RNA–Protein interactions for RNA: ENST00000531951.5

PUF60-217, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 973 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-217ENST00000531951 USP54Q70EL1 1684 aa25.89■■□□□ 1.73
PUF60-217ENST00000531951 PSME1Q06323 249 aa25.88■■□□□ 1.73
PUF60-217ENST00000531951 KNSTRNQ9Y448 316 aa25.88■■□□□ 1.73
PUF60-217ENST00000531951 MARF1Q9Y4F3 1742 aaKnown RBP25.88■■□□□ 1.73
PUF60-217ENST00000531951 PIP4K2BP78356 416 aa25.85■■□□□ 1.73
PUF60-217ENST00000531951 KRT28Q7Z3Y7 464 aa25.85■■□□□ 1.73
PUF60-217ENST00000531951 DDX17Q92841 729 aaKnown RBP25.85■■□□□ 1.73
PUF60-217ENST00000531951 TTC21BQ7Z4L5 1316 aa25.85■■□□□ 1.73
PUF60-217ENST00000531951 CGNL1Q0VF96 1302 aa25.84■■□□□ 1.73
PUF60-217ENST00000531951 TTC21AQ8NDW8 1320 aa25.84■■□□□ 1.73
PUF60-217ENST00000531951 NPC1L1Q9UHC9 1359 aa25.83■■□□□ 1.73
PUF60-217ENST00000531951 XPCQ01831 940 aaPredicted RBP25.83■■□□□ 1.73
PUF60-217ENST00000531951 AMER1Q5JTC6 1135 aaPredicted RBP25.83■■□□□ 1.73
PUF60-217ENST00000531951 COL16A1Q07092 1604 aaPredicted RBP25.83■■□□□ 1.73
PUF60-217ENST00000531951 SBNO1A3KN83 1393 aa25.82■■□□□ 1.72
PUF60-217ENST00000531951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.82■■□□□ 1.72
PUF60-217ENST00000531951 SOS2Q07890 1332 aaPredicted RBP25.82■■□□□ 1.72
PUF60-217ENST00000531951 NSD2O96028 1365 aa25.82■■□□□ 1.72
PUF60-217ENST00000531951 SCAF1Q9H7N4 1312 aaKnown RBP25.81■■□□□ 1.72
PUF60-217ENST00000531951 DIEXFQ68CQ4 756 aaKnown RBP25.8■■□□□ 1.72
PUF60-217ENST00000531951 TNS3Q68CZ2 1445 aa25.8■■□□□ 1.72
PUF60-217ENST00000531951 CRYBG1Q9Y4K1 1723 aa25.78■■□□□ 1.72
PUF60-217ENST00000531951 PAK3O75914 559 aaPredicted RBP25.78■■□□□ 1.72
PUF60-217ENST00000531951 FYB1O15117 783 aa25.77■■□□□ 1.72
PUF60-217ENST00000531951 NME9Q86XW9 330 aa25.77■■□□□ 1.72
PUF60-217ENST00000531951 OVOS2A0A0J9YW53 1432 aa25.76■■□□□ 1.71
PUF60-217ENST00000531951 OVOS2Q6IE36 1432 aa25.76■■□□□ 1.71
PUF60-217ENST00000531951 ABCA3Q99758 1704 aa25.75■■□□□ 1.71
PUF60-217ENST00000531951 USP31Q70CQ4 1352 aa25.75■■□□□ 1.71
PUF60-217ENST00000531951 SPATA31A3Q5VYP0 1347 aa25.75■■□□□ 1.71
PUF60-217ENST00000531951 PHRF1Q9P1Y6 1649 aaKnown RBP25.74■■□□□ 1.71
PUF60-217ENST00000531951 MED1Q15648 1581 aaPredicted RBP25.74■■□□□ 1.71
PUF60-217ENST00000531951 MAP2P11137 1827 aaKnown RBP25.74■■□□□ 1.71
PUF60-217ENST00000531951 CC2D1BQ5T0F9 858 aaKnown RBP25.73■■□□□ 1.71
PUF60-217ENST00000531951 ABTB2Q8N961 1025 aa25.73■■□□□ 1.71
PUF60-217ENST00000531951 GGNBP2Q9H3C7 697 aa25.73■■□□□ 1.71
PUF60-217ENST00000531951 COL22A1Q8NFW1 1626 aaPredicted RBP25.73■■□□□ 1.71
PUF60-217ENST00000531951 ARHGEF10O15013 1369 aa25.72■■□□□ 1.71
PUF60-217ENST00000531951 ZRANB1Q9UGI0 708 aa25.71■■□□□ 1.71
PUF60-217ENST00000531951 SHPRHQ149N8 1683 aa25.71■■□□□ 1.71
PUF60-217ENST00000531951 PARD3Q8TEW0 1356 aa25.7■■□□□ 1.71
PUF60-217ENST00000531951 SLIT3O75094 1523 aa25.69■■□□□ 1.7
PUF60-217ENST00000531951 COG3Q96JB2 828 aa25.69■■□□□ 1.7
PUF60-217ENST00000531951 NLRP6P59044 892 aa25.68■■□□□ 1.7
PUF60-217ENST00000531951 CNGB1Q14028 1251 aaPredicted RBP25.68■■□□□ 1.7
PUF60-217ENST00000531951 LRRC59Q96AG4 307 aaKnown RBP25.68■■□□□ 1.7
PUF60-217ENST00000531951 LTN1O94822 1766 aa25.68■■□□□ 1.7
PUF60-217ENST00000531951 ANP32CO43423 234 aa25.67■■□□□ 1.7
PUF60-217ENST00000531951 LMOD2Q6P5Q4 547 aa25.67■■□□□ 1.7
PUF60-217ENST00000531951 PRKRIP1Q9H875 184 aaPredicted RBP25.67■■□□□ 1.7
PUF60-217ENST00000531951 NUTM2GQ5VZR2 741 aa25.66■■□□□ 1.7
PUF60-217ENST00000531951 MORC1Q86VD1 984 aa25.66■■□□□ 1.7
PUF60-217ENST00000531951 NLRP13Q86W25 1043 aa25.66■■□□□ 1.7
PUF60-217ENST00000531951 USP19O94966 1318 aa25.65■■□□□ 1.7
PUF60-217ENST00000531951 RALBP1Q15311 655 aa25.65■■□□□ 1.7
PUF60-217ENST00000531951 NFAT5O94916 1531 aa25.63■■□□□ 1.69
PUF60-217ENST00000531951 PNPLA6Q8IY17 1366 aa25.63■■□□□ 1.69
PUF60-217ENST00000531951 AATKQ6ZMQ8 1374 aa25.59■■□□□ 1.69
PUF60-217ENST00000531951 HSPA1LP34931 641 aa25.58■■□□□ 1.69
PUF60-217ENST00000531951 TNNT2P45379 298 aaPredicted RBP25.57■■□□□ 1.68
PUF60-217ENST00000531951 KCNH5Q8NCM2 988 aa25.57■■□□□ 1.68
PUF60-217ENST00000531951 MYBBP1AQ9BQG0 1328 aaKnown RBP25.57■■□□□ 1.68
PUF60-217ENST00000531951 FBXO41Q8TF61 875 aa25.56■■□□□ 1.68
PUF60-217ENST00000531951 PEAK1Q9H792 1746 aa25.56■■□□□ 1.68
PUF60-217ENST00000531951 JCADQ9P266 1359 aa25.56■■□□□ 1.68
PUF60-217ENST00000531951 PPP2R1AP30153 589 aa25.55■■□□□ 1.68
PUF60-217ENST00000531951 SMG6Q86US8 1419 aaKnown RBP25.54■■□□□ 1.68
PUF60-217ENST00000531951 RGPD5Q99666 1765 aa25.54■■□□□ 1.68
PUF60-217ENST00000531951 GCP02774 474 aa25.54■■□□□ 1.68
PUF60-217ENST00000531951 CABLES1Q8TDN4 633 aa25.54■■□□□ 1.68
PUF60-217ENST00000531951 PLEKHG5O94827 1062 aa25.53■■□□□ 1.68
PUF60-217ENST00000531951 COL18A1P39060 1754 aa25.52■■□□□ 1.68
PUF60-217ENST00000531951 SOX12O15370 315 aa25.52■■□□□ 1.68
PUF60-217ENST00000531951 FBLN1P23142 703 aa25.51■■□□□ 1.67
PUF60-217ENST00000531951 MIER1Q8N108 512 aa25.51■■□□□ 1.67
PUF60-217ENST00000531951 ABCC6O95255 1503 aa25.49■■□□□ 1.67
PUF60-217ENST00000531951 CDK12Q9NYV4 1490 aaPredicted RBP25.49■■□□□ 1.67
PUF60-217ENST00000531951 POLKQ9UBT6 870 aa25.49■■□□□ 1.67
PUF60-217ENST00000531951 CPDO75976 1380 aa25.48■■□□□ 1.67
PUF60-217ENST00000531951 RRS1Q15050 365 aaKnown RBP25.48■■□□□ 1.67
PUF60-217ENST00000531951 MAP3K19Q56UN5 1328 aa25.47■■□□□ 1.67
PUF60-217ENST00000531951 HAP1P54257 671 aaPredicted RBP25.47■■□□□ 1.67
PUF60-217ENST00000531951 EMILIN1Q9Y6C2 1016 aa25.47■■□□□ 1.67
PUF60-217ENST00000531951 COL14A1Q05707 1796 aaKnown RBP25.46■■□□□ 1.67
PUF60-217ENST00000531951 RTL1A6NKG5 1358 aa25.46■■□□□ 1.67
PUF60-217ENST00000531951 KIF24Q5T7B8 1368 aa25.46■■□□□ 1.67
PUF60-217ENST00000531951 LMO7Q8WWI1 1683 aa25.46■■□□□ 1.67
PUF60-217ENST00000531951 MTHFSP49914 203 aa25.45■■□□□ 1.66
PUF60-217ENST00000531951 ARHGEF25Q86VW2 580 aa25.45■■□□□ 1.66
PUF60-217ENST00000531951 PLCH1Q4KWH8 1693 aa25.45■■□□□ 1.66
PUF60-217ENST00000531951 SPATA31A6Q5VVP1 1343 aa25.44■■□□□ 1.66
PUF60-217ENST00000531951 ZC3H6P61129 1189 aaKnown RBP25.44■■□□□ 1.66
PUF60-217ENST00000531951 FLT4P35916 1363 aa25.44■■□□□ 1.66
PUF60-217ENST00000531951 KIAA0232Q92628 1395 aa25.44■■□□□ 1.66
PUF60-217ENST00000531951 COL3A1P02461 1466 aaPredicted RBP25.43■■□□□ 1.66
PUF60-217ENST00000531951 INSRP06213 1382 aa25.42■■□□□ 1.66
PUF60-217ENST00000531951 CCER2I3L3R5 266 aa25.41■■□□□ 1.66
PUF60-217ENST00000531951 PPM1GO15355 546 aaPredicted RBP25.41■■□□□ 1.66
PUF60-217ENST00000531951 AMPHP49418 695 aa25.4■■□□□ 1.66
PUF60-217ENST00000531951 LRP6O75581 1613 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms