RNA–Protein interactions for RNA: ENST00000532330.5

BRPF3-209, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-209ENST00000532330 CEP170BQ9Y4F5 1589 aaPredicted RBP14.29□□□□□ -0.12
BRPF3-209ENST00000532330 CHMP4BQ9H444 224 aaKnown RBP14.29□□□□□ -0.12
BRPF3-209ENST00000532330 CD163L1Q9NR16 1453 aa14.29□□□□□ -0.12
BRPF3-209ENST00000532330 ITSN1Q15811 1721 aa14.29□□□□□ -0.12
BRPF3-209ENST00000532330 TNNT2P45379 298 aaPredicted RBP14.28□□□□□ -0.12
BRPF3-209ENST00000532330 ZNF428Q96B54 188 aa14.28□□□□□ -0.12
BRPF3-209ENST00000532330 GGNBP2Q9H3C7 697 aa14.28□□□□□ -0.12
BRPF3-209ENST00000532330 PLEKHH1Q9ULM0 1364 aa14.28□□□□□ -0.12
BRPF3-209ENST00000532330 IRX6P78412 446 aaPredicted RBP14.28□□□□□ -0.12
BRPF3-209ENST00000532330 CDK12Q9NYV4 1490 aaPredicted RBP14.27□□□□□ -0.12
BRPF3-209ENST00000532330 TCP11L2Q8N4U5 519 aa14.27□□□□□ -0.12
BRPF3-209ENST00000532330 WWC1Q8IX03 1113 aa14.27□□□□□ -0.12
BRPF3-209ENST00000532330 CCDC146Q8IYE0 955 aa14.27□□□□□ -0.12
BRPF3-209ENST00000532330 CANXP27824 592 aaKnown RBP14.27□□□□□ -0.13
BRPF3-209ENST00000532330 PDE3AQ14432 1141 aa14.27□□□□□ -0.13
BRPF3-209ENST00000532330 U2SURPO15042 1029 aaKnown RBP14.26□□□□□ -0.13
BRPF3-209ENST00000532330 AMOTL2Q9Y2J4 779 aa14.26□□□□□ -0.13
BRPF3-209ENST00000532330 ZNF142P52746 1687 aaPredicted RBP14.26□□□□□ -0.13
BRPF3-209ENST00000532330 SHPRHQ149N8 1683 aa14.26□□□□□ -0.13
BRPF3-209ENST00000532330 IQSEC2Q5JU85 1478 aa14.26□□□□□ -0.13
BRPF3-209ENST00000532330 MON2Q7Z3U7 1717 aa14.25□□□□□ -0.13
BRPF3-209ENST00000532330 CDCA7LQ96GN5 454 aa14.25□□□□□ -0.13
BRPF3-209ENST00000532330 TSHZ2Q9NRE2 1034 aa14.25□□□□□ -0.13
BRPF3-209ENST00000532330 TCERG1O14776 1098 aaKnown RBP14.24□□□□□ -0.13
BRPF3-209ENST00000532330 LTKP29376 864 aa14.24□□□□□ -0.13
BRPF3-209ENST00000532330 PHF23Q9BUL5 403 aaPredicted RBP14.24□□□□□ -0.13
BRPF3-209ENST00000532330 KIF24Q5T7B8 1368 aa14.24□□□□□ -0.13
BRPF3-209ENST00000532330 ROBO2Q9HCK4 1378 aa14.24□□□□□ -0.13
BRPF3-209ENST00000532330 TTC21BQ7Z4L5 1316 aa14.23□□□□□ -0.13
BRPF3-209ENST00000532330 AKAP12Q02952 1782 aa14.23□□□□□ -0.13
BRPF3-209ENST00000532330 RIMS1Q86UR5 1692 aaKnown RBP14.23□□□□□ -0.13
BRPF3-209ENST00000532330 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.22□□□□□ -0.13
BRPF3-209ENST00000532330 COL3A1P02461 1466 aaPredicted RBP14.22□□□□□ -0.13
BRPF3-209ENST00000532330 CEBPAP49715 358 aaPredicted RBP14.22□□□□□ -0.13
BRPF3-209ENST00000532330 B4GALNT3Q6L9W6 998 aa14.22□□□□□ -0.13
BRPF3-209ENST00000532330 LRRC7Q96NW7 1537 aa14.21□□□□□ -0.13
BRPF3-209ENST00000532330 SETD1BQ9UPS6 1966 aaKnown RBP14.21□□□□□ -0.13
BRPF3-209ENST00000532330 IPO8O15397 1037 aaKnown RBP14.21□□□□□ -0.13
BRPF3-209ENST00000532330 CENPQQ7L2Z9 268 aaPredicted RBP14.2□□□□□ -0.14
BRPF3-209ENST00000532330 ADAMTSL3P82987 1691 aa14.2□□□□□ -0.14
BRPF3-209ENST00000532330 TOPAZ1Q8N9V7 1692 aa14.2□□□□□ -0.14
BRPF3-209ENST00000532330 NGDNQ8NEJ9 315 aaKnown RBP14.2□□□□□ -0.14
BRPF3-209ENST00000532330 XRN1Q8IZH2 1706 aaKnown RBP14.2□□□□□ -0.14
BRPF3-209ENST00000532330 USP6P35125 1406 aa14.2□□□□□ -0.14
BRPF3-209ENST00000532330 TMPOP42166 694 aaKnown RBP14.2□□□□□ -0.14
BRPF3-209ENST00000532330 MYT1Q01538 1121 aa14.19□□□□□ -0.14
BRPF3-209ENST00000532330 USP31Q70CQ4 1352 aa14.19□□□□□ -0.14
BRPF3-209ENST00000532330 DNAJC5Q9H3Z4 198 aa14.19□□□□□ -0.14
BRPF3-209ENST00000532330 POLKQ9UBT6 870 aa14.19□□□□□ -0.14
BRPF3-209ENST00000532330 SLC26A8Q96RN1 970 aa14.18□□□□□ -0.14
BRPF3-209ENST00000532330 ACEP12821 1306 aa14.18□□□□□ -0.14
BRPF3-209ENST00000532330 GNAI1P63096 354 aa14.17□□□□□ -0.14
BRPF3-209ENST00000532330 NFE2L2Q16236 605 aa14.17□□□□□ -0.14
BRPF3-209ENST00000532330 CHMP4AQ9BY43 222 aa14.17□□□□□ -0.14
BRPF3-209ENST00000532330 EXOC6Q8TAG9 804 aa14.17□□□□□ -0.14
BRPF3-209ENST00000532330 PMFBP1Q8TBY8 1022 aa14.16□□□□□ -0.14
BRPF3-209ENST00000532330 SENP3Q9H4L4 574 aaPredicted RBP14.16□□□□□ -0.14
BRPF3-209ENST00000532330 RIPK4P57078 832 aa14.16□□□□□ -0.14
BRPF3-209ENST00000532330 PLEKHF1Q96S99 279 aa14.16□□□□□ -0.14
BRPF3-209ENST00000532330 KIF16BQ96L93 1317 aa14.16□□□□□ -0.14
BRPF3-209ENST00000532330 PTPRUQ92729 1446 aa14.15□□□□□ -0.14
BRPF3-209ENST00000532330 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
BRPF3-209ENST00000532330 ALDH1L2Q3SY69 923 aa14.15□□□□□ -0.14
BRPF3-209ENST00000532330 CRBNQ96SW2 442 aa14.15□□□□□ -0.14
BRPF3-209ENST00000532330 PPM1GO15355 546 aaPredicted RBP14.15□□□□□ -0.14
BRPF3-209ENST00000532330 NEUROD2Q15784 382 aa14.15□□□□□ -0.14
BRPF3-209ENST00000532330 NME9Q86XW9 330 aa14.14□□□□□ -0.15
BRPF3-209ENST00000532330 FANCIQ9NVI1 1328 aa14.14□□□□□ -0.15
BRPF3-209ENST00000532330 OVOS2A0A0J9YW53 1432 aa14.14□□□□□ -0.15
BRPF3-209ENST00000532330 OVOS2Q6IE36 1432 aa14.14□□□□□ -0.15
BRPF3-209ENST00000532330 ZKSCAN2Q63HK3 967 aa14.13□□□□□ -0.15
BRPF3-209ENST00000532330 IFT57Q9NWB7 429 aa14.13□□□□□ -0.15
BRPF3-209ENST00000532330 PRR36Q9H6K5 1346 aa14.13□□□□□ -0.15
BRPF3-209ENST00000532330 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.13□□□□□ -0.15
BRPF3-209ENST00000532330 KCNA6P17658 529 aa14.13□□□□□ -0.15
BRPF3-209ENST00000532330 IL13P35225 146 aa14.13□□□□□ -0.15
BRPF3-209ENST00000532330 RSPH6AQ9H0K4 717 aa14.12□□□□□ -0.15
BRPF3-209ENST00000532330 SBNO1A3KN83 1393 aa14.12□□□□□ -0.15
BRPF3-209ENST00000532330 ARHGEF10O15013 1369 aa14.12□□□□□ -0.15
BRPF3-209ENST00000532330 NCOA3Q9Y6Q9 1424 aa14.12□□□□□ -0.15
BRPF3-209ENST00000532330 NRKQ7Z2Y5 1582 aa14.12□□□□□ -0.15
BRPF3-209ENST00000532330 RTL1A6NKG5 1358 aa14.12□□□□□ -0.15
BRPF3-209ENST00000532330 PRKAR2BP31323 418 aa14.12□□□□□ -0.15
BRPF3-209ENST00000532330 FLT4P35916 1363 aa14.12□□□□□ -0.15
BRPF3-209ENST00000532330 RBM19Q9Y4C8 960 aaKnown RBP14.12□□□□□ -0.15
BRPF3-209ENST00000532330 ADGRL3Q9HAR2 1447 aa14.11□□□□□ -0.15
BRPF3-209ENST00000532330 RARSP54136 660 aaKnown RBP14.11□□□□□ -0.15
BRPF3-209ENST00000532330 FTSJ3Q8IY81 847 aaKnown RBP14.1□□□□□ -0.15
BRPF3-209ENST00000532330 KCNH5Q8NCM2 988 aa14.1□□□□□ -0.15
BRPF3-209ENST00000532330 FMN2Q9NZ56 1722 aa14.1□□□□□ -0.15
BRPF3-209ENST00000532330 ANP32AP39687 249 aaKnown RBP14.1□□□□□ -0.15
BRPF3-209ENST00000532330 HTATSF1O43719 755 aaKnown RBP14.1□□□□□ -0.15
BRPF3-209ENST00000532330 EIF5BO60841 1220 aaKnown RBP14.1□□□□□ -0.15
BRPF3-209ENST00000532330 RRP7AQ9Y3A4 280 aaKnown RBP14.1□□□□□ -0.15
BRPF3-209ENST00000532330 SSH2Q76I76 1423 aa14.1□□□□□ -0.15
BRPF3-209ENST00000532330 AMPHP49418 695 aa14.09□□□□□ -0.15
BRPF3-209ENST00000532330 BRPF1P55201 1214 aaPredicted RBP14.09□□□□□ -0.15
BRPF3-209ENST00000532330 GAS2L2Q8NHY3 880 aa14.09□□□□□ -0.15
BRPF3-209ENST00000532330 RWDD1Q9H446 243 aaPredicted RBP14.09□□□□□ -0.15
BRPF3-209ENST00000532330 SOS1Q07889 1333 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms