RNA–Protein interactions for RNA: ENST00000532392.1

CTSB-224, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-224ENST00000532392 TESK2Q96S53 571 aa20.46■□□□□ 0.87
CTSB-224ENST00000532392 ALS2Q96Q42 1657 aa20.45■□□□□ 0.86
CTSB-224ENST00000532392 USP47Q96K76 1375 aa20.45■□□□□ 0.86
CTSB-224ENST00000532392 PUS7Q96PZ0 661 aaKnown RBP20.44■□□□□ 0.86
CTSB-224ENST00000532392 BRD4O60885 1362 aaPredicted RBP20.44■□□□□ 0.86
CTSB-224ENST00000532392 ZNF692Q9BU19 519 aaPredicted RBP20.43■□□□□ 0.86
CTSB-224ENST00000532392 USP21Q9UK80 565 aa20.43■□□□□ 0.86
CTSB-224ENST00000532392 SOCS7O14512 581 aa20.42■□□□□ 0.86
CTSB-224ENST00000532392 QTRT2Q9H974 415 aaKnown RBP20.42■□□□□ 0.86
CTSB-224ENST00000532392 RXRBP28702 533 aa20.41■□□□□ 0.86
CTSB-224ENST00000532392 ABTB2Q8N961 1025 aa20.41■□□□□ 0.86
CTSB-224ENST00000532392 USP6P35125 1406 aa20.41■□□□□ 0.86
CTSB-224ENST00000532392 NUTM2GQ5VZR2 741 aa20.4■□□□□ 0.86
CTSB-224ENST00000532392 MARF1Q9Y4F3 1742 aaKnown RBP20.39■□□□□ 0.86
CTSB-224ENST00000532392 TMC1Q8TDI8 760 aa20.38■□□□□ 0.85
CTSB-224ENST00000532392 TRPC5Q9UL62 973 aaPredicted RBP20.38■□□□□ 0.85
CTSB-224ENST00000532392 CPSF1Q10570 1443 aaKnown RBP20.37■□□□□ 0.85
CTSB-224ENST00000532392 ABCA3Q99758 1704 aa20.37■□□□□ 0.85
CTSB-224ENST00000532392 FAM83GA6ND36 823 aa20.37■□□□□ 0.85
CTSB-224ENST00000532392 TMF1P82094 1093 aa20.37■□□□□ 0.85
CTSB-224ENST00000532392 NLRP13Q86W25 1043 aa20.37■□□□□ 0.85
CTSB-224ENST00000532392 SLC12A5Q9H2X9 1139 aa20.37■□□□□ 0.85
CTSB-224ENST00000532392 BCL9LQ86UU0 1499 aa20.37■□□□□ 0.85
CTSB-224ENST00000532392 SSH2Q76I76 1423 aa20.36■□□□□ 0.85
CTSB-224ENST00000532392 RBM6P78332 1123 aaKnown RBP20.36■□□□□ 0.85
CTSB-224ENST00000532392 SLIT2O94813 1529 aa20.36■□□□□ 0.85
CTSB-224ENST00000532392 UNC5CLQ8IV45 518 aa20.35■□□□□ 0.85
CTSB-224ENST00000532392 KTN1Q86UP2 1357 aaKnown RBP20.34■□□□□ 0.85
CTSB-224ENST00000532392 TTC21BQ7Z4L5 1316 aa20.34■□□□□ 0.85
CTSB-224ENST00000532392 ATRNO75882 1429 aa20.34■□□□□ 0.85
CTSB-224ENST00000532392 USP19O94966 1318 aa20.33■□□□□ 0.85
CTSB-224ENST00000532392 NLRP6P59044 892 aa20.33■□□□□ 0.85
CTSB-224ENST00000532392 HDGFL2Q7Z4V5 671 aaPredicted RBP20.33■□□□□ 0.85
CTSB-224ENST00000532392 CDCA8Q53HL2 280 aa20.32■□□□□ 0.84
CTSB-224ENST00000532392 TERF2IPQ9NYB0 399 aa20.32■□□□□ 0.84
CTSB-224ENST00000532392 CRYBG1Q9Y4K1 1723 aa20.32■□□□□ 0.84
CTSB-224ENST00000532392 NINLQ9Y2I6 1382 aa20.32■□□□□ 0.84
CTSB-224ENST00000532392 CD163L1Q9NR16 1453 aa20.31■□□□□ 0.84
CTSB-224ENST00000532392 TTC21AQ8NDW8 1320 aa20.31■□□□□ 0.84
CTSB-224ENST00000532392 ZC3H6P61129 1189 aaKnown RBP20.31■□□□□ 0.84
CTSB-224ENST00000532392 EIF4G2P78344 907 aaKnown RBP eCLIP20.31■□□□□ 0.84
CTSB-224ENST00000532392 PRDM11Q9NQV5 511 aa20.31■□□□□ 0.84
CTSB-224ENST00000532392 AKAP12Q02952 1782 aa20.31■□□□□ 0.84
CTSB-224ENST00000532392 CDK12Q9NYV4 1490 aaPredicted RBP20.3■□□□□ 0.84
CTSB-224ENST00000532392 GCP02774 474 aa20.3■□□□□ 0.84
CTSB-224ENST00000532392 GJD4Q96KN9 370 aaPredicted RBP20.29■□□□□ 0.84
CTSB-224ENST00000532392 BTG4Q9NY30 223 aa20.29■□□□□ 0.84
CTSB-224ENST00000532392 KIAA0232Q92628 1395 aa20.29■□□□□ 0.84
CTSB-224ENST00000532392 PHRF1Q9P1Y6 1649 aaKnown RBP20.28■□□□□ 0.84
CTSB-224ENST00000532392 A0A1W2PP64 1363 aa20.27■□□□□ 0.84
CTSB-224ENST00000532392 HSPA5P11021 654 aaKnown RBP20.27■□□□□ 0.84
CTSB-224ENST00000532392 VPS72Q15906 364 aa20.27■□□□□ 0.84
CTSB-224ENST00000532392 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.27■□□□□ 0.84
CTSB-224ENST00000532392 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.27■□□□□ 0.83
CTSB-224ENST00000532392 COL14A1Q05707 1796 aaKnown RBP20.26■□□□□ 0.83
CTSB-224ENST00000532392 CHRNA2Q15822 529 aa20.26■□□□□ 0.83
CTSB-224ENST00000532392 NWD2Q9ULI1 1742 aa20.26■□□□□ 0.83
CTSB-224ENST00000532392 EDC4Q6P2E9 1401 aaKnown RBP20.26■□□□□ 0.83
CTSB-224ENST00000532392 PIK3C2AO00443 1686 aa20.26■□□□□ 0.83
CTSB-224ENST00000532392 PLCH1Q4KWH8 1693 aa20.26■□□□□ 0.83
CTSB-224ENST00000532392 MON2Q7Z3U7 1717 aa20.25■□□□□ 0.83
CTSB-224ENST00000532392 CPDO75976 1380 aa20.25■□□□□ 0.83
CTSB-224ENST00000532392 NRKQ7Z2Y5 1582 aa20.25■□□□□ 0.83
CTSB-224ENST00000532392 CCDC9Q9Y3X0 531 aaKnown RBP20.24■□□□□ 0.83
CTSB-224ENST00000532392 RGS12O14924 1447 aa20.24■□□□□ 0.83
CTSB-224ENST00000532392 NME9Q86XW9 330 aa20.23■□□□□ 0.83
CTSB-224ENST00000532392 KCNH5Q8NCM2 988 aa20.23■□□□□ 0.83
CTSB-224ENST00000532392 SLIT3O75094 1523 aa20.22■□□□□ 0.83
CTSB-224ENST00000532392 ANKRD36BQ8N2N9 1353 aa20.22■□□□□ 0.83
CTSB-224ENST00000532392 ZRANB1Q9UGI0 708 aa20.22■□□□□ 0.83
CTSB-224ENST00000532392 USP31Q70CQ4 1352 aa20.21■□□□□ 0.83
CTSB-224ENST00000532392 GLI3P10071 1580 aa20.19■□□□□ 0.82
CTSB-224ENST00000532392 NRAPQ86VF7 1730 aa20.19■□□□□ 0.82
CTSB-224ENST00000532392 ZBTB7CA1YPR0 619 aa20.18■□□□□ 0.82
CTSB-224ENST00000532392 SOX12O15370 315 aa20.18■□□□□ 0.82
CTSB-224ENST00000532392 EVA1CP58658 441 aa20.18■□□□□ 0.82
CTSB-224ENST00000532392 STRN4Q9NRL3 753 aa20.18■□□□□ 0.82
CTSB-224ENST00000532392 ONECUT3O60422 494 aaPredicted RBP20.17■□□□□ 0.82
CTSB-224ENST00000532392 ARHGEF25Q86VW2 580 aa20.17■□□□□ 0.82
CTSB-224ENST00000532392 SPATA31A5Q5VU36 1347 aa20.17■□□□□ 0.82
CTSB-224ENST00000532392 SPATA31A7Q8IWB4 1347 aa20.17■□□□□ 0.82
CTSB-224ENST00000532392 AATKQ6ZMQ8 1374 aa20.17■□□□□ 0.82
CTSB-224ENST00000532392 CAMTA1Q9Y6Y1 1673 aa20.16■□□□□ 0.82
CTSB-224ENST00000532392 POLR3GLQ9BT43 218 aa20.15■□□□□ 0.82
CTSB-224ENST00000532392 LMO7Q8WWI1 1683 aa20.14■□□□□ 0.81
CTSB-224ENST00000532392 SEPT12Q8IYM1 358 aa20.14■□□□□ 0.81
CTSB-224ENST00000532392 OVOS2A0A0J9YW53 1432 aa20.13■□□□□ 0.81
CTSB-224ENST00000532392 OVOS2Q6IE36 1432 aa20.13■□□□□ 0.81
CTSB-224ENST00000532392 SPATA31A1Q5TZJ5 1347 aa20.13■□□□□ 0.81
CTSB-224ENST00000532392 FAM98CQ17RN3 349 aaKnown RBP20.13■□□□□ 0.81
CTSB-224ENST00000532392 COG3Q96JB2 828 aa20.13■□□□□ 0.81
CTSB-224ENST00000532392 USP54Q70EL1 1684 aa20.13■□□□□ 0.81
CTSB-224ENST00000532392 NFAT5O94916 1531 aa20.12■□□□□ 0.81
CTSB-224ENST00000532392 FYB1O15117 783 aa20.12■□□□□ 0.81
CTSB-224ENST00000532392 LARP1Q6PKG0 1096 aaKnown RBP20.12■□□□□ 0.81
CTSB-224ENST00000532392 CARD14Q9BXL6 1004 aa20.12■□□□□ 0.81
CTSB-224ENST00000532392 AXIN2Q9Y2T1 843 aa20.12■□□□□ 0.81
CTSB-224ENST00000532392 C11orf95C9JLR9 678 aaPredicted RBP20.11■□□□□ 0.81
CTSB-224ENST00000532392 UPF1Q92900 1129 aaKnown RBP eCLIP20.11■□□□□ 0.81
CTSB-224ENST00000532392 COL5A2P05997 1499 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms