RNA–Protein interactions for RNA: ENST00000532056.5

KNL1-208, Transcript of kinetochore scaffold 1, human

TSL 3

Gene KNL1, Length 259 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNL1-208	ENST00000532056	ZNF692	Q9BU19	519 aa	Predicted RBP	14.02	□□□□□ -0.17
KNL1-208	ENST00000532056	ABCA3	Q99758	1704 aa		14.01	□□□□□ -0.17
KNL1-208	ENST00000532056	LRP6	O75581	1613 aa		14.01	□□□□□ -0.17
KNL1-208	ENST00000532056	KTN1	Q86UP2	1357 aa	Known RBP	14.01	□□□□□ -0.17
KNL1-208	ENST00000532056	SLC12A5	Q9H2X9	1139 aa		14.01	□□□□□ -0.17
KNL1-208	ENST00000532056		A0A1W2PP64	1363 aa		14	□□□□□ -0.17
KNL1-208	ENST00000532056	PAK3	O75914	559 aa	Predicted RBP	14	□□□□□ -0.17
KNL1-208	ENST00000532056	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	14	□□□□□ -0.17
KNL1-208	ENST00000532056	TERF2IP	Q9NYB0	399 aa		14	□□□□□ -0.17
KNL1-208	ENST00000532056	CRYBG1	Q9Y4K1	1723 aa		14	□□□□□ -0.17
KNL1-208	ENST00000532056	ANKRD36B	Q8N2N9	1353 aa		13.99	□□□□□ -0.17
KNL1-208	ENST00000532056	LMOD2	Q6P5Q4	547 aa		13.99	□□□□□ -0.17
KNL1-208	ENST00000532056	PIK3C2A	O00443	1686 aa		13.98	□□□□□ -0.17
KNL1-208	ENST00000532056	EDC4	Q6P2E9	1401 aa	Known RBP	13.98	□□□□□ -0.17
KNL1-208	ENST00000532056	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.97	□□□□□ -0.17
KNL1-208	ENST00000532056	TTC21B	Q7Z4L5	1316 aa		13.97	□□□□□ -0.17
KNL1-208	ENST00000532056	TTC21A	Q8NDW8	1320 aa		13.97	□□□□□ -0.17
KNL1-208	ENST00000532056	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.97	□□□□□ -0.17
KNL1-208	ENST00000532056	NUTM2E	B1AL46	878 aa	Predicted RBP	13.97	□□□□□ -0.17
KNL1-208	ENST00000532056	C11orf95	C9JLR9	678 aa	Predicted RBP	13.97	□□□□□ -0.17
KNL1-208	ENST00000532056	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.97	□□□□□ -0.17
KNL1-208	ENST00000532056	MARF1	Q9Y4F3	1742 aa	Known RBP	13.97	□□□□□ -0.17
KNL1-208	ENST00000532056	USP54	Q70EL1	1684 aa		13.96	□□□□□ -0.17
KNL1-208	ENST00000532056	ABTB2	Q8N961	1025 aa		13.96	□□□□□ -0.17
KNL1-208	ENST00000532056	POLR3GL	Q9BT43	218 aa		13.96	□□□□□ -0.17
KNL1-208	ENST00000532056	KIF7	Q2M1P5	1343 aa		13.95	□□□□□ -0.18
KNL1-208	ENST00000532056	USP19	O94966	1318 aa		13.94	□□□□□ -0.18
KNL1-208	ENST00000532056	SLIT3	O75094	1523 aa		13.94	□□□□□ -0.18
KNL1-208	ENST00000532056	MEX3C	Q5U5Q3	659 aa	Known RBP	13.93	□□□□□ -0.18
KNL1-208	ENST00000532056	NUTM2G	Q5VZR2	741 aa		13.93	□□□□□ -0.18
KNL1-208	ENST00000532056	NLRP13	Q86W25	1043 aa		13.93	□□□□□ -0.18
KNL1-208	ENST00000532056	CABLES1	Q8TDN4	633 aa		13.93	□□□□□ -0.18
KNL1-208	ENST00000532056	CCDC7	Q96M83	1385 aa		13.93	□□□□□ -0.18
KNL1-208	ENST00000532056	ADAMTS2	O95450	1211 aa		13.92	□□□□□ -0.18
KNL1-208	ENST00000532056	HAP1	P54257	671 aa	Predicted RBP	13.92	□□□□□ -0.18
KNL1-208	ENST00000532056	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
KNL1-208	ENST00000532056	USP31	Q70CQ4	1352 aa		13.92	□□□□□ -0.18
KNL1-208	ENST00000532056	PLEKHG5	O94827	1062 aa		13.91	□□□□□ -0.18
KNL1-208	ENST00000532056	NLRP6	P59044	892 aa		13.91	□□□□□ -0.18
KNL1-208	ENST00000532056	KIF20B	Q96Q89	1820 aa		13.91	□□□□□ -0.18
KNL1-208	ENST00000532056	WASHC2A	Q641Q2	1341 aa		13.9	□□□□□ -0.18
KNL1-208	ENST00000532056	NSD3	Q9BZ95	1437 aa		13.9	□□□□□ -0.18
KNL1-208	ENST00000532056	NME9	Q86XW9	330 aa		13.9	□□□□□ -0.18
KNL1-208	ENST00000532056	PHF23	Q9BUL5	403 aa	Predicted RBP	13.9	□□□□□ -0.18
KNL1-208	ENST00000532056	OVOS2	A0A0J9YW53	1432 aa		13.9	□□□□□ -0.19
KNL1-208	ENST00000532056	OVOS2	Q6IE36	1432 aa		13.9	□□□□□ -0.19
KNL1-208	ENST00000532056	COL14A1	Q05707	1796 aa	Known RBP	13.89	□□□□□ -0.19
KNL1-208	ENST00000532056	PLCH1	Q4KWH8	1693 aa		13.89	□□□□□ -0.19
KNL1-208	ENST00000532056	C8orf37	Q96NL8	207 aa		13.89	□□□□□ -0.19
KNL1-208	ENST00000532056	CARD14	Q9BXL6	1004 aa		13.89	□□□□□ -0.19
KNL1-208	ENST00000532056	PANK3	Q9H999	370 aa		13.88	□□□□□ -0.19
KNL1-208	ENST00000532056	NWD2	Q9ULI1	1742 aa		13.87	□□□□□ -0.19
KNL1-208	ENST00000532056	CPD	O75976	1380 aa		13.87	□□□□□ -0.19
KNL1-208	ENST00000532056	SLIT2	O94813	1529 aa		13.87	□□□□□ -0.19
KNL1-208	ENST00000532056	NFAT5	O94916	1531 aa		13.87	□□□□□ -0.19
KNL1-208	ENST00000532056	GC	P02774	474 aa		13.87	□□□□□ -0.19
KNL1-208	ENST00000532056	NGLY1	Q96IV0	654 aa		13.87	□□□□□ -0.19
KNL1-208	ENST00000532056	ZRANB1	Q9UGI0	708 aa		13.87	□□□□□ -0.19
KNL1-208	ENST00000532056	AFF2	P51816	1311 aa		13.87	□□□□□ -0.19
KNL1-208	ENST00000532056	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.87	□□□□□ -0.19
KNL1-208	ENST00000532056	KIAA0232	Q92628	1395 aa		13.86	□□□□□ -0.19
KNL1-208	ENST00000532056	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.86	□□□□□ -0.19
KNL1-208	ENST00000532056	KCNH5	Q8NCM2	988 aa		13.86	□□□□□ -0.19
KNL1-208	ENST00000532056	ANKRD26	Q9UPS8	1709 aa		13.85	□□□□□ -0.19
KNL1-208	ENST00000532056	FYB1	O15117	783 aa		13.85	□□□□□ -0.19
KNL1-208	ENST00000532056	ZNF772	Q68DY9	489 aa	Predicted RBP	13.85	□□□□□ -0.19
KNL1-208	ENST00000532056	COG3	Q96JB2	828 aa		13.85	□□□□□ -0.19
KNL1-208	ENST00000532056	RGS17	Q9UGC6	210 aa	Predicted RBP	13.85	□□□□□ -0.19
KNL1-208	ENST00000532056	CGNL1	Q0VF96	1302 aa		13.85	□□□□□ -0.19
KNL1-208	ENST00000532056	NRAP	Q86VF7	1730 aa		13.84	□□□□□ -0.19
KNL1-208	ENST00000532056	ZC3H6	P61129	1189 aa	Known RBP	13.84	□□□□□ -0.19
KNL1-208	ENST00000532056	PRDM11	Q9NQV5	511 aa		13.84	□□□□□ -0.19
KNL1-208	ENST00000532056	BCL9L	Q86UU0	1499 aa		13.84	□□□□□ -0.19
KNL1-208	ENST00000532056	LMO7	Q8WWI1	1683 aa		13.84	□□□□□ -0.19
KNL1-208	ENST00000532056	FAM83G	A6ND36	823 aa		13.83	□□□□□ -0.2
KNL1-208	ENST00000532056	GGNBP2	Q9H3C7	697 aa		13.83	□□□□□ -0.2
KNL1-208	ENST00000532056	ABCC6	O95255	1503 aa		13.83	□□□□□ -0.2
KNL1-208	ENST00000532056	NSD2	O96028	1365 aa		13.83	□□□□□ -0.2
KNL1-208	ENST00000532056	LTN1	O94822	1766 aa		13.82	□□□□□ -0.2
KNL1-208	ENST00000532056	USP21	Q9UK80	565 aa		13.82	□□□□□ -0.2
KNL1-208	ENST00000532056	COL18A1	P39060	1754 aa		13.81	□□□□□ -0.2
KNL1-208	ENST00000532056	SOX12	O15370	315 aa		13.81	□□□□□ -0.2
KNL1-208	ENST00000532056	ARHGEF25	Q86VW2	580 aa		13.81	□□□□□ -0.2
KNL1-208	ENST00000532056	UNC5CL	Q8IV45	518 aa		13.81	□□□□□ -0.2
KNL1-208	ENST00000532056	KNSTRN	Q9Y448	316 aa		13.81	□□□□□ -0.2
KNL1-208	ENST00000532056	AATK	Q6ZMQ8	1374 aa		13.81	□□□□□ -0.2
KNL1-208	ENST00000532056	ATRN	O75882	1429 aa		13.81	□□□□□ -0.2
KNL1-208	ENST00000532056	CHRNA2	Q15822	529 aa		13.8	□□□□□ -0.2
KNL1-208	ENST00000532056	BTG4	Q9NY30	223 aa		13.8	□□□□□ -0.2
KNL1-208	ENST00000532056	CAMTA1	Q9Y6Y1	1673 aa		13.79	□□□□□ -0.2
KNL1-208	ENST00000532056	PER1	O15534	1290 aa	Predicted RBP	13.79	□□□□□ -0.2
KNL1-208	ENST00000532056	POTEA	Q6S8J7	498 aa		13.79	□□□□□ -0.2
KNL1-208	ENST00000532056	ZBTB7C	A1YPR0	619 aa		13.78	□□□□□ -0.2
KNL1-208	ENST00000532056	TRPC5	Q9UL62	973 aa	Predicted RBP	13.78	□□□□□ -0.2
KNL1-208	ENST00000532056	COL5A2	P05997	1499 aa	Predicted RBP	13.77	□□□□□ -0.21
KNL1-208	ENST00000532056	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.77	□□□□□ -0.21
KNL1-208	ENST00000532056	QTRT2	Q9H974	415 aa	Known RBP	13.77	□□□□□ -0.21
KNL1-208	ENST00000532056	RTL1	A6NKG5	1358 aa		13.76	□□□□□ -0.21
KNL1-208	ENST00000532056	NPC1L1	Q9UHC9	1359 aa		13.76	□□□□□ -0.21
KNL1-208	ENST00000532056	VPS72	Q15906	364 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms