RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 PSME1Q06323 249 aa24.56■■□□□ 1.52
PPP1CA-208ENST00000532446 TTC21BQ7Z4L5 1316 aa24.55■■□□□ 1.52
PPP1CA-208ENST00000532446 ROBO1Q9Y6N7 1651 aa24.55■■□□□ 1.52
PPP1CA-208ENST00000532446 NPHP3Q7Z494 1330 aa24.55■■□□□ 1.52
PPP1CA-208ENST00000532446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.54■■□□□ 1.52
PPP1CA-208ENST00000532446 TRPM3Q9HCF6 1732 aaPredicted RBP24.54■■□□□ 1.52
PPP1CA-208ENST00000532446 NHSL1Q5SYE7 1610 aa24.53■■□□□ 1.52
PPP1CA-208ENST00000532446 TTC21AQ8NDW8 1320 aa24.53■■□□□ 1.52
PPP1CA-208ENST00000532446 NSD2O96028 1365 aa24.53■■□□□ 1.52
PPP1CA-208ENST00000532446 FYB1O15117 783 aa24.52■■□□□ 1.52
PPP1CA-208ENST00000532446 CC2D1BQ5T0F9 858 aaKnown RBP24.52■■□□□ 1.52
PPP1CA-208ENST00000532446 KRT28Q7Z3Y7 464 aa24.52■■□□□ 1.52
PPP1CA-208ENST00000532446 ANKRD26Q9UPS8 1709 aa24.52■■□□□ 1.52
PPP1CA-208ENST00000532446 ANP32CO43423 234 aa24.51■■□□□ 1.51
PPP1CA-208ENST00000532446 DDX17Q92841 729 aaKnown RBP24.51■■□□□ 1.51
PPP1CA-208ENST00000532446 PXDNQ92626 1479 aa24.51■■□□□ 1.51
PPP1CA-208ENST00000532446 PRKRIP1Q9H875 184 aaPredicted RBP24.51■■□□□ 1.51
PPP1CA-208ENST00000532446 XPCQ01831 940 aaPredicted RBP24.5■■□□□ 1.51
PPP1CA-208ENST00000532446 NME9Q86XW9 330 aa24.5■■□□□ 1.51
PPP1CA-208ENST00000532446 PIK3C2AO00443 1686 aa24.49■■□□□ 1.51
PPP1CA-208ENST00000532446 CNGB1Q14028 1251 aaPredicted RBP24.49■■□□□ 1.51
PPP1CA-208ENST00000532446 ILDR2Q71H61 639 aa24.49■■□□□ 1.51
PPP1CA-208ENST00000532446 GGNBP2Q9H3C7 697 aa24.48■■□□□ 1.51
PPP1CA-208ENST00000532446 PARD3Q8TEW0 1356 aa24.48■■□□□ 1.51
PPP1CA-208ENST00000532446 MED1Q15648 1581 aaPredicted RBP24.48■■□□□ 1.51
PPP1CA-208ENST00000532446 SBNO1A3KN83 1393 aa24.47■■□□□ 1.51
PPP1CA-208ENST00000532446 ALS2Q96Q42 1657 aa24.46■■□□□ 1.51
PPP1CA-208ENST00000532446 AHDC1Q5TGY3 1603 aaPredicted RBP24.46■■□□□ 1.51
PPP1CA-208ENST00000532446 SOS2Q07890 1332 aaPredicted RBP24.46■■□□□ 1.51
PPP1CA-208ENST00000532446 PAK3O75914 559 aaPredicted RBP24.46■■□□□ 1.51
PPP1CA-208ENST00000532446 USP54Q70EL1 1684 aa24.46■■□□□ 1.51
PPP1CA-208ENST00000532446 RALBP1Q15311 655 aa24.45■■□□□ 1.51
PPP1CA-208ENST00000532446 ZRANB1Q9UGI0 708 aa24.45■■□□□ 1.5
PPP1CA-208ENST00000532446 USP31Q70CQ4 1352 aa24.44■■□□□ 1.5
PPP1CA-208ENST00000532446 MIER1Q8N108 512 aa24.44■■□□□ 1.5
PPP1CA-208ENST00000532446 OVOS2A0A0J9YW53 1432 aa24.43■■□□□ 1.5
PPP1CA-208ENST00000532446 OVOS2Q6IE36 1432 aa24.43■■□□□ 1.5
PPP1CA-208ENST00000532446 MARF1Q9Y4F3 1742 aaKnown RBP24.43■■□□□ 1.5
PPP1CA-208ENST00000532446 ABTB2Q8N961 1025 aa24.43■■□□□ 1.5
PPP1CA-208ENST00000532446 MORC1Q86VD1 984 aa24.42■■□□□ 1.5
PPP1CA-208ENST00000532446 COG3Q96JB2 828 aa24.41■■□□□ 1.5
PPP1CA-208ENST00000532446 TNS3Q68CZ2 1445 aa24.41■■□□□ 1.5
PPP1CA-208ENST00000532446 SPATA31A3Q5VYP0 1347 aa24.4■■□□□ 1.5
PPP1CA-208ENST00000532446 PHLPP1O60346 1717 aa24.39■■□□□ 1.49
PPP1CA-208ENST00000532446 NLRP6P59044 892 aa24.38■■□□□ 1.49
PPP1CA-208ENST00000532446 MYBBP1AQ9BQG0 1328 aaKnown RBP24.37■■□□□ 1.49
PPP1CA-208ENST00000532446 NUTM2GQ5VZR2 741 aa24.37■■□□□ 1.49
PPP1CA-208ENST00000532446 NLRP13Q86W25 1043 aa24.36■■□□□ 1.49
PPP1CA-208ENST00000532446 ARHGEF10O15013 1369 aa24.36■■□□□ 1.49
PPP1CA-208ENST00000532446 COL16A1Q07092 1604 aaPredicted RBP24.36■■□□□ 1.49
PPP1CA-208ENST00000532446 LMOD2Q6P5Q4 547 aa24.35■■□□□ 1.49
PPP1CA-208ENST00000532446 PPP2R1AP30153 589 aa24.34■■□□□ 1.49
PPP1CA-208ENST00000532446 TNNT2P45379 298 aaPredicted RBP24.33■■□□□ 1.49
PPP1CA-208ENST00000532446 MAP2P11137 1827 aaKnown RBP24.33■■□□□ 1.49
PPP1CA-208ENST00000532446 USP19O94966 1318 aa24.33■■□□□ 1.49
PPP1CA-208ENST00000532446 SLIT3O75094 1523 aa24.32■■□□□ 1.48
PPP1CA-208ENST00000532446 CRYBG1Q9Y4K1 1723 aa24.32■■□□□ 1.48
PPP1CA-208ENST00000532446 LRRC59Q96AG4 307 aaKnown RBP24.32■■□□□ 1.48
PPP1CA-208ENST00000532446 AATKQ6ZMQ8 1374 aa24.31■■□□□ 1.48
PPP1CA-208ENST00000532446 SOCS7O14512 581 aa24.31■■□□□ 1.48
PPP1CA-208ENST00000532446 PHF23Q9BUL5 403 aaPredicted RBP24.31■■□□□ 1.48
PPP1CA-208ENST00000532446 CCER2I3L3R5 266 aa24.29■■□□□ 1.48
PPP1CA-208ENST00000532446 FBLN1P23142 703 aa24.28■■□□□ 1.48
PPP1CA-208ENST00000532446 PHRF1Q9P1Y6 1649 aaKnown RBP24.28■■□□□ 1.48
PPP1CA-208ENST00000532446 NFAT5O94916 1531 aa24.28■■□□□ 1.48
PPP1CA-208ENST00000532446 KCNH5Q8NCM2 988 aa24.26■■□□□ 1.47
PPP1CA-208ENST00000532446 COL22A1Q8NFW1 1626 aaPredicted RBP24.26■■□□□ 1.47
PPP1CA-208ENST00000532446 GCP02774 474 aa24.26■■□□□ 1.47
PPP1CA-208ENST00000532446 POLKQ9UBT6 870 aa24.26■■□□□ 1.47
PPP1CA-208ENST00000532446 ABCA3Q99758 1704 aa24.25■■□□□ 1.47
PPP1CA-208ENST00000532446 CCDC184Q52MB2 194 aa24.25■■□□□ 1.47
PPP1CA-208ENST00000532446 SMG6Q86US8 1419 aaKnown RBP24.25■■□□□ 1.47
PPP1CA-208ENST00000532446 PNPLA6Q8IY17 1366 aa24.24■■□□□ 1.47
PPP1CA-208ENST00000532446 SOX12O15370 315 aa24.24■■□□□ 1.47
PPP1CA-208ENST00000532446 MTHFSP49914 203 aa24.24■■□□□ 1.47
PPP1CA-208ENST00000532446 JCADQ9P266 1359 aa24.23■■□□□ 1.47
PPP1CA-208ENST00000532446 RRS1Q15050 365 aaKnown RBP24.23■■□□□ 1.47
PPP1CA-208ENST00000532446 CABLES1Q8TDN4 633 aa24.23■■□□□ 1.47
PPP1CA-208ENST00000532446 LTN1O94822 1766 aa24.23■■□□□ 1.47
PPP1CA-208ENST00000532446 PLEKHG5O94827 1062 aa24.22■■□□□ 1.47
PPP1CA-208ENST00000532446 EMILIN1Q9Y6C2 1016 aa24.21■■□□□ 1.47
PPP1CA-208ENST00000532446 MAP3K19Q56UN5 1328 aa24.21■■□□□ 1.47
PPP1CA-208ENST00000532446 PEAK1Q9H792 1746 aa24.2■■□□□ 1.46
PPP1CA-208ENST00000532446 SHPRHQ149N8 1683 aa24.2■■□□□ 1.46
PPP1CA-208ENST00000532446 MRS2Q9HD23 443 aa24.19■■□□□ 1.46
PPP1CA-208ENST00000532446 CDK12Q9NYV4 1490 aaPredicted RBP24.19■■□□□ 1.46
PPP1CA-208ENST00000532446 INSRP06213 1382 aa24.17■■□□□ 1.46
PPP1CA-208ENST00000532446 KIF24Q5T7B8 1368 aa24.17■■□□□ 1.46
PPP1CA-208ENST00000532446 ARHGEF25Q86VW2 580 aa24.17■■□□□ 1.46
PPP1CA-208ENST00000532446 PPM1GO15355 546 aaPredicted RBP24.16■■□□□ 1.46
PPP1CA-208ENST00000532446 RGS17Q9UGC6 210 aaPredicted RBP24.16■■□□□ 1.46
PPP1CA-208ENST00000532446 CFAP53Q96M91 514 aa24.15■■□□□ 1.46
PPP1CA-208ENST00000532446 CPDO75976 1380 aa24.15■■□□□ 1.46
PPP1CA-208ENST00000532446 COL3A1P02461 1466 aaPredicted RBP24.15■■□□□ 1.46
PPP1CA-208ENST00000532446 RTL1A6NKG5 1358 aa24.14■■□□□ 1.46
PPP1CA-208ENST00000532446 FLT4P35916 1363 aa24.14■■□□□ 1.46
PPP1CA-208ENST00000532446 ZC3H6P61129 1189 aaKnown RBP24.13■■□□□ 1.45
PPP1CA-208ENST00000532446 AMPHP49418 695 aa24.13■■□□□ 1.45
PPP1CA-208ENST00000532446 HAP1P54257 671 aaPredicted RBP24.13■■□□□ 1.45
PPP1CA-208ENST00000532446 COL18A1P39060 1754 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms