RNA–Protein interactions for RNA: ENST00000531744.5

SDHD-212, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-212ENST00000531744 VPS72Q15906 364 aa18.25■□□□□ 0.51
SDHD-212ENST00000531744 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
SDHD-212ENST00000531744 POLR3AO14802 1390 aaPredicted RBP18.24■□□□□ 0.51
SDHD-212ENST00000531744 GPRASP1Q5JY77 1395 aa18.23■□□□□ 0.51
SDHD-212ENST00000531744 L3MBTL2Q969R5 705 aa18.23■□□□□ 0.51
SDHD-212ENST00000531744 NRKQ7Z2Y5 1582 aa18.22■□□□□ 0.51
SDHD-212ENST00000531744 ONECUT3O60422 494 aaPredicted RBP18.22■□□□□ 0.51
SDHD-212ENST00000531744 THSD7AQ9UPZ6 1657 aa18.22■□□□□ 0.51
SDHD-212ENST00000531744 NGDNQ8NEJ9 315 aaKnown RBP18.21■□□□□ 0.51
SDHD-212ENST00000531744 LMO7Q8WWI1 1683 aa18.2■□□□□ 0.5
SDHD-212ENST00000531744 HAP1P54257 671 aaPredicted RBP18.2■□□□□ 0.5
SDHD-212ENST00000531744 ACEP12821 1306 aa18.2■□□□□ 0.5
SDHD-212ENST00000531744 PLEKHG3A1L390 1219 aa18.19■□□□□ 0.5
SDHD-212ENST00000531744 SEPT12Q8IYM1 358 aa18.19■□□□□ 0.5
SDHD-212ENST00000531744 AKAP12Q02952 1782 aa18.19■□□□□ 0.5
SDHD-212ENST00000531744 BTG4Q9NY30 223 aa18.18■□□□□ 0.5
SDHD-212ENST00000531744 PAK3O75914 559 aaPredicted RBP18.17■□□□□ 0.5
SDHD-212ENST00000531744 NBPF8Q3BBV2 869 aa18.17■□□□□ 0.5
SDHD-212ENST00000531744 CCDC61Q9Y6R9 512 aa18.17■□□□□ 0.5
SDHD-212ENST00000531744 NUTM2GQ5VZR2 741 aa18.16■□□□□ 0.5
SDHD-212ENST00000531744 CENPJQ9HC77 1338 aaPredicted RBP18.16■□□□□ 0.5
SDHD-212ENST00000531744 KIAA0232Q92628 1395 aa18.16■□□□□ 0.5
SDHD-212ENST00000531744 PIK3C2AO00443 1686 aa18.15■□□□□ 0.5
SDHD-212ENST00000531744 PPIP5K1Q6PFW1 1433 aa18.15■□□□□ 0.5
SDHD-212ENST00000531744 TNS1Q9HBL0 1735 aaKnown RBP18.15■□□□□ 0.5
SDHD-212ENST00000531744 CABP2Q9NPB3 220 aa18.15■□□□□ 0.5
SDHD-212ENST00000531744 RGPD5Q99666 1765 aa18.14■□□□□ 0.5
SDHD-212ENST00000531744 CAMTA1Q9Y6Y1 1673 aa18.14■□□□□ 0.49
SDHD-212ENST00000531744 SPATA31A5Q5VU36 1347 aa18.14■□□□□ 0.49
SDHD-212ENST00000531744 SPATA31A7Q8IWB4 1347 aa18.14■□□□□ 0.49
SDHD-212ENST00000531744 COL18A1P39060 1754 aa18.14■□□□□ 0.49
SDHD-212ENST00000531744 BLMP54132 1417 aaPredicted RBP18.14■□□□□ 0.49
SDHD-212ENST00000531744 CHRNA2Q15822 529 aa18.13■□□□□ 0.49
SDHD-212ENST00000531744 FAM98CQ17RN3 349 aaKnown RBP18.12■□□□□ 0.49
SDHD-212ENST00000531744 CCDC9Q9Y3X0 531 aaKnown RBP18.12■□□□□ 0.49
SDHD-212ENST00000531744 USP19O94966 1318 aa18.12■□□□□ 0.49
SDHD-212ENST00000531744 SSH2Q76I76 1423 aa18.12■□□□□ 0.49
SDHD-212ENST00000531744 RGPD1P0DJD0 1748 aa18.12■□□□□ 0.49
SDHD-212ENST00000531744 NEUROD1Q13562 356 aa18.11■□□□□ 0.49
SDHD-212ENST00000531744 DEFB132Q7Z7B7 95 aa18.11■□□□□ 0.49
SDHD-212ENST00000531744 ZC3H6P61129 1189 aaKnown RBP18.1■□□□□ 0.49
SDHD-212ENST00000531744 KRT27Q7Z3Y8 459 aa18.1■□□□□ 0.49
SDHD-212ENST00000531744 CCDC125Q86Z20 511 aa18.1■□□□□ 0.49
SDHD-212ENST00000531744 PRDM11Q9NQV5 511 aa18.1■□□□□ 0.49
SDHD-212ENST00000531744 MON2Q7Z3U7 1717 aa18.09■□□□□ 0.49
SDHD-212ENST00000531744 SLIT3O75094 1523 aa18.08■□□□□ 0.49
SDHD-212ENST00000531744 USP6P35125 1406 aa18.08■□□□□ 0.49
SDHD-212ENST00000531744 SPATA31A1Q5TZJ5 1347 aa18.08■□□□□ 0.49
SDHD-212ENST00000531744 WNK3Q9BYP7 1800 aa18.08■□□□□ 0.48
SDHD-212ENST00000531744 SRPK2P78362 688 aaKnown RBP18.08■□□□□ 0.48
SDHD-212ENST00000531744 FAM182BQ5T319 152 aa18.08■□□□□ 0.48
SDHD-212ENST00000531744 CABP1Q9NZU7 370 aa18.07■□□□□ 0.48
SDHD-212ENST00000531744 CPDO75976 1380 aa18.06■□□□□ 0.48
SDHD-212ENST00000531744 ABTB2Q8N961 1025 aa18.06■□□□□ 0.48
SDHD-212ENST00000531744 ROCK2O75116 1388 aaKnown RBP18.05■□□□□ 0.48
SDHD-212ENST00000531744 PARP4Q9UKK3 1724 aaKnown RBP18.05■□□□□ 0.48
SDHD-212ENST00000531744 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
SDHD-212ENST00000531744 USP54Q70EL1 1684 aa18.03■□□□□ 0.48
SDHD-212ENST00000531744 COL5A2P05997 1499 aaPredicted RBP18.02■□□□□ 0.48
SDHD-212ENST00000531744 GCP02774 474 aa18.02■□□□□ 0.48
SDHD-212ENST00000531744 STRN4Q9NRL3 753 aa18.02■□□□□ 0.48
SDHD-212ENST00000531744 PEAK1Q9H792 1746 aa18.01■□□□□ 0.47
SDHD-212ENST00000531744 CPSF1Q10570 1443 aaKnown RBP18.01■□□□□ 0.47
SDHD-212ENST00000531744 LARP1Q6PKG0 1096 aaKnown RBP18.01■□□□□ 0.47
SDHD-212ENST00000531744 BRD4O60885 1362 aaPredicted RBP18.01■□□□□ 0.47
SDHD-212ENST00000531744 CD163L1Q9NR16 1453 aa18.01■□□□□ 0.47
SDHD-212ENST00000531744 EVC2Q86UK5 1308 aa18■□□□□ 0.47
SDHD-212ENST00000531744 A0A0G2JS52 829 aa18■□□□□ 0.47
SDHD-212ENST00000531744 MYT1Q01538 1121 aa18■□□□□ 0.47
SDHD-212ENST00000531744 ZRANB1Q9UGI0 708 aa18■□□□□ 0.47
SDHD-212ENST00000531744 RREB1Q92766 1687 aa17.99■□□□□ 0.47
SDHD-212ENST00000531744 NFAT5O94916 1531 aa17.99■□□□□ 0.47
SDHD-212ENST00000531744 NLRP13Q86W25 1043 aa17.99■□□□□ 0.47
SDHD-212ENST00000531744 LRRC37A3O60309 1634 aa17.98■□□□□ 0.47
SDHD-212ENST00000531744 LTN1O94822 1766 aa17.98■□□□□ 0.47
SDHD-212ENST00000531744 DISP2A7MBM2 1401 aa17.98■□□□□ 0.47
SDHD-212ENST00000531744 SBNO2Q9Y2G9 1366 aa17.97■□□□□ 0.47
SDHD-212ENST00000531744 NUP188Q5SRE5 1749 aa17.97■□□□□ 0.47
SDHD-212ENST00000531744 TTC21BQ7Z4L5 1316 aa17.97■□□□□ 0.47
SDHD-212ENST00000531744 NLRP6P59044 892 aa17.96■□□□□ 0.47
SDHD-212ENST00000531744 BARGINQ6ZT62 677 aa17.96■□□□□ 0.47
SDHD-212ENST00000531744 USP35Q9P2H5 1018 aa17.96■□□□□ 0.47
SDHD-212ENST00000531744 AXIN2Q9Y2T1 843 aa17.96■□□□□ 0.47
SDHD-212ENST00000531744 LRP5O75197 1615 aa17.95■□□□□ 0.46
SDHD-212ENST00000531744 EN1Q05925 392 aaPredicted RBP17.95■□□□□ 0.46
SDHD-212ENST00000531744 AATKQ6ZMQ8 1374 aa17.94■□□□□ 0.46
SDHD-212ENST00000531744 CRB1P82279 1406 aa17.92■□□□□ 0.46
SDHD-212ENST00000531744 EVA1CP58658 441 aa17.92■□□□□ 0.46
SDHD-212ENST00000531744 SF3B2Q13435 895 aaKnown RBP17.92■□□□□ 0.46
SDHD-212ENST00000531744 TCP11L2Q8N4U5 519 aa17.92■□□□□ 0.46
SDHD-212ENST00000531744 TRIM37O94972 964 aa17.91■□□□□ 0.46
SDHD-212ENST00000531744 CARD11Q9BXL7 1154 aa17.91■□□□□ 0.46
SDHD-212ENST00000531744 BAG6P46379 1132 aa17.9■□□□□ 0.46
SDHD-212ENST00000531744 ARHGEF25Q86VW2 580 aa17.9■□□□□ 0.46
SDHD-212ENST00000531744 ZNF692Q9BU19 519 aaPredicted RBP17.9■□□□□ 0.46
SDHD-212ENST00000531744 KTN1Q86UP2 1357 aaKnown RBP17.9■□□□□ 0.46
SDHD-212ENST00000531744 PSDA5PKW4 1024 aaPredicted RBP17.89■□□□□ 0.45
SDHD-212ENST00000531744 EZH2Q15910 746 aaKnown RBP17.89■□□□□ 0.45
SDHD-212ENST00000531744 CAMKK2Q96RR4 588 aa17.89■□□□□ 0.45
SDHD-212ENST00000531744 TONSLQ96HA7 1378 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms