RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 FAM98CQ17RN3 349 aaKnown RBP18.59■□□□□ 0.57
TM9SF1-211ENST00000531406 NBPF1Q3BBV0 1214 aa18.58■□□□□ 0.56
TM9SF1-211ENST00000531406 ARHGEF28Q8N1W1 1705 aaKnown RBP18.57■□□□□ 0.56
TM9SF1-211ENST00000531406 A0A0G2JS52 829 aa18.57■□□□□ 0.56
TM9SF1-211ENST00000531406 MYT1Q01538 1121 aa18.57■□□□□ 0.56
TM9SF1-211ENST00000531406 SF3B2Q13435 895 aaKnown RBP18.57■□□□□ 0.56
TM9SF1-211ENST00000531406 DEFB132Q7Z7B7 95 aa18.57■□□□□ 0.56
TM9SF1-211ENST00000531406 PRDM11Q9NQV5 511 aa18.57■□□□□ 0.56
TM9SF1-211ENST00000531406 CCDC61Q9Y6R9 512 aa18.57■□□□□ 0.56
TM9SF1-211ENST00000531406 ACEP12821 1306 aa18.56■□□□□ 0.56
TM9SF1-211ENST00000531406 NBPF8Q3BBV2 869 aa18.56■□□□□ 0.56
TM9SF1-211ENST00000531406 POLR3AO14802 1390 aaPredicted RBP18.55■□□□□ 0.56
TM9SF1-211ENST00000531406 SPATA31A5Q5VU36 1347 aa18.55■□□□□ 0.56
TM9SF1-211ENST00000531406 SPATA31A7Q8IWB4 1347 aa18.55■□□□□ 0.56
TM9SF1-211ENST00000531406 PLEKHG3A1L390 1219 aa18.55■□□□□ 0.56
TM9SF1-211ENST00000531406 COL14A1Q05707 1796 aaKnown RBP18.55■□□□□ 0.56
TM9SF1-211ENST00000531406 NUTM2GQ5VZR2 741 aa18.54■□□□□ 0.56
TM9SF1-211ENST00000531406 KIAA0232Q92628 1395 aa18.54■□□□□ 0.56
TM9SF1-211ENST00000531406 SRCAPQ6ZRS2 3230 aa18.53■□□□□ 0.56
TM9SF1-211ENST00000531406 NRAPQ86VF7 1730 aa18.53■□□□□ 0.56
TM9SF1-211ENST00000531406 BRWD3Q6RI45 1802 aa18.53■□□□□ 0.56
TM9SF1-211ENST00000531406 CHRNA2Q15822 529 aa18.52■□□□□ 0.56
TM9SF1-211ENST00000531406 KIAA1210Q9ULL0 1709 aa18.52■□□□□ 0.55
TM9SF1-211ENST00000531406 CENPJQ9HC77 1338 aaPredicted RBP18.51■□□□□ 0.55
TM9SF1-211ENST00000531406 ZC3H6P61129 1189 aaKnown RBP18.51■□□□□ 0.55
TM9SF1-211ENST00000531406 ITSN1Q15811 1721 aa18.5■□□□□ 0.55
TM9SF1-211ENST00000531406 CRYBG1Q9Y4K1 1723 aa18.5■□□□□ 0.55
TM9SF1-211ENST00000531406 SRPK2P78362 688 aaKnown RBP18.5■□□□□ 0.55
TM9SF1-211ENST00000531406 ABTB2Q8N961 1025 aa18.49■□□□□ 0.55
TM9SF1-211ENST00000531406 L3MBTL2Q969R5 705 aa18.49■□□□□ 0.55
TM9SF1-211ENST00000531406 SPATA31A1Q5TZJ5 1347 aa18.49■□□□□ 0.55
TM9SF1-211ENST00000531406 FAM182BQ5T319 152 aa18.48■□□□□ 0.55
TM9SF1-211ENST00000531406 CABP2Q9NPB3 220 aa18.48■□□□□ 0.55
TM9SF1-211ENST00000531406 STRN4Q9NRL3 753 aa18.48■□□□□ 0.55
TM9SF1-211ENST00000531406 BAG6P46379 1132 aa18.47■□□□□ 0.55
TM9SF1-211ENST00000531406 TOPAZ1Q8N9V7 1692 aa18.47■□□□□ 0.55
TM9SF1-211ENST00000531406 PPIP5K1Q6PFW1 1433 aa18.46■□□□□ 0.55
TM9SF1-211ENST00000531406 USP19O94966 1318 aa18.46■□□□□ 0.55
TM9SF1-211ENST00000531406 EVA1CP58658 441 aa18.45■□□□□ 0.54
TM9SF1-211ENST00000531406 NLRP13Q86W25 1043 aa18.44■□□□□ 0.54
TM9SF1-211ENST00000531406 SIN3AQ96ST3 1273 aa18.44■□□□□ 0.54
TM9SF1-211ENST00000531406 CABP1Q9NZU7 370 aa18.44■□□□□ 0.54
TM9SF1-211ENST00000531406 PHRF1Q9P1Y6 1649 aaKnown RBP18.44■□□□□ 0.54
TM9SF1-211ENST00000531406 THSD7AQ9UPZ6 1657 aa18.44■□□□□ 0.54
TM9SF1-211ENST00000531406 CPDO75976 1380 aa18.43■□□□□ 0.54
TM9SF1-211ENST00000531406 GCP02774 474 aa18.43■□□□□ 0.54
TM9SF1-211ENST00000531406 BRD4O60885 1362 aaPredicted RBP18.42■□□□□ 0.54
TM9SF1-211ENST00000531406 SSH2Q76I76 1423 aa18.42■□□□□ 0.54
TM9SF1-211ENST00000531406 EN1Q05925 392 aaPredicted RBP18.42■□□□□ 0.54
TM9SF1-211ENST00000531406 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
TM9SF1-211ENST00000531406 LARP1Q6PKG0 1096 aaKnown RBP18.41■□□□□ 0.54
TM9SF1-211ENST00000531406 BARGINQ6ZT62 677 aa18.41■□□□□ 0.54
TM9SF1-211ENST00000531406 NRKQ7Z2Y5 1582 aa18.4■□□□□ 0.54
TM9SF1-211ENST00000531406 NEUROD1Q13562 356 aa18.4■□□□□ 0.54
TM9SF1-211ENST00000531406 CAMTA1Q9Y6Y1 1673 aa18.4■□□□□ 0.54
TM9SF1-211ENST00000531406 PSDA5PKW4 1024 aaPredicted RBP18.39■□□□□ 0.53
TM9SF1-211ENST00000531406 FAM196AQ6ZSG2 479 aa18.39■□□□□ 0.53
TM9SF1-211ENST00000531406 EVC2Q86UK5 1308 aa18.39■□□□□ 0.53
TM9SF1-211ENST00000531406 NLRP6P59044 892 aa18.38■□□□□ 0.53
TM9SF1-211ENST00000531406 TCP11L2Q8N4U5 519 aa18.38■□□□□ 0.53
TM9SF1-211ENST00000531406 DISP2A7MBM2 1401 aa18.38■□□□□ 0.53
TM9SF1-211ENST00000531406 USP6P35125 1406 aa18.38■□□□□ 0.53
TM9SF1-211ENST00000531406 TRIM37O94972 964 aa18.37■□□□□ 0.53
TM9SF1-211ENST00000531406 PDE3BQ13370 1112 aa18.37■□□□□ 0.53
TM9SF1-211ENST00000531406 QRICH2Q9H0J4 1663 aa18.35■□□□□ 0.53
TM9SF1-211ENST00000531406 ROCK2O75116 1388 aaKnown RBP18.35■□□□□ 0.53
TM9SF1-211ENST00000531406 THRAP3Q9Y2W1 955 aaKnown RBP18.35■□□□□ 0.53
TM9SF1-211ENST00000531406 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
TM9SF1-211ENST00000531406 ZBTB7CA1YPR0 619 aa18.34■□□□□ 0.53
TM9SF1-211ENST00000531406 EZH2Q15910 746 aaKnown RBP18.34■□□□□ 0.53
TM9SF1-211ENST00000531406 CAMKK2Q96RR4 588 aa18.34■□□□□ 0.53
TM9SF1-211ENST00000531406 RGPD1P0DJD0 1748 aa18.34■□□□□ 0.53
TM9SF1-211ENST00000531406 AATKQ6ZMQ8 1374 aa18.33■□□□□ 0.53
TM9SF1-211ENST00000531406 APBA3O96018 575 aa18.33■□□□□ 0.52
TM9SF1-211ENST00000531406 R3HDM1Q15032 1099 aaKnown RBP18.33■□□□□ 0.52
TM9SF1-211ENST00000531406 ZNF692Q9BU19 519 aaPredicted RBP18.33■□□□□ 0.52
TM9SF1-211ENST00000531406 COL5A2P05997 1499 aaPredicted RBP18.33■□□□□ 0.52
TM9SF1-211ENST00000531406 TRPM1Q7Z4N2 1603 aa18.32■□□□□ 0.52
TM9SF1-211ENST00000531406 TTC21BQ7Z4L5 1316 aa18.31■□□□□ 0.52
TM9SF1-211ENST00000531406 SLIT3O75094 1523 aa18.31■□□□□ 0.52
TM9SF1-211ENST00000531406 CRB1P82279 1406 aa18.31■□□□□ 0.52
TM9SF1-211ENST00000531406 TNS1Q9HBL0 1735 aaKnown RBP18.29■□□□□ 0.52
TM9SF1-211ENST00000531406 PARD3Q8TEW0 1356 aa18.29■□□□□ 0.52
TM9SF1-211ENST00000531406 AXIN2Q9Y2T1 843 aa18.28■□□□□ 0.52
TM9SF1-211ENST00000531406 LRP5O75197 1615 aa18.27■□□□□ 0.52
TM9SF1-211ENST00000531406 TOM1L2Q6ZVM7 507 aa18.27■□□□□ 0.52
TM9SF1-211ENST00000531406 ARHGEF25Q86VW2 580 aa18.27■□□□□ 0.52
TM9SF1-211ENST00000531406 TTC21AQ8NDW8 1320 aa18.26■□□□□ 0.51
TM9SF1-211ENST00000531406 CPSF1Q10570 1443 aaKnown RBP18.26■□□□□ 0.51
TM9SF1-211ENST00000531406 KCNH5Q8NCM2 988 aa18.26■□□□□ 0.51
TM9SF1-211ENST00000531406 WDR17Q8IZU2 1322 aa18.25■□□□□ 0.51
TM9SF1-211ENST00000531406 PIK3C2AO00443 1686 aa18.25■□□□□ 0.51
TM9SF1-211ENST00000531406 C11orf95C9JLR9 678 aaPredicted RBP18.25■□□□□ 0.51
TM9SF1-211ENST00000531406 CARD11Q9BXL7 1154 aa18.25■□□□□ 0.51
TM9SF1-211ENST00000531406 KTN1Q86UP2 1357 aaKnown RBP18.25■□□□□ 0.51
TM9SF1-211ENST00000531406 SOX12O15370 315 aa18.24■□□□□ 0.51
TM9SF1-211ENST00000531406 SBNO2Q9Y2G9 1366 aa18.23■□□□□ 0.51
TM9SF1-211ENST00000531406 DDB1Q16531 1140 aa18.23■□□□□ 0.51
TM9SF1-211ENST00000531406 OVOS2A0A0G2JMS6 1433 aa18.22■□□□□ 0.51
TM9SF1-211ENST00000531406 OVOS2A0A0J9YW53 1432 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms