RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.7□□□□□ -0.38
NPIPA3-202ENST00000531598 COG3Q96JB2 828 aa12.7□□□□□ -0.38
NPIPA3-202ENST00000531598 SETD1BQ9UPS6 1966 aaKnown RBP12.7□□□□□ -0.38
NPIPA3-202ENST00000531598 XRN1Q8IZH2 1706 aaKnown RBP12.7□□□□□ -0.38
NPIPA3-202ENST00000531598 PTPRUQ92729 1446 aa12.7□□□□□ -0.38
NPIPA3-202ENST00000531598 NEFMP07197 916 aa12.69□□□□□ -0.38
NPIPA3-202ENST00000531598 KCNA4P22459 653 aa12.69□□□□□ -0.38
NPIPA3-202ENST00000531598 WDR63Q8IWG1 891 aa12.69□□□□□ -0.38
NPIPA3-202ENST00000531598 GGNBP2Q9H3C7 697 aa12.69□□□□□ -0.38
NPIPA3-202ENST00000531598 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
NPIPA3-202ENST00000531598 KIF20BQ96Q89 1820 aa12.69□□□□□ -0.38
NPIPA3-202ENST00000531598 DIAPH1O60610 1272 aaKnown RBP12.68□□□□□ -0.38
NPIPA3-202ENST00000531598 APAF1O14727 1248 aa12.67□□□□□ -0.38
NPIPA3-202ENST00000531598 TNNT2P45379 298 aaPredicted RBP12.67□□□□□ -0.38
NPIPA3-202ENST00000531598 RRP1P56182 461 aaKnown RBP12.67□□□□□ -0.38
NPIPA3-202ENST00000531598 ITSN1Q15811 1721 aa12.66□□□□□ -0.38
NPIPA3-202ENST00000531598 MON2Q7Z3U7 1717 aa12.66□□□□□ -0.38
NPIPA3-202ENST00000531598 NPHP4O75161 1426 aaPredicted RBP12.66□□□□□ -0.38
NPIPA3-202ENST00000531598 U2AF1L5P0DN76 240 aaPredicted RBP12.66□□□□□ -0.38
NPIPA3-202ENST00000531598 U2AF1Q01081 240 aaKnown RBP eCLIP12.66□□□□□ -0.38
NPIPA3-202ENST00000531598 SLFN5Q08AF3 891 aa12.66□□□□□ -0.38
NPIPA3-202ENST00000531598 TRMT2AQ8IZ69 625 aaKnown RBP12.66□□□□□ -0.38
NPIPA3-202ENST00000531598 TOPAZ1Q8N9V7 1692 aa12.66□□□□□ -0.38
NPIPA3-202ENST00000531598 CDK12Q9NYV4 1490 aaPredicted RBP12.65□□□□□ -0.38
NPIPA3-202ENST00000531598 MAPK8IP3Q9UPT6 1336 aa12.65□□□□□ -0.38
NPIPA3-202ENST00000531598 USP6P35125 1406 aa12.65□□□□□ -0.38
NPIPA3-202ENST00000531598 SHPRHQ149N8 1683 aa12.65□□□□□ -0.38
NPIPA3-202ENST00000531598 FCHSD2O94868 740 aa12.65□□□□□ -0.38
NPIPA3-202ENST00000531598 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.65□□□□□ -0.38
NPIPA3-202ENST00000531598 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
NPIPA3-202ENST00000531598 NKTRP30414 1462 aaKnown RBP12.65□□□□□ -0.38
NPIPA3-202ENST00000531598 IQSEC2Q5JU85 1478 aa12.65□□□□□ -0.38
NPIPA3-202ENST00000531598 PRR36Q9H6K5 1346 aa12.64□□□□□ -0.39
NPIPA3-202ENST00000531598 CT47B1P0C2W7 299 aaPredicted RBP12.64□□□□□ -0.39
NPIPA3-202ENST00000531598 DUSP27Q5VZP5 1158 aa12.64□□□□□ -0.39
NPIPA3-202ENST00000531598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.64□□□□□ -0.39
NPIPA3-202ENST00000531598 MYH16Q9H6N6 1097 aa12.64□□□□□ -0.39
NPIPA3-202ENST00000531598 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
NPIPA3-202ENST00000531598 AKAP12Q02952 1782 aa12.64□□□□□ -0.39
NPIPA3-202ENST00000531598 ACEP12821 1306 aa12.63□□□□□ -0.39
NPIPA3-202ENST00000531598 IL16Q14005 1332 aa12.63□□□□□ -0.39
NPIPA3-202ENST00000531598 TTC21BQ7Z4L5 1316 aa12.63□□□□□ -0.39
NPIPA3-202ENST00000531598 LRRC7Q96NW7 1537 aa12.63□□□□□ -0.39
NPIPA3-202ENST00000531598 KCNA6P17658 529 aa12.63□□□□□ -0.39
NPIPA3-202ENST00000531598 CALD1Q05682 793 aaKnown RBP12.63□□□□□ -0.39
NPIPA3-202ENST00000531598 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
NPIPA3-202ENST00000531598 KIF24Q5T7B8 1368 aa12.63□□□□□ -0.39
NPIPA3-202ENST00000531598 USP31Q70CQ4 1352 aa12.62□□□□□ -0.39
NPIPA3-202ENST00000531598 WWC1Q8IX03 1113 aa12.62□□□□□ -0.39
NPIPA3-202ENST00000531598 CCDC146Q8IYE0 955 aa12.62□□□□□ -0.39
NPIPA3-202ENST00000531598 POLKQ9UBT6 870 aa12.62□□□□□ -0.39
NPIPA3-202ENST00000531598 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
NPIPA3-202ENST00000531598 NGDNQ8NEJ9 315 aaKnown RBP12.61□□□□□ -0.39
NPIPA3-202ENST00000531598 CDCA7LQ96GN5 454 aa12.61□□□□□ -0.39
NPIPA3-202ENST00000531598 OVOS2A0A0J9YW53 1432 aa12.61□□□□□ -0.39
NPIPA3-202ENST00000531598 OVOS2Q6IE36 1432 aa12.61□□□□□ -0.39
NPIPA3-202ENST00000531598 ADGRL3Q9HAR2 1447 aa12.61□□□□□ -0.39
NPIPA3-202ENST00000531598 NCOA3Q9Y6Q9 1424 aa12.61□□□□□ -0.39
NPIPA3-202ENST00000531598 U2SURPO15042 1029 aaKnown RBP12.6□□□□□ -0.39
NPIPA3-202ENST00000531598 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
NPIPA3-202ENST00000531598 AAMPQ13685 434 aa12.6□□□□□ -0.39
NPIPA3-202ENST00000531598 NRKQ7Z2Y5 1582 aa12.6□□□□□ -0.39
NPIPA3-202ENST00000531598 NME9Q86XW9 330 aa12.59□□□□□ -0.39
NPIPA3-202ENST00000531598 NWD1Q149M9 1564 aa12.59□□□□□ -0.39
NPIPA3-202ENST00000531598 PLEKHF1Q96S99 279 aa12.58□□□□□ -0.4
NPIPA3-202ENST00000531598 CHD2O14647 1828 aaKnown RBP12.58□□□□□ -0.4
NPIPA3-202ENST00000531598 FMN2Q9NZ56 1722 aa12.57□□□□□ -0.4
NPIPA3-202ENST00000531598 MS4A1P11836 297 aa12.56□□□□□ -0.4
NPIPA3-202ENST00000531598 IL13P35225 146 aa12.56□□□□□ -0.4
NPIPA3-202ENST00000531598 TMPOP42166 694 aaKnown RBP12.56□□□□□ -0.4
NPIPA3-202ENST00000531598 ZNF428Q96B54 188 aa12.56□□□□□ -0.4
NPIPA3-202ENST00000531598 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
NPIPA3-202ENST00000531598 IRX6P78412 446 aaPredicted RBP12.55□□□□□ -0.4
NPIPA3-202ENST00000531598 HAP1P54257 671 aaPredicted RBP12.54□□□□□ -0.4
NPIPA3-202ENST00000531598 PDE3AQ14432 1141 aa12.54□□□□□ -0.4
NPIPA3-202ENST00000531598 RSPH6AQ9H0K4 717 aa12.54□□□□□ -0.4
NPIPA3-202ENST00000531598 PHF8Q9UPP1 1060 aa12.54□□□□□ -0.4
NPIPA3-202ENST00000531598 SBNO1A3KN83 1393 aa12.54□□□□□ -0.4
NPIPA3-202ENST00000531598 DCCP43146 1447 aa12.54□□□□□ -0.4
NPIPA3-202ENST00000531598 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
NPIPA3-202ENST00000531598 NFE2L2Q16236 605 aa12.53□□□□□ -0.4
NPIPA3-202ENST00000531598 USP54Q70EL1 1684 aa12.53□□□□□ -0.4
NPIPA3-202ENST00000531598 NALCNQ8IZF0 1738 aa12.53□□□□□ -0.4
NPIPA3-202ENST00000531598 RTL1A6NKG5 1358 aa12.53□□□□□ -0.4
NPIPA3-202ENST00000531598 FLT4P35916 1363 aa12.53□□□□□ -0.4
NPIPA3-202ENST00000531598 RNF39Q9H2S5 420 aa12.52□□□□□ -0.41
NPIPA3-202ENST00000531598 EMILIN1Q9Y6C2 1016 aa12.52□□□□□ -0.41
NPIPA3-202ENST00000531598 NCKAP5LQ9HCH0 1330 aa12.52□□□□□ -0.41
NPIPA3-202ENST00000531598 ARHGEF10O15013 1369 aa12.52□□□□□ -0.41
NPIPA3-202ENST00000531598 PRKAR2BP31323 418 aa12.51□□□□□ -0.41
NPIPA3-202ENST00000531598 RIPK4P57078 832 aa12.51□□□□□ -0.41
NPIPA3-202ENST00000531598 C14orf37Q86TY3 774 aa12.51□□□□□ -0.41
NPIPA3-202ENST00000531598 KCNH5Q8NCM2 988 aa12.51□□□□□ -0.41
NPIPA3-202ENST00000531598 C19orf44Q9H6X5 657 aa12.51□□□□□ -0.41
NPIPA3-202ENST00000531598 SENP3-EIF4A1A0A087X0R7 540 aa12.5□□□□□ -0.41
NPIPA3-202ENST00000531598 NEUROD2Q15784 382 aa12.5□□□□□ -0.41
NPIPA3-202ENST00000531598 PMFBP1Q8TBY8 1022 aa12.5□□□□□ -0.41
NPIPA3-202ENST00000531598 NUTM2FA1L443 756 aa12.49□□□□□ -0.41
NPIPA3-202ENST00000531598 NLRP6P59044 892 aa12.49□□□□□ -0.41
NPIPA3-202ENST00000531598 GNAI1P63096 354 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms