RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 KRT28Q7Z3Y7 464 aa25.98■■□□□ 1.75
SMPD1-205ENST00000531303 NME9Q86XW9 330 aa25.97■■□□□ 1.75
SMPD1-205ENST00000531303 GGNBP2Q9H3C7 697 aa25.97■■□□□ 1.75
SMPD1-205ENST00000531303 KIF20BQ96Q89 1820 aa25.96■■□□□ 1.75
SMPD1-205ENST00000531303 NRKQ7Z2Y5 1582 aa25.95■■□□□ 1.75
SMPD1-205ENST00000531303 IQSEC2Q5JU85 1478 aa25.95■■□□□ 1.74
SMPD1-205ENST00000531303 FYB1O15117 783 aa25.95■■□□□ 1.74
SMPD1-205ENST00000531303 MIER1Q8N108 512 aa25.95■■□□□ 1.74
SMPD1-205ENST00000531303 NPHP3Q7Z494 1330 aa25.94■■□□□ 1.74
SMPD1-205ENST00000531303 ZRANB1Q9UGI0 708 aa25.94■■□□□ 1.74
SMPD1-205ENST00000531303 ROBO1Q9Y6N7 1651 aa25.94■■□□□ 1.74
SMPD1-205ENST00000531303 SSH2Q76I76 1423 aa25.93■■□□□ 1.74
SMPD1-205ENST00000531303 PRKRIP1Q9H875 184 aaPredicted RBP25.93■■□□□ 1.74
SMPD1-205ENST00000531303 NUTM2GQ5VZR2 741 aa25.91■■□□□ 1.74
SMPD1-205ENST00000531303 LMOD2Q6P5Q4 547 aa25.91■■□□□ 1.74
SMPD1-205ENST00000531303 MORC1Q86VD1 984 aa25.91■■□□□ 1.74
SMPD1-205ENST00000531303 NPC1L1Q9UHC9 1359 aa25.91■■□□□ 1.74
SMPD1-205ENST00000531303 TTC21AQ8NDW8 1320 aa25.9■■□□□ 1.74
SMPD1-205ENST00000531303 TNNT2P45379 298 aaPredicted RBP25.9■■□□□ 1.74
SMPD1-205ENST00000531303 ABTB2Q8N961 1025 aa25.89■■□□□ 1.73
SMPD1-205ENST00000531303 NSD2O96028 1365 aa25.88■■□□□ 1.73
SMPD1-205ENST00000531303 PLEKHG5O94827 1062 aa25.88■■□□□ 1.73
SMPD1-205ENST00000531303 TRPM3Q9HCF6 1732 aaPredicted RBP25.88■■□□□ 1.73
SMPD1-205ENST00000531303 PXDNQ92626 1479 aa25.87■■□□□ 1.73
SMPD1-205ENST00000531303 BRD4O60885 1362 aaPredicted RBP25.87■■□□□ 1.73
SMPD1-205ENST00000531303 PIK3C2AO00443 1686 aa25.87■■□□□ 1.73
SMPD1-205ENST00000531303 RALBP1Q15311 655 aa25.86■■□□□ 1.73
SMPD1-205ENST00000531303 COG3Q96JB2 828 aa25.86■■□□□ 1.73
SMPD1-205ENST00000531303 PARD3Q8TEW0 1356 aa25.86■■□□□ 1.73
SMPD1-205ENST00000531303 ANKRD26Q9UPS8 1709 aa25.86■■□□□ 1.73
SMPD1-205ENST00000531303 NLRP6P59044 892 aa25.85■■□□□ 1.73
SMPD1-205ENST00000531303 NHSL1Q5SYE7 1610 aa25.85■■□□□ 1.73
SMPD1-205ENST00000531303 SOS2Q07890 1332 aaPredicted RBP25.83■■□□□ 1.73
SMPD1-205ENST00000531303 SBNO1A3KN83 1393 aa25.82■■□□□ 1.72
SMPD1-205ENST00000531303 SOX12O15370 315 aa25.81■■□□□ 1.72
SMPD1-205ENST00000531303 FBLN1P23142 703 aa25.79■■□□□ 1.72
SMPD1-205ENST00000531303 SPATA31A3Q5VYP0 1347 aa25.79■■□□□ 1.72
SMPD1-205ENST00000531303 TNS3Q68CZ2 1445 aa25.79■■□□□ 1.72
SMPD1-205ENST00000531303 ALS2Q96Q42 1657 aa25.79■■□□□ 1.72
SMPD1-205ENST00000531303 MYBBP1AQ9BQG0 1328 aaKnown RBP25.79■■□□□ 1.72
SMPD1-205ENST00000531303 PHLPP1O60346 1717 aa25.78■■□□□ 1.72
SMPD1-205ENST00000531303 AHDC1Q5TGY3 1603 aaPredicted RBP25.78■■□□□ 1.72
SMPD1-205ENST00000531303 OVOS2A0A0J9YW53 1432 aa25.78■■□□□ 1.72
SMPD1-205ENST00000531303 OVOS2Q6IE36 1432 aa25.78■■□□□ 1.72
SMPD1-205ENST00000531303 USP31Q70CQ4 1352 aa25.78■■□□□ 1.72
SMPD1-205ENST00000531303 PPP2R1AP30153 589 aa25.78■■□□□ 1.72
SMPD1-205ENST00000531303 NLRP13Q86W25 1043 aa25.78■■□□□ 1.72
SMPD1-205ENST00000531303 MARF1Q9Y4F3 1742 aaKnown RBP25.76■■□□□ 1.71
SMPD1-205ENST00000531303 ARHGEF10O15013 1369 aa25.73■■□□□ 1.71
SMPD1-205ENST00000531303 MAP2P11137 1827 aaKnown RBP25.73■■□□□ 1.71
SMPD1-205ENST00000531303 CCDC184Q52MB2 194 aa25.72■■□□□ 1.71
SMPD1-205ENST00000531303 LRRC59Q96AG4 307 aaKnown RBP25.72■■□□□ 1.71
SMPD1-205ENST00000531303 CABLES1Q8TDN4 633 aa25.72■■□□□ 1.71
SMPD1-205ENST00000531303 USP54Q70EL1 1684 aa25.71■■□□□ 1.71
SMPD1-205ENST00000531303 PPM1GO15355 546 aaPredicted RBP25.7■■□□□ 1.7
SMPD1-205ENST00000531303 RRS1Q15050 365 aaKnown RBP25.7■■□□□ 1.7
SMPD1-205ENST00000531303 COL16A1Q07092 1604 aaPredicted RBP25.69■■□□□ 1.7
SMPD1-205ENST00000531303 MTHFSP49914 203 aa25.69■■□□□ 1.7
SMPD1-205ENST00000531303 CCER2I3L3R5 266 aa25.68■■□□□ 1.7
SMPD1-205ENST00000531303 MRS2Q9HD23 443 aa25.68■■□□□ 1.7
SMPD1-205ENST00000531303 MED1Q15648 1581 aaPredicted RBP25.67■■□□□ 1.7
SMPD1-205ENST00000531303 ZBTB7CA1YPR0 619 aa25.67■■□□□ 1.7
SMPD1-205ENST00000531303 POLKQ9UBT6 870 aa25.67■■□□□ 1.7
SMPD1-205ENST00000531303 USP19O94966 1318 aa25.67■■□□□ 1.7
SMPD1-205ENST00000531303 GCP02774 474 aa25.66■■□□□ 1.7
SMPD1-205ENST00000531303 EMILIN1Q9Y6C2 1016 aa25.66■■□□□ 1.7
SMPD1-205ENST00000531303 KCNH5Q8NCM2 988 aa25.66■■□□□ 1.7
SMPD1-205ENST00000531303 AATKQ6ZMQ8 1374 aa25.65■■□□□ 1.7
SMPD1-205ENST00000531303 HAP1P54257 671 aaPredicted RBP25.65■■□□□ 1.7
SMPD1-205ENST00000531303 SLIT3O75094 1523 aa25.63■■□□□ 1.69
SMPD1-205ENST00000531303 ZC3H6P61129 1189 aaKnown RBP25.63■■□□□ 1.69
SMPD1-205ENST00000531303 PHRF1Q9P1Y6 1649 aaKnown RBP25.62■■□□□ 1.69
SMPD1-205ENST00000531303 HSPA1LP34931 641 aa25.62■■□□□ 1.69
SMPD1-205ENST00000531303 MAP3K19Q56UN5 1328 aa25.62■■□□□ 1.69
SMPD1-205ENST00000531303 PNPLA6Q8IY17 1366 aa25.62■■□□□ 1.69
SMPD1-205ENST00000531303 NFAT5O94916 1531 aa25.61■■□□□ 1.69
SMPD1-205ENST00000531303 CRYBG1Q9Y4K1 1723 aa25.61■■□□□ 1.69
SMPD1-205ENST00000531303 LTN1O94822 1766 aa25.61■■□□□ 1.69
SMPD1-205ENST00000531303 AMPHP49418 695 aa25.6■■□□□ 1.69
SMPD1-205ENST00000531303 CFAP53Q96M91 514 aa25.6■■□□□ 1.69
SMPD1-205ENST00000531303 ABCA3Q99758 1704 aa25.58■■□□□ 1.68
SMPD1-205ENST00000531303 PEAK1Q9H792 1746 aa25.58■■□□□ 1.68
SMPD1-205ENST00000531303 ARHGEF25Q86VW2 580 aa25.55■■□□□ 1.68
SMPD1-205ENST00000531303 COL22A1Q8NFW1 1626 aaPredicted RBP25.55■■□□□ 1.68
SMPD1-205ENST00000531303 SMG6Q86US8 1419 aaKnown RBP25.55■■□□□ 1.68
SMPD1-205ENST00000531303 NUTM2BA6NNL0 878 aaPredicted RBP25.54■■□□□ 1.68
SMPD1-205ENST00000531303 NUTM2EB1AL46 878 aaPredicted RBP25.54■■□□□ 1.68
SMPD1-205ENST00000531303 NUTM2AQ8IVF1 878 aaPredicted RBP25.54■■□□□ 1.68
SMPD1-205ENST00000531303 CHRNA2Q15822 529 aa25.53■■□□□ 1.68
SMPD1-205ENST00000531303 HSP90AB2PQ58FF8 381 aa25.53■■□□□ 1.68
SMPD1-205ENST00000531303 KIAA0232Q92628 1395 aa25.53■■□□□ 1.68
SMPD1-205ENST00000531303 FAM9BQ8IZU0 186 aa25.53■■□□□ 1.68
SMPD1-205ENST00000531303 CDK12Q9NYV4 1490 aaPredicted RBP25.52■■□□□ 1.68
SMPD1-205ENST00000531303 FLT4P35916 1363 aa25.52■■□□□ 1.68
SMPD1-205ENST00000531303 JCADQ9P266 1359 aa25.52■■□□□ 1.68
SMPD1-205ENST00000531303 HOXC9P31274 260 aa25.52■■□□□ 1.68
SMPD1-205ENST00000531303 SHPRHQ149N8 1683 aa25.51■■□□□ 1.67
SMPD1-205ENST00000531303 DIAPH1O60610 1272 aaKnown RBP25.5■■□□□ 1.67
SMPD1-205ENST00000531303 PNISRQ8TF01 805 aaKnown RBP25.5■■□□□ 1.67
SMPD1-205ENST00000531303 IP6K1Q92551 441 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms