RNA–Protein interactions for RNA: ENST00000531168.1

MMP8-204, Transcript of matrix metallopeptidase 8, humanhuman

TSL 3

Gene MMP8, Length 528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8-204ENST00000531168 EVC2Q86UK5 1308 aa12.91□□□□□ -0.34
MMP8-204ENST00000531168 CPSF1Q10570 1443 aaKnown RBP12.91□□□□□ -0.34
MMP8-204ENST00000531168 KIF20BQ96Q89 1820 aa12.91□□□□□ -0.34
MMP8-204ENST00000531168 TESK2Q96S53 571 aa12.91□□□□□ -0.34
MMP8-204ENST00000531168 ATAD2Q6PL18 1390 aa12.91□□□□□ -0.34
MMP8-204ENST00000531168 GLI3P10071 1580 aa12.9□□□□□ -0.34
MMP8-204ENST00000531168 WNK3Q9BYP7 1800 aa12.9□□□□□ -0.34
MMP8-204ENST00000531168 COL18A1P39060 1754 aa12.9□□□□□ -0.34
MMP8-204ENST00000531168 NUTM2BA6NNL0 878 aaPredicted RBP12.9□□□□□ -0.34
MMP8-204ENST00000531168 NUTM2EB1AL46 878 aaPredicted RBP12.9□□□□□ -0.34
MMP8-204ENST00000531168 SRPK2P78362 688 aaKnown RBP12.9□□□□□ -0.34
MMP8-204ENST00000531168 POTEAQ6S8J7 498 aa12.9□□□□□ -0.34
MMP8-204ENST00000531168 NUTM2AQ8IVF1 878 aaPredicted RBP12.9□□□□□ -0.34
MMP8-204ENST00000531168 BRD4O60885 1362 aaPredicted RBP12.9□□□□□ -0.34
MMP8-204ENST00000531168 LTN1O94822 1766 aa12.89□□□□□ -0.35
MMP8-204ENST00000531168 RGPD5Q99666 1765 aa12.89□□□□□ -0.35
MMP8-204ENST00000531168 PSME1Q06323 249 aa12.89□□□□□ -0.35
MMP8-204ENST00000531168 BRWD3Q6RI45 1802 aa12.89□□□□□ -0.35
MMP8-204ENST00000531168 BCL9LQ86UU0 1499 aa12.89□□□□□ -0.35
MMP8-204ENST00000531168 CDK12Q9NYV4 1490 aaPredicted RBP12.89□□□□□ -0.35
MMP8-204ENST00000531168 AFF2P51816 1311 aa12.88□□□□□ -0.35
MMP8-204ENST00000531168 ATRNO75882 1429 aa12.88□□□□□ -0.35
MMP8-204ENST00000531168 MEX3CQ5U5Q3 659 aaKnown RBP12.87□□□□□ -0.35
MMP8-204ENST00000531168 NGDNQ8NEJ9 315 aaKnown RBP12.87□□□□□ -0.35
MMP8-204ENST00000531168 USP19O94966 1318 aa12.87□□□□□ -0.35
MMP8-204ENST00000531168 ANKRD26Q9UPS8 1709 aa12.86□□□□□ -0.35
MMP8-204ENST00000531168 ST20-MTHFSA0A0A6YYL1 179 aa12.86□□□□□ -0.35
MMP8-204ENST00000531168 NFAT5O94916 1531 aa12.86□□□□□ -0.35
MMP8-204ENST00000531168 ADAMTS2O95450 1211 aa12.85□□□□□ -0.35
MMP8-204ENST00000531168 FNBP4Q8N3X1 1017 aaPredicted RBP12.85□□□□□ -0.35
MMP8-204ENST00000531168 C8orf37Q96NL8 207 aa12.85□□□□□ -0.35
MMP8-204ENST00000531168 PUS7Q96PZ0 661 aaKnown RBP12.85□□□□□ -0.35
MMP8-204ENST00000531168 CABP1Q9NZU7 370 aa12.85□□□□□ -0.35
MMP8-204ENST00000531168 RGS12O14924 1447 aa12.85□□□□□ -0.35
MMP8-204ENST00000531168 THSD7AQ9UPZ6 1657 aa12.84□□□□□ -0.35
MMP8-204ENST00000531168 ZNF772Q68DY9 489 aaPredicted RBP12.84□□□□□ -0.35
MMP8-204ENST00000531168 CABLES1Q8TDN4 633 aa12.84□□□□□ -0.35
MMP8-204ENST00000531168 ABCC6O95255 1503 aa12.83□□□□□ -0.35
MMP8-204ENST00000531168 A0A1W2PP64 1363 aa12.83□□□□□ -0.36
MMP8-204ENST00000531168 NINLQ9Y2I6 1382 aa12.83□□□□□ -0.36
MMP8-204ENST00000531168 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
MMP8-204ENST00000531168 CPDO75976 1380 aa12.81□□□□□ -0.36
MMP8-204ENST00000531168 KTN1Q86UP2 1357 aaKnown RBP12.81□□□□□ -0.36
MMP8-204ENST00000531168 OVOS2A0A0J9YW53 1432 aa12.8□□□□□ -0.36
MMP8-204ENST00000531168 OVOS2Q6IE36 1432 aa12.8□□□□□ -0.36
MMP8-204ENST00000531168 CAMTA1Q9Y6Y1 1673 aa12.8□□□□□ -0.36
MMP8-204ENST00000531168 NGLY1Q96IV0 654 aa12.8□□□□□ -0.36
MMP8-204ENST00000531168 FAM208AQ9UK61 1670 aaKnown RBP12.8□□□□□ -0.36
MMP8-204ENST00000531168 PAK3O75914 559 aaPredicted RBP12.79□□□□□ -0.36
MMP8-204ENST00000531168 LMOD2Q6P5Q4 547 aa12.79□□□□□ -0.36
MMP8-204ENST00000531168 USP21Q9UK80 565 aa12.79□□□□□ -0.36
MMP8-204ENST00000531168 TTC21BQ7Z4L5 1316 aa12.79□□□□□ -0.36
MMP8-204ENST00000531168 TTC21AQ8NDW8 1320 aa12.79□□□□□ -0.36
MMP8-204ENST00000531168 USP31Q70CQ4 1352 aa12.79□□□□□ -0.36
MMP8-204ENST00000531168 ANKRD36BQ8N2N9 1353 aa12.79□□□□□ -0.36
MMP8-204ENST00000531168 KIAA0232Q92628 1395 aa12.79□□□□□ -0.36
MMP8-204ENST00000531168 PARP4Q9UKK3 1724 aaKnown RBP12.79□□□□□ -0.36
MMP8-204ENST00000531168 SOCS7O14512 581 aa12.78□□□□□ -0.36
MMP8-204ENST00000531168 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
MMP8-204ENST00000531168 SLC24A1O60721 1099 aa12.77□□□□□ -0.37
MMP8-204ENST00000531168 SLC12A5Q9H2X9 1139 aa12.77□□□□□ -0.37
MMP8-204ENST00000531168 FAM83GA6ND36 823 aa12.76□□□□□ -0.37
MMP8-204ENST00000531168 TMF1P82094 1093 aa12.76□□□□□ -0.37
MMP8-204ENST00000531168 NUTM2GQ5VZR2 741 aa12.76□□□□□ -0.37
MMP8-204ENST00000531168 UNC5CLQ8IV45 518 aa12.76□□□□□ -0.37
MMP8-204ENST00000531168 ABTB2Q8N961 1025 aa12.76□□□□□ -0.37
MMP8-204ENST00000531168 TRPC5Q9UL62 973 aaPredicted RBP12.76□□□□□ -0.37
MMP8-204ENST00000531168 COL5A2P05997 1499 aaPredicted RBP12.76□□□□□ -0.37
MMP8-204ENST00000531168 RGPD2P0DJD1 1756 aa12.76□□□□□ -0.37
MMP8-204ENST00000531168 LRRC37A3O60309 1634 aa12.75□□□□□ -0.37
MMP8-204ENST00000531168 HAP1P54257 671 aaPredicted RBP12.75□□□□□ -0.37
MMP8-204ENST00000531168 RBM6P78332 1123 aaKnown RBP12.75□□□□□ -0.37
MMP8-204ENST00000531168 PEAK1Q9H792 1746 aa12.75□□□□□ -0.37
MMP8-204ENST00000531168 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
MMP8-204ENST00000531168 HSPA5P11021 654 aaKnown RBP12.74□□□□□ -0.37
MMP8-204ENST00000531168 RXRBP28702 533 aa12.74□□□□□ -0.37
MMP8-204ENST00000531168 NLRP13Q86W25 1043 aa12.74□□□□□ -0.37
MMP8-204ENST00000531168 QTRT2Q9H974 415 aaKnown RBP12.74□□□□□ -0.37
MMP8-204ENST00000531168 MAP2P11137 1827 aaKnown RBP12.74□□□□□ -0.37
MMP8-204ENST00000531168 TNS1Q9HBL0 1735 aaKnown RBP12.73□□□□□ -0.37
MMP8-204ENST00000531168 GCP02774 474 aa12.72□□□□□ -0.37
MMP8-204ENST00000531168 EIF4G2P78344 907 aaKnown RBP eCLIP12.72□□□□□ -0.37
MMP8-204ENST00000531168 VPS72Q15906 364 aa12.72□□□□□ -0.37
MMP8-204ENST00000531168 HDGFL2Q7Z4V5 671 aaPredicted RBP12.72□□□□□ -0.37
MMP8-204ENST00000531168 TMC1Q8TDI8 760 aa12.72□□□□□ -0.37
MMP8-204ENST00000531168 TERF2IPQ9NYB0 399 aa12.72□□□□□ -0.37
MMP8-204ENST00000531168 AATKQ6ZMQ8 1374 aa12.71□□□□□ -0.37
MMP8-204ENST00000531168 NLRP6P59044 892 aa12.71□□□□□ -0.37
MMP8-204ENST00000531168 NME9Q86XW9 330 aa12.71□□□□□ -0.37
MMP8-204ENST00000531168 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.37
MMP8-204ENST00000531168 PRDM11Q9NQV5 511 aa12.71□□□□□ -0.37
MMP8-204ENST00000531168 BTG4Q9NY30 223 aa12.71□□□□□ -0.37
MMP8-204ENST00000531168 ZRANB1Q9UGI0 708 aa12.71□□□□□ -0.37
MMP8-204ENST00000531168 SBF2Q86WG5 1849 aa12.71□□□□□ -0.38
MMP8-204ENST00000531168 ZC3H6P61129 1189 aaKnown RBP12.7□□□□□ -0.38
MMP8-204ENST00000531168 CHRNA2Q15822 529 aa12.7□□□□□ -0.38
MMP8-204ENST00000531168 CDCA8Q53HL2 280 aa12.7□□□□□ -0.38
MMP8-204ENST00000531168 RGPD1P0DJD0 1748 aa12.7□□□□□ -0.38
MMP8-204ENST00000531168 SHANK3Q9BYB0 1731 aa12.7□□□□□ -0.38
MMP8-204ENST00000531168 SPATA31A5Q5VU36 1347 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms