RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 TBC1D2Q9BYX2 928 aa8.85□□□□□ -0.99
SOX6-214ENST00000531297 PRPF38BQ5VTL8 546 aaKnown RBP8.84□□□□□ -0.99
SOX6-214ENST00000531297 BAP1Q92560 729 aa8.84□□□□□ -0.99
SOX6-214ENST00000531297 AK7Q96M32 723 aa8.84□□□□□ -0.99
SOX6-214ENST00000531297 SCARF1Q14162 830 aa8.83□□□□□ -1
SOX6-214ENST00000531297 LINC01559Q495D7 138 aa8.83□□□□□ -1
SOX6-214ENST00000531297 RSBN1LQ6PCB5 846 aaPredicted RBP8.83□□□□□ -1
SOX6-214ENST00000531297 LYPD8Q6UX82 237 aa8.82□□□□□ -1
SOX6-214ENST00000531297 ARMC2Q8NEN0 867 aa8.82□□□□□ -1
SOX6-214ENST00000531297 NXF1Q9UBU9 619 aaKnown RBP8.82□□□□□ -1
SOX6-214ENST00000531297 SPTLC1O15269 473 aa8.81□□□□□ -1
SOX6-214ENST00000531297 AGERQ15109 404 aa8.81□□□□□ -1
SOX6-214ENST00000531297 IRF7Q92985 503 aa8.81□□□□□ -1
SOX6-214ENST00000531297 ADH1CP00326 375 aa8.8□□□□□ -1
SOX6-214ENST00000531297 NNTQ13423 1086 aa8.8□□□□□ -1
SOX6-214ENST00000531297 PARP9Q8IXQ6 854 aa8.8□□□□□ -1
SOX6-214ENST00000531297 TRIM66O15016 1216 aa8.79□□□□□ -1
SOX6-214ENST00000531297 RIC3Q7Z5B4 369 aa8.79□□□□□ -1
SOX6-214ENST00000531297 BPHLQ86WA6 291 aaPredicted RBP8.79□□□□□ -1
SOX6-214ENST00000531297 TLL2Q9Y6L7 1015 aa8.79□□□□□ -1
SOX6-214ENST00000531297 NUTM2BA6NNL0 878 aaPredicted RBP8.78□□□□□ -1
SOX6-214ENST00000531297 NUTM2EB1AL46 878 aaPredicted RBP8.78□□□□□ -1
SOX6-214ENST00000531297 BMP1P13497 986 aa8.78□□□□□ -1
SOX6-214ENST00000531297 NUTM2DQ5VT03 806 aaPredicted RBP8.78□□□□□ -1
SOX6-214ENST00000531297 NUTM2AQ8IVF1 878 aaPredicted RBP8.78□□□□□ -1
SOX6-214ENST00000531297 HELBQ8NG08 1087 aaPredicted RBP8.78□□□□□ -1
SOX6-214ENST00000531297 UPP2O95045 317 aa8.77□□□□□ -1.01
SOX6-214ENST00000531297 HRCP23327 699 aa8.77□□□□□ -1.01
SOX6-214ENST00000531297 NBPF14Q5TI25 921 aa8.77□□□□□ -1.01
SOX6-214ENST00000531297 WDR4P57081 412 aaKnown RBP8.76□□□□□ -1.01
SOX6-214ENST00000531297 NR5A1Q13285 461 aa8.76□□□□□ -1.01
SOX6-214ENST00000531297 TUSC1Q2TAM9 212 aa8.76□□□□□ -1.01
SOX6-214ENST00000531297 MRPL14Q6P1L8 145 aaKnown RBP8.76□□□□□ -1.01
SOX6-214ENST00000531297 TRIM46Q7Z4K8 759 aa8.76□□□□□ -1.01
SOX6-214ENST00000531297 ARID5BQ14865 1188 aa8.75□□□□□ -1.01
SOX6-214ENST00000531297 TSC1Q92574 1164 aa8.75□□□□□ -1.01
SOX6-214ENST00000531297 RSPH6AQ9H0K4 717 aa8.75□□□□□ -1.01
SOX6-214ENST00000531297 CFAP99D6REC4 459 aa8.74□□□□□ -1.01
SOX6-214ENST00000531297 ZFP42Q96MM3 310 aa8.74□□□□□ -1.01
SOX6-214ENST00000531297 CDK15Q96Q40 435 aa8.74□□□□□ -1.01
SOX6-214ENST00000531297 PCDHB15Q9Y5E8 787 aa8.74□□□□□ -1.01
SOX6-214ENST00000531297 CSPP1Q1MSJ5 1256 aa8.73□□□□□ -1.01
SOX6-214ENST00000531297 F12P00748 615 aaPredicted RBP8.72□□□□□ -1.01
SOX6-214ENST00000531297 TIMP2P16035 220 aa8.71□□□□□ -1.02
SOX6-214ENST00000531297 PDE4DQ08499 809 aa8.71□□□□□ -1.02
SOX6-214ENST00000531297 GPKOWQ92917 476 aaPredicted RBP eCLIP8.71□□□□□ -1.02
SOX6-214ENST00000531297 MAP10Q9P2G4 905 aa8.71□□□□□ -1.02
SOX6-214ENST00000531297 H3BM21 787 aa8.7□□□□□ -1.02
SOX6-214ENST00000531297 MAN1A2O60476 641 aa8.69□□□□□ -1.02
SOX6-214ENST00000531297 ZIC2O95409 532 aaPredicted RBP8.69□□□□□ -1.02
SOX6-214ENST00000531297 MYSM1Q5VVJ2 828 aa8.69□□□□□ -1.02
SOX6-214ENST00000531297 ZSCAN1Q8NBB4 408 aa8.69□□□□□ -1.02
SOX6-214ENST00000531297 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
SOX6-214ENST00000531297 CABLES1Q8TDN4 633 aa8.68□□□□□ -1.02
SOX6-214ENST00000531297 FOXJ1Q92949 421 aa8.68□□□□□ -1.02
SOX6-214ENST00000531297 MAP4K5Q9Y4K4 846 aa8.68□□□□□ -1.02
SOX6-214ENST00000531297 LILRB3O75022 631 aa8.67□□□□□ -1.02
SOX6-214ENST00000531297 CLK2P49760 499 aaKnown RBP8.67□□□□□ -1.02
SOX6-214ENST00000531297 VASH1Q7L8A9 365 aaPredicted RBP8.67□□□□□ -1.02
SOX6-214ENST00000531297 EMILIN1Q9Y6C2 1016 aa8.67□□□□□ -1.02
SOX6-214ENST00000531297 BMP2P12643 396 aa8.66□□□□□ -1.02
SOX6-214ENST00000531297 CDV3Q9UKY7 258 aaKnown RBP8.66□□□□□ -1.02
SOX6-214ENST00000531297 GMPRP36959 345 aa8.65□□□□□ -1.02
SOX6-214ENST00000531297 PNMA1Q8ND90 353 aa8.65□□□□□ -1.02
SOX6-214ENST00000531297 TRMT44Q8IYL2 757 aaKnown RBP8.64□□□□□ -1.03
SOX6-214ENST00000531297 TRIM52Q96A61 297 aa8.64□□□□□ -1.03
SOX6-214ENST00000531297 ITPKCQ96DU7 683 aa8.64□□□□□ -1.03
SOX6-214ENST00000531297 TSEN34Q9BSV6 310 aaKnown RBP8.64□□□□□ -1.03
SOX6-214ENST00000531297 KLF16Q9BXK1 252 aaPredicted RBP8.64□□□□□ -1.03
SOX6-214ENST00000531297 PGPEP1Q9NXJ5 209 aa8.64□□□□□ -1.03
SOX6-214ENST00000531297 LIMD1Q9UGP4 676 aa8.64□□□□□ -1.03
SOX6-214ENST00000531297 MAGEB6P1A0A0J9YX57 407 aa8.63□□□□□ -1.03
SOX6-214ENST00000531297 PER1O15534 1290 aaPredicted RBP8.63□□□□□ -1.03
SOX6-214ENST00000531297 FSHRP23945 695 aa8.63□□□□□ -1.03
SOX6-214ENST00000531297 QPCTQ16769 361 aa8.63□□□□□ -1.03
SOX6-214ENST00000531297 C6orf118Q5T5N4 469 aa8.63□□□□□ -1.03
SOX6-214ENST00000531297 LINC00528Q8N1L1 170 aa8.63□□□□□ -1.03
SOX6-214ENST00000531297 C1QTNF2Q9BXJ5 285 aa8.63□□□□□ -1.03
SOX6-214ENST00000531297 VEGFBP49765 207 aa8.62□□□□□ -1.03
SOX6-214ENST00000531297 SH3RF1Q7Z6J0 888 aa8.62□□□□□ -1.03
SOX6-214ENST00000531297 CCDC116Q8IYX3 515 aa8.62□□□□□ -1.03
SOX6-214ENST00000531297 MEIOBQ8N635 442 aa8.62□□□□□ -1.03
SOX6-214ENST00000531297 ZFAND3Q9H8U3 227 aa8.62□□□□□ -1.03
SOX6-214ENST00000531297 ATP1B4Q9UN42 357 aaPredicted RBP8.62□□□□□ -1.03
SOX6-214ENST00000531297 ZC3H4Q9UPT8 1303 aaKnown RBP8.61□□□□□ -1.03
SOX6-214ENST00000531297 GRM5P41594 1212 aa8.61□□□□□ -1.03
SOX6-214ENST00000531297 DHX9Q08211 1270 aaKnown RBP8.61□□□□□ -1.03
SOX6-214ENST00000531297 SLC24A3Q9HC58 644 aa8.61□□□□□ -1.03
SOX6-214ENST00000531297 VSIG8P0DPA2 414 aa8.6□□□□□ -1.03
SOX6-214ENST00000531297 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
SOX6-214ENST00000531297 SH3BP5LQ7L8J4 393 aa8.6□□□□□ -1.03
SOX6-214ENST00000531297 SLC10A4Q96EP9 437 aa8.6□□□□□ -1.03
SOX6-214ENST00000531297 NR3C2P08235 984 aa8.59□□□□□ -1.03
SOX6-214ENST00000531297 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.59□□□□□ -1.03
SOX6-214ENST00000531297 LCE2CQ5TA81 110 aa8.59□□□□□ -1.03
SOX6-214ENST00000531297 PDXDC2PQ6P474 469 aa8.59□□□□□ -1.03
SOX6-214ENST00000531297 ARHGAP9Q9BRR9 750 aa8.59□□□□□ -1.03
SOX6-214ENST00000531297 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
SOX6-214ENST00000531297 ZBTB33Q86T24 672 aa8.58□□□□□ -1.04
SOX6-214ENST00000531297 POLR3EQ9NVU0 708 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms