RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 FAM177A1Q8N128 213 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-231ENST00000532463 JMYQ8N9B5 988 aa9.61□□□□□ -0.87
CTNND1-231ENST00000532463 EEA1Q15075 1411 aa9.6□□□□□ -0.87
CTNND1-231ENST00000532463 PSMA5P28066 241 aa9.6□□□□□ -0.87
CTNND1-231ENST00000532463 DNAJC2Q99543 621 aaKnown RBP9.6□□□□□ -0.87
CTNND1-231ENST00000532463 CPSF2Q9P2I0 782 aaKnown RBP9.6□□□□□ -0.87
CTNND1-231ENST00000532463 NOL3O60936 208 aaKnown RBP9.6□□□□□ -0.87
CTNND1-231ENST00000532463 UBE4AQ14139 1066 aa9.6□□□□□ -0.87
CTNND1-231ENST00000532463 CCDC160A6NGH7 325 aa9.6□□□□□ -0.87
CTNND1-231ENST00000532463 IFFO1Q0D2I5 559 aa9.6□□□□□ -0.87
CTNND1-231ENST00000532463 TIGD1Q96MW7 591 aa9.6□□□□□ -0.87
CTNND1-231ENST00000532463 SWAP70Q9UH65 585 aa9.6□□□□□ -0.87
CTNND1-231ENST00000532463 CEP83Q9Y592 693 aa9.6□□□□□ -0.87
CTNND1-231ENST00000532463 ANAPC15P60006 121 aa9.59□□□□□ -0.87
CTNND1-231ENST00000532463 PUS7Q96PZ0 661 aaKnown RBP9.59□□□□□ -0.87
CTNND1-231ENST00000532463 FILIP1Q7Z7B0 1213 aa9.59□□□□□ -0.87
CTNND1-231ENST00000532463 C22orf23Q9BZE7 217 aa9.59□□□□□ -0.87
CTNND1-231ENST00000532463 CCNB3Q8WWL7 1395 aa9.59□□□□□ -0.87
CTNND1-231ENST00000532463 FERP16591 822 aa9.59□□□□□ -0.87
CTNND1-231ENST00000532463 TDO2P48775 406 aa9.59□□□□□ -0.87
CTNND1-231ENST00000532463 CBX1P83916 185 aa9.59□□□□□ -0.87
CTNND1-231ENST00000532463 ARHGAP29Q52LW3 1261 aa9.59□□□□□ -0.87
CTNND1-231ENST00000532463 VPS37DQ86XT2 251 aa9.59□□□□□ -0.87
CTNND1-231ENST00000532463 BBXQ8WY36 941 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-231ENST00000532463 TRERF1Q96PN7 1200 aa9.59□□□□□ -0.87
CTNND1-231ENST00000532463 ERC2O15083 957 aa9.59□□□□□ -0.87
CTNND1-231ENST00000532463 EPB41L2O43491 1005 aaKnown RBP9.59□□□□□ -0.87
CTNND1-231ENST00000532463 SAFB2Q14151 953 aaKnown RBP eCLIP9.59□□□□□ -0.87
CTNND1-231ENST00000532463 TANGO6Q9C0B7 1094 aa9.59□□□□□ -0.87
CTNND1-231ENST00000532463 SUDS3Q9H7L9 328 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-231ENST00000532463 KANK1Q14678 1352 aa9.59□□□□□ -0.87
CTNND1-231ENST00000532463 IMMTQ16891 758 aaKnown RBP9.58□□□□□ -0.88
CTNND1-231ENST00000532463 CCDC6Q16204 474 aa9.58□□□□□ -0.88
CTNND1-231ENST00000532463 SMARCC1Q92922 1105 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-231ENST00000532463 PRDM10Q9NQV6 1147 aa9.58□□□□□ -0.88
CTNND1-231ENST00000532463 DDX19BQ9UMR2 479 aa9.58□□□□□ -0.88
CTNND1-231ENST00000532463 STK38Q15208 465 aa9.58□□□□□ -0.88
CTNND1-231ENST00000532463 DZIP1LQ8IYY4 767 aaKnown RBP9.58□□□□□ -0.88
CTNND1-231ENST00000532463 BAZ1BQ9UIG0 1483 aaKnown RBP9.58□□□□□ -0.88
CTNND1-231ENST00000532463 VGFO15240 615 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-231ENST00000532463 HSPA4P34932 840 aa9.58□□□□□ -0.88
CTNND1-231ENST00000532463 GTF2F1P35269 517 aaKnown RBP eCLIP9.58□□□□□ -0.885e-6■■■□□ 17.8
CTNND1-231ENST00000532463 SART3Q15020 963 aaKnown RBP9.58□□□□□ -0.88
CTNND1-231ENST00000532463 TRHP20396 242 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-231ENST00000532463 NLRP13Q86W25 1043 aa9.57□□□□□ -0.88
CTNND1-231ENST00000532463 FEZ2Q9UHY8 353 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-231ENST00000532463 GSTTP1A0A1W2PQM5 241 aa9.57□□□□□ -0.88
CTNND1-231ENST00000532463 ESPNB1AK53 854 aa9.57□□□□□ -0.88
CTNND1-231ENST00000532463 MCM2P49736 904 aa9.57□□□□□ -0.88
CTNND1-231ENST00000532463 C9orf78Q9NZ63 289 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-231ENST00000532463 HOOK3Q86VS8 718 aa9.57□□□□□ -0.88
CTNND1-231ENST00000532463 ROCK1Q13464 1354 aa9.57□□□□□ -0.88
CTNND1-231ENST00000532463 PRPF40AO75400 957 aaKnown RBP9.57□□□□□ -0.88
CTNND1-231ENST00000532463 G3BP1Q13283 466 aaKnown RBP eCLIP9.57□□□□□ -0.888e-9■□□□□ 11.1
CTNND1-231ENST00000532463 IL27Q8NEV9 243 aa9.57□□□□□ -0.88
CTNND1-231ENST00000532463 MIPOL1Q8TD10 442 aa9.57□□□□□ -0.88
CTNND1-231ENST00000532463 ERCC6Q03468 1493 aa9.56□□□□□ -0.88
CTNND1-231ENST00000532463 E9PSI1 815 aa9.56□□□□□ -0.88
CTNND1-231ENST00000532463 ZFYP08048 801 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-231ENST00000532463 POTEJP0CG39 1038 aa9.56□□□□□ -0.88
CTNND1-231ENST00000532463 DYNC1I1O14576 645 aa9.56□□□□□ -0.88
CTNND1-231ENST00000532463 PLIN1O60240 522 aa9.56□□□□□ -0.88
CTNND1-231ENST00000532463 HMGB1P09429 215 aaKnown RBP9.56□□□□□ -0.88
CTNND1-231ENST00000532463 TERF2IPQ9NYB0 399 aa9.56□□□□□ -0.88
CTNND1-231ENST00000532463 TNMDQ9H2S6 317 aa9.56□□□□□ -0.88
CTNND1-231ENST00000532463 POTEB2H3BUK9 544 aa9.55□□□□□ -0.88
CTNND1-231ENST00000532463 SPECC1Q5M775 1068 aa9.55□□□□□ -0.88
CTNND1-231ENST00000532463 SAMD1Q6SPF0 538 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-231ENST00000532463 ZSCAN12O43309 604 aa9.55□□□□□ -0.88
CTNND1-231ENST00000532463 SARNPP82979 210 aaKnown RBP9.55□□□□□ -0.88
CTNND1-231ENST00000532463 CCDC27Q2M243 656 aa9.55□□□□□ -0.88
CTNND1-231ENST00000532463 RRP1P56182 461 aaKnown RBP9.55□□□□□ -0.88
CTNND1-231ENST00000532463 GRPEL1Q9HAV7 217 aa9.55□□□□□ -0.88
CTNND1-231ENST00000532463 RFC1P35251 1148 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-231ENST00000532463 RPUSD2Q8IZ73 545 aaKnown RBP9.55□□□□□ -0.88
CTNND1-231ENST00000532463 HOMER2Q9NSB8 354 aa9.55□□□□□ -0.88
CTNND1-231ENST00000532463 ATP2B1P20020 1258 aa9.54□□□□□ -0.88
CTNND1-231ENST00000532463 EXOC6Q8TAG9 804 aa9.54□□□□□ -0.88
CTNND1-231ENST00000532463 CDC45O75419 566 aa9.54□□□□□ -0.88
CTNND1-231ENST00000532463 TRIM21P19474 475 aaKnown RBP9.54□□□□□ -0.88
CTNND1-231ENST00000532463 CEP57L1Q8IYX8 460 aa9.54□□□□□ -0.88
CTNND1-231ENST00000532463 API5Q9BZZ5 524 aaKnown RBP9.54□□□□□ -0.88
CTNND1-231ENST00000532463 CTR9Q6PD62 1173 aa9.54□□□□□ -0.88
CTNND1-231ENST00000532463 ERC1Q8IUD2 1116 aa9.54□□□□□ -0.88
CTNND1-231ENST00000532463 TAOK3Q9H2K8 898 aa9.54□□□□□ -0.88
CTNND1-231ENST00000532463 FIBPO43427 364 aa9.54□□□□□ -0.88
CTNND1-231ENST00000532463 IKQ13123 557 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-231ENST00000532463 PTPN14Q15678 1187 aa9.54□□□□□ -0.88
CTNND1-231ENST00000532463 ZNF397Q8NF99 534 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-231ENST00000532463 KIF18AQ8NI77 898 aa9.54□□□□□ -0.88
CTNND1-231ENST00000532463 CRBNQ96SW2 442 aa9.54□□□□□ -0.88
CTNND1-231ENST00000532463 SMTNL1A8MU46 457 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 SERPINA10Q9UK55 444 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 FSD2A1L4K1 749 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 ZSCAN30Q86W11 494 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 GTPBP4Q9BZE4 634 aaKnown RBP9.53□□□□□ -0.88
CTNND1-231ENST00000532463 COG6Q9Y2V7 657 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 NINLQ9Y2I6 1382 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 AMPHP49418 695 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 ANAPC4Q9UJX5 808 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms