RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 PHRF1Q9P1Y6 1649 aaKnown RBP26.72■■□□□ 1.87
PACSIN3-208ENST00000531226 BRD4O60885 1362 aaPredicted RBP26.71■■□□□ 1.87
PACSIN3-208ENST00000531226 PAK3O75914 559 aaPredicted RBP26.71■■□□□ 1.87
PACSIN3-208ENST00000531226 ADAMTS2O95450 1211 aa26.7■■□□□ 1.86
PACSIN3-208ENST00000531226 TMF1P82094 1093 aa26.69■■□□□ 1.86
PACSIN3-208ENST00000531226 CPSF1Q10570 1443 aaKnown RBP26.69■■□□□ 1.86
PACSIN3-208ENST00000531226 SOCS7O14512 581 aa26.67■■□□□ 1.86
PACSIN3-208ENST00000531226 C8orf37Q96NL8 207 aa26.67■■□□□ 1.86
PACSIN3-208ENST00000531226 CD163L1Q9NR16 1453 aa26.67■■□□□ 1.86
PACSIN3-208ENST00000531226 PIK3C2AO00443 1686 aa26.66■■□□□ 1.86
PACSIN3-208ENST00000531226 SSH2Q76I76 1423 aa26.66■■□□□ 1.86
PACSIN3-208ENST00000531226 CABLES1Q8TDN4 633 aa26.66■■□□□ 1.86
PACSIN3-208ENST00000531226 EIF4G2P78344 907 aaKnown RBP eCLIP26.65■■□□□ 1.86
PACSIN3-208ENST00000531226 ZNF692Q9BU19 519 aaPredicted RBP26.65■■□□□ 1.86
PACSIN3-208ENST00000531226 NINLQ9Y2I6 1382 aa26.65■■□□□ 1.86
PACSIN3-208ENST00000531226 PLCH1Q4KWH8 1693 aa26.65■■□□□ 1.86
PACSIN3-208ENST00000531226 AFF2P51816 1311 aa26.65■■□□□ 1.86
PACSIN3-208ENST00000531226 MYOM1P52179 1685 aa26.64■■□□□ 1.86
PACSIN3-208ENST00000531226 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.64■■□□□ 1.85
PACSIN3-208ENST00000531226 PLEKHG5O94827 1062 aa26.63■■□□□ 1.85
PACSIN3-208ENST00000531226 HAP1P54257 671 aaPredicted RBP26.63■■□□□ 1.85
PACSIN3-208ENST00000531226 TMC1Q8TDI8 760 aa26.63■■□□□ 1.85
PACSIN3-208ENST00000531226 NWD2Q9ULI1 1742 aa26.62■■□□□ 1.85
PACSIN3-208ENST00000531226 KTN1Q86UP2 1357 aaKnown RBP26.62■■□□□ 1.85
PACSIN3-208ENST00000531226 ZNF772Q68DY9 489 aaPredicted RBP26.62■■□□□ 1.85
PACSIN3-208ENST00000531226 NGLY1Q96IV0 654 aa26.62■■□□□ 1.85
PACSIN3-208ENST00000531226 HSPA5P11021 654 aaKnown RBP26.61■■□□□ 1.85
PACSIN3-208ENST00000531226 ABTB2Q8N961 1025 aa26.61■■□□□ 1.85
PACSIN3-208ENST00000531226 SLC12A5Q9H2X9 1139 aa26.61■■□□□ 1.85
PACSIN3-208ENST00000531226 CDCA8Q53HL2 280 aa26.6■■□□□ 1.85
PACSIN3-208ENST00000531226 POTEAQ6S8J7 498 aa26.6■■□□□ 1.85
PACSIN3-208ENST00000531226 COL14A1Q05707 1796 aaKnown RBP26.59■■□□□ 1.85
PACSIN3-208ENST00000531226 USP54Q70EL1 1684 aa26.59■■□□□ 1.85
PACSIN3-208ENST00000531226 NUTM2GQ5VZR2 741 aa26.58■■□□□ 1.85
PACSIN3-208ENST00000531226 A0A1W2PP64 1363 aa26.58■■□□□ 1.84
PACSIN3-208ENST00000531226 HDGFL2Q7Z4V5 671 aaPredicted RBP26.57■■□□□ 1.84
PACSIN3-208ENST00000531226 FNBP4Q8N3X1 1017 aaPredicted RBP26.57■■□□□ 1.84
PACSIN3-208ENST00000531226 TTC21BQ7Z4L5 1316 aa26.57■■□□□ 1.84
PACSIN3-208ENST00000531226 SLIT2O94813 1529 aa26.56■■□□□ 1.84
PACSIN3-208ENST00000531226 TERF2IPQ9NYB0 399 aa26.56■■□□□ 1.84
PACSIN3-208ENST00000531226 USP19O94966 1318 aa26.56■■□□□ 1.84
PACSIN3-208ENST00000531226 TTC21AQ8NDW8 1320 aa26.56■■□□□ 1.84
PACSIN3-208ENST00000531226 NLRP13Q86W25 1043 aa26.55■■□□□ 1.84
PACSIN3-208ENST00000531226 NRAPQ86VF7 1730 aa26.55■■□□□ 1.84
PACSIN3-208ENST00000531226 EDC4Q6P2E9 1401 aaKnown RBP26.55■■□□□ 1.84
PACSIN3-208ENST00000531226 SLIT3O75094 1523 aa26.55■■□□□ 1.84
PACSIN3-208ENST00000531226 USP21Q9UK80 565 aa26.53■■□□□ 1.84
PACSIN3-208ENST00000531226 ANKRD36BQ8N2N9 1353 aa26.53■■□□□ 1.84
PACSIN3-208ENST00000531226 BCL9LQ86UU0 1499 aa26.53■■□□□ 1.84
PACSIN3-208ENST00000531226 NLRP6P59044 892 aa26.51■■□□□ 1.83
PACSIN3-208ENST00000531226 ATRNO75882 1429 aa26.49■■□□□ 1.83
PACSIN3-208ENST00000531226 KIF20BQ96Q89 1820 aa26.49■■□□□ 1.83
PACSIN3-208ENST00000531226 FAM83GA6ND36 823 aa26.48■■□□□ 1.83
PACSIN3-208ENST00000531226 KIAA0232Q92628 1395 aa26.47■■□□□ 1.83
PACSIN3-208ENST00000531226 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.47■■□□□ 1.83
PACSIN3-208ENST00000531226 QTRT2Q9H974 415 aaKnown RBP26.47■■□□□ 1.83
PACSIN3-208ENST00000531226 TRPC5Q9UL62 973 aaPredicted RBP26.46■■□□□ 1.83
PACSIN3-208ENST00000531226 LMO7Q8WWI1 1683 aa26.46■■□□□ 1.83
PACSIN3-208ENST00000531226 CPDO75976 1380 aa26.46■■□□□ 1.83
PACSIN3-208ENST00000531226 USP31Q70CQ4 1352 aa26.46■■□□□ 1.83
PACSIN3-208ENST00000531226 GCP02774 474 aa26.45■■□□□ 1.82
PACSIN3-208ENST00000531226 UNC5CLQ8IV45 518 aa26.45■■□□□ 1.82
PACSIN3-208ENST00000531226 PRDM11Q9NQV5 511 aa26.45■■□□□ 1.82
PACSIN3-208ENST00000531226 RXRBP28702 533 aa26.43■■□□□ 1.82
PACSIN3-208ENST00000531226 ZC3H6P61129 1189 aaKnown RBP26.43■■□□□ 1.82
PACSIN3-208ENST00000531226 NME9Q86XW9 330 aa26.43■■□□□ 1.82
PACSIN3-208ENST00000531226 NFAT5O94916 1531 aa26.43■■□□□ 1.82
PACSIN3-208ENST00000531226 LTN1O94822 1766 aa26.43■■□□□ 1.82
PACSIN3-208ENST00000531226 CDK12Q9NYV4 1490 aaPredicted RBP26.42■■□□□ 1.82
PACSIN3-208ENST00000531226 RBM6P78332 1123 aaKnown RBP26.42■■□□□ 1.82
PACSIN3-208ENST00000531226 COL18A1P39060 1754 aa26.42■■□□□ 1.82
PACSIN3-208ENST00000531226 GLI3P10071 1580 aa26.41■■□□□ 1.82
PACSIN3-208ENST00000531226 RGPD5Q99666 1765 aa26.41■■□□□ 1.82
PACSIN3-208ENST00000531226 OVOS2A0A0J9YW53 1432 aa26.4■■□□□ 1.82
PACSIN3-208ENST00000531226 OVOS2Q6IE36 1432 aa26.4■■□□□ 1.82
PACSIN3-208ENST00000531226 POLR3GLQ9BT43 218 aa26.4■■□□□ 1.82
PACSIN3-208ENST00000531226 BTG4Q9NY30 223 aa26.4■■□□□ 1.82
PACSIN3-208ENST00000531226 ZRANB1Q9UGI0 708 aa26.4■■□□□ 1.82
PACSIN3-208ENST00000531226 CHRNA2Q15822 529 aa26.39■■□□□ 1.82
PACSIN3-208ENST00000531226 C11orf95C9JLR9 678 aaPredicted RBP26.38■■□□□ 1.81
PACSIN3-208ENST00000531226 KCNH5Q8NCM2 988 aa26.38■■□□□ 1.81
PACSIN3-208ENST00000531226 CAMTA1Q9Y6Y1 1673 aa26.38■■□□□ 1.81
PACSIN3-208ENST00000531226 RGS12O14924 1447 aa26.35■■□□□ 1.81
PACSIN3-208ENST00000531226 VPS72Q15906 364 aa26.35■■□□□ 1.81
PACSIN3-208ENST00000531226 GJD4Q96KN9 370 aaPredicted RBP26.35■■□□□ 1.81
PACSIN3-208ENST00000531226 NSD3Q9BZ95 1437 aa26.35■■□□□ 1.81
PACSIN3-208ENST00000531226 ABCC6O95255 1503 aa26.34■■□□□ 1.81
PACSIN3-208ENST00000531226 ANKRD26Q9UPS8 1709 aa26.34■■□□□ 1.81
PACSIN3-208ENST00000531226 AATKQ6ZMQ8 1374 aa26.33■■□□□ 1.8
PACSIN3-208ENST00000531226 SOX12O15370 315 aa26.32■■□□□ 1.8
PACSIN3-208ENST00000531226 CARD14Q9BXL6 1004 aa26.32■■□□□ 1.8
PACSIN3-208ENST00000531226 KIF7Q2M1P5 1343 aa26.32■■□□□ 1.8
PACSIN3-208ENST00000531226 ARHGEF25Q86VW2 580 aa26.31■■□□□ 1.8
PACSIN3-208ENST00000531226 COL5A2P05997 1499 aaPredicted RBP26.3■■□□□ 1.8
PACSIN3-208ENST00000531226 BRWD3Q6RI45 1802 aa26.3■■□□□ 1.8
PACSIN3-208ENST00000531226 ZBTB7CA1YPR0 619 aa26.3■■□□□ 1.8
PACSIN3-208ENST00000531226 COG3Q96JB2 828 aa26.3■■□□□ 1.8
PACSIN3-208ENST00000531226 FYB1O15117 783 aa26.29■■□□□ 1.8
PACSIN3-208ENST00000531226 CCDC9Q9Y3X0 531 aaKnown RBP26.29■■□□□ 1.8
PACSIN3-208ENST00000531226 STRN4Q9NRL3 753 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms