK3O75914 559 aaPredicted RBP22.69■■□□□ 1.22
LDLRAD3-205ENST00000532490 ROCK2O75116 1388 aaKnown RBP22.68■■□□□ 1.22
LDLRAD3-205ENST00000532490 CABP2Q9NPB3 220 aa22.68■■□□□ 1.22
LDLRAD3-205ENST00000532490 SRPK2P78362 688 aaKnown RBP22.67■■□□□ 1.22
LDLRAD3-205ENST00000532490 VPS72Q15906 364 aa22.67■■□□□ 1.22
LDLRAD3-205ENST00000532490 PPIP5K1Q6PFW1 1433 aa22.65■■□□□ 1.22
LDLRAD3-205ENST00000532490 ATAD2Q6PL18 1390 aa22.64■■□□□ 1.22
LDLRAD3-205ENST00000532490 NRAPQ86VF7 1730 aa22.64■■□□□ 1.21
LDLRAD3-205ENST00000532490 COL14A1Q05707 1796 aaKnown RBP22.63■■□□□ 1.21
LDLRAD3-205ENST00000532490 ONECUT3O60422 494 aaPredicted RBP22.62■■□□□ 1.21
LDLRAD3-205ENST00000532490 BTG4Q9NY30 223 aa22.61■■□□□ 1.21
LDLRAD3-205ENST00000532490 PHRF1Q9P1Y6 1649 aaKnown RBP22.6■■□□□ 1.21
LDLRAD3-205ENST00000532490 EP400Q96L91 3159 aa22.6■■□□□ 1.21
LDLRAD3-205ENST00000532490 EVC2Q86UK5 1308 aa22.6■■□□□ 1.21
LDLRAD3-205ENST00000532490 CABP1Q9NZU7 370 aa22.6■■□□□ 1.21
LDLRAD3-205ENST00000532490 NUTM2GQ5VZR2 741 aa22.59■■□□□ 1.21
LDLRAD3-205ENST00000532490 TONSLQ96HA7 1378 aa22.59■■□□□ 1.21
LDLRAD3-205ENST00000532490 BRWD3Q6RI45 1802 aa22.57■■□□□ 1.2
LDLRAD3-205ENST00000532490 SEPT12Q8IYM1 358 aa22.57■■□□□ 1.2
LDLRAD3-205ENST00000532490 ABTB2Q8N961 1025 aa22.57■■□□□ 1.2
LDLRAD3-205ENST00000532490 PRDM11Q9NQV5 511 aa22.57■■□□□ 1.2
LDLRAD3-205ENST00000532490 BRD4O60885 1362 aaPredicted RBP22.57■■□□□ 1.2
LDLRAD3-205ENST00000532490 KIAA0232Q92628 1395 aa22.57■■□□□ 1.2
LDLRAD3-205ENST00000532490 USP19O94966 1318 aa22.57■■□□□ 1.2
LDLRAD3-205ENST00000532490 CCDC9Q9Y3X0 531 aaKnown RBP22.56■■□□□ 1.2
LDLRAD3-205ENST00000532490 USP6P35125 1406 aa22.55■■□□□ 1.2
LDLRAD3-205ENST00000532490 SSH2Q76I76 1423 aa22.55■■□□□ 1.2
LDLRAD3-205ENST00000532490 SBNO2Q9Y2G9 1366 aa22.54■■□□□ 1.2
LDLRAD3-205ENST00000532490 CARD11Q9BXL7 1154 aa22.54■■□□□ 1.2
LDLRAD3-205ENST00000532490 NRKQ7Z2Y5 1582 aa22.54■■□□□ 1.2
LDLRAD3-205ENST00000532490 ZC3H6P61129 1189 aaKnown RBP22.53■■□□□ 1.2
LDLRAD3-205ENST00000532490 CHRNA2Q15822 529 aa22.53■■□□□ 1.2
LDLRAD3-205ENST00000532490 SPATA31A5Q5VU36 1347 aa22.53■■□□□ 1.2
LDLRAD3-205ENST00000532490 SPATA31A7Q8IWB4 1347 aa22.53■■□□□ 1.2
LDLRAD3-205ENST00000532490 NLRP13Q86W25 1043 aa22.51■■□□□ 1.19
LDLRAD3-205ENST00000532490 CPDO75976 1380 aa22.5■■□□□ 1.19
LDLRAD3-205ENST00000532490 CCDC125Q86Z20 511 aa22.5■■□□□ 1.19
LDLRAD3-205ENST00000532490 GCP02774 474 aa22.49■■□□□ 1.19
LDLRAD3-205ENST00000532490 FAM98CQ17RN3 349 aaKnown RBP22.49■■□□□ 1.19
LDLRAD3-205ENST00000532490 AKAP12Q02952 1782 aa22.48■■□□□ 1.19
LDLRAD3-205ENST00000532490 ZNF692Q9BU19 519 aaPredicted RBP22.48■■□□□ 1.19
LDLRAD3-205ENST00000532490 CPSF1Q10570 1443 aaKnown RBP22.48■■□□□ 1.19
LDLRAD3-205ENST00000532490 LMO7Q8WWI1 1683 aa22.47■■□□□ 1.19
LDLRAD3-205ENST00000532490 KRT27Q7Z3Y8 459 aa22.47■■□□□ 1.19
LDLRAD3-205ENST00000532490 PIK3C2AO00443 1686 aa22.46■■□□□ 1.19
LDLRAD3-205ENST00000532490 CAMTA1Q9Y6Y1 1673 aa22.46■■□□□ 1.19
LDLRAD3-205ENST00000532490 SPATA31A1Q5TZJ5 1347 aa22.46■■□□□ 1.19
LDLRAD3-205ENST00000532490 NLRP6P59044 892 aa22.45■■□□□ 1.18
LDLRAD3-205ENST00000532490 TTC21BQ7Z4L5 1316 aa22.45■■□□□ 1.18
LDLRAD3-205ENST00000532490 SLIT3O75094 1523 aa22.45■■□□□ 1.18
LDLRAD3-205ENST00000532490 THSD7AQ9UPZ6 1657 aa22.45■■□□□ 1.18
LDLRAD3-205ENST00000532490 BLMP54132 1417 aaPredicted RBP22.44■■□□□ 1.18
LDLRAD3-205ENST00000532490 STRN4Q9NRL3 753 aa22.44■■□□□ 1.18
LDLRAD3-205ENST00000532490 CD163L1Q9NR16 1453 aa22.41■■□□□ 1.18
LDLRAD3-205ENST00000532490 TTC21AQ8NDW8 1320 aa22.4■■□□□ 1.18
LDLRAD3-205ENST00000532490 A0A0G2JS52 829 aa22.4■■□□□ 1.18
LDLRAD3-205ENST00000532490 MYT1Q01538 1121 aa22.4■■□□□ 1.18
LDLRAD3-205ENST00000532490 TESK2Q96S53 571 aa22.4■■□□□ 1.18
LDLRAD3-205ENST00000532490 MON2Q7Z3U7 1717 aa22.4■■□□□ 1.18
LDLRAD3-205ENST00000532490 KTN1Q86UP2 1357 aaKnown RBP22.39■■□□□ 1.18
LDLRAD3-205ENST00000532490 EVA1CP58658 441 aa22.39■■□□□ 1.17
LDLRAD3-205ENST00000532490 LARP1Q6PKG0 1096 aaKnown RBP22.39■■□□□ 1.17
LDLRAD3-205ENST00000532490 PUS7Q96PZ0 661 aaKnown RBP22.39■■□□□ 1.17
LDLRAD3-205ENST00000532490 COL18A1P39060 1754 aa22.38■■□□□ 1.17
LDLRAD3-205ENST00000532490 AATKQ6ZMQ8 1374 aa22.38■■□□□ 1.17
LDLRAD3-205ENST00000532490 COL5A2P05997 1499 aaPredicted RBP22.37■■□□□ 1.17
LDLRAD3-205ENST00000532490 ST20-MTHFSA0A0A6YYL1 179 aa22.37■■□□□ 1.17
LDLRAD3-205ENST00000532490 BARGINQ6ZT62 677 aa22.37■■□□□ 1.17
LDLRAD3-205ENST00000532490 SLC12A5Q9H2X9 1139 aa22.36■■□□□ 1.17
LDLRAD3-205ENST00000532490 USP35Q9P2H5 1018 aa22.35■■□□□ 1.17
LDLRAD3-205ENST00000532490 FAM182BQ5T319 152 aa22.34■■□□□ 1.17
LDLRAD3-205ENST00000532490 DEFB132Q7Z7B7 95 aa22.34■■□□□ 1.17
LDLRAD3-205ENST00000532490 ARHGEF25Q86VW2 580 aa22.34■■□□□ 1.17
LDLRAD3-205ENST00000532490 TCP11L2Q8N4U5 519 aa22.33■■□□□ 1.17
LDLRAD3-205ENST00000532490 KCNH5Q8NCM2 988 aa22.33■■□□□ 1.17
LDLRAD3-205ENST00000532490 TMC1Q8TDI8 760 aa22.33■■□□□ 1.17
LDLRAD3-205ENST00000532490 AXIN2Q9Y2T1 843 aa22.33■■□□□ 1.17
LDLRAD3-205ENST00000532490 USP31Q70CQ4 1352 aa22.33■■□□□ 1.17
LDLRAD3-205ENST00000532490 ZRANB1Q9UGI0 708 aa22.32■■□□□ 1.16
LDLRAD3-205ENST00000532490 THRAP3Q9Y2W1 955 aaKnown RBP22.32■■□□□ 1.16
LDLRAD3-205ENST00000532490 CLSPNQ9HAW4 1339 aa22.31■■□□□ 1.16
LDLRAD3-205ENST00000532490 NFAT5O94916 1531 aa22.31■■□□□ 1.16
LDLRAD3-205ENST00000532490 USP54Q70EL1 1684 aa22.31■■□□□ 1.16
LDLRAD3-205ENST00000532490 ZBTB7CA1YPR0 619 aa22.31■■□□□ 1.16
LDLRAD3-205ENST00000532490 SF3B2Q13435 895 aaKnown RBP22.31■■□□□ 1.16
LDLRAD3-205ENST00000532490 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.31■■□□□ 1.16
LDLRAD3-205ENST00000532490 TIMELESSQ9UNS1 1208 aa22.31■■□□□ 1.16
LDLRAD3-205ENST00000532490 CRB1P82279 1406 aa22.31■■□□□ 1.16
LDLRAD3-205ENST00000532490 HDGFL2Q7Z4V5 671 aaPredicted RBP22.3■■□□□ 1.16
LDLRAD3-205ENST00000532490 A0A1W2PP64 1363 aa22.29■■□□□ 1.16
LDLRAD3-205ENST00000532490 SLC24A1O60721 1099 aa22.29■■□□□ 1.16
LDLRAD3-205ENST00000532490 NME9Q86XW9 330 aa22.29■■□□□ 1.16
LDLRAD3-205ENST00000532490 PCGF6Q9BYE7 350 aa22.29■■□□□ 1.16
LDLRAD3-205ENST00000532490 TERF2IPQ9NYB0 399 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms