RNA–Protein interactions for RNA: ENST00000531018.5

SYVN1-213, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-213ENST00000531018 NGDNQ8NEJ9 315 aaKnown RBP13.03□□□□□ -0.32
SYVN1-213ENST00000531018 BRD4O60885 1362 aaPredicted RBP13.03□□□□□ -0.32
SYVN1-213ENST00000531018 USP47Q96K76 1375 aa13.03□□□□□ -0.32
SYVN1-213ENST00000531018 SLC24A1O60721 1099 aa13.02□□□□□ -0.33
SYVN1-213ENST00000531018 CABP1Q9NZU7 370 aa13.02□□□□□ -0.33
SYVN1-213ENST00000531018 ATAD2Q6PL18 1390 aa13.02□□□□□ -0.33
SYVN1-213ENST00000531018 CPSF1Q10570 1443 aaKnown RBP13.02□□□□□ -0.33
SYVN1-213ENST00000531018 CD163L1Q9NR16 1453 aa13□□□□□ -0.33
SYVN1-213ENST00000531018 RGS12O14924 1447 aa13□□□□□ -0.33
SYVN1-213ENST00000531018 USP6P35125 1406 aa13□□□□□ -0.33
SYVN1-213ENST00000531018 FNBP4Q8N3X1 1017 aaPredicted RBP13□□□□□ -0.33
SYVN1-213ENST00000531018 NGLY1Q96IV0 654 aa13□□□□□ -0.33
SYVN1-213ENST00000531018 QTRT2Q9H974 415 aaKnown RBP13□□□□□ -0.33
SYVN1-213ENST00000531018 MON2Q7Z3U7 1717 aa12.99□□□□□ -0.33
SYVN1-213ENST00000531018 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
SYVN1-213ENST00000531018 CDK12Q9NYV4 1490 aaPredicted RBP12.98□□□□□ -0.33
SYVN1-213ENST00000531018 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
SYVN1-213ENST00000531018 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.97□□□□□ -0.33
SYVN1-213ENST00000531018 RBM6P78332 1123 aaKnown RBP12.97□□□□□ -0.33
SYVN1-213ENST00000531018 CABLES1Q8TDN4 633 aa12.97□□□□□ -0.33
SYVN1-213ENST00000531018 PHRF1Q9P1Y6 1649 aaKnown RBP12.97□□□□□ -0.33
SYVN1-213ENST00000531018 SLIT2O94813 1529 aa12.97□□□□□ -0.33
SYVN1-213ENST00000531018 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
SYVN1-213ENST00000531018 NWD2Q9ULI1 1742 aa12.96□□□□□ -0.33
SYVN1-213ENST00000531018 PIK3C2AO00443 1686 aa12.96□□□□□ -0.33
SYVN1-213ENST00000531018 USP54Q70EL1 1684 aa12.96□□□□□ -0.34
SYVN1-213ENST00000531018 NINLQ9Y2I6 1382 aa12.95□□□□□ -0.34
SYVN1-213ENST00000531018 USP19O94966 1318 aa12.95□□□□□ -0.34
SYVN1-213ENST00000531018 USP21Q9UK80 565 aa12.95□□□□□ -0.34
SYVN1-213ENST00000531018 PLCH1Q4KWH8 1693 aa12.94□□□□□ -0.34
SYVN1-213ENST00000531018 PAK3O75914 559 aaPredicted RBP12.94□□□□□ -0.34
SYVN1-213ENST00000531018 LMOD2Q6P5Q4 547 aa12.94□□□□□ -0.34
SYVN1-213ENST00000531018 SLC12A5Q9H2X9 1139 aa12.94□□□□□ -0.34
SYVN1-213ENST00000531018 TTC21BQ7Z4L5 1316 aa12.93□□□□□ -0.34
SYVN1-213ENST00000531018 TMF1P82094 1093 aa12.93□□□□□ -0.34
SYVN1-213ENST00000531018 ABTB2Q8N961 1025 aa12.93□□□□□ -0.34
SYVN1-213ENST00000531018 COL14A1Q05707 1796 aaKnown RBP12.93□□□□□ -0.34
SYVN1-213ENST00000531018 ATRNO75882 1429 aa12.93□□□□□ -0.34
SYVN1-213ENST00000531018 NRAPQ86VF7 1730 aa12.93□□□□□ -0.34
SYVN1-213ENST00000531018 SLIT3O75094 1523 aa12.93□□□□□ -0.34
SYVN1-213ENST00000531018 MYOM1P52179 1685 aa12.93□□□□□ -0.34
SYVN1-213ENST00000531018 TTC21AQ8NDW8 1320 aa12.92□□□□□ -0.34
SYVN1-213ENST00000531018 FAM83GA6ND36 823 aa12.92□□□□□ -0.34
SYVN1-213ENST00000531018 A0A1W2PP64 1363 aa12.92□□□□□ -0.34
SYVN1-213ENST00000531018 KTN1Q86UP2 1357 aaKnown RBP12.92□□□□□ -0.34
SYVN1-213ENST00000531018 EP400Q96L91 3159 aa12.91□□□□□ -0.34
SYVN1-213ENST00000531018 EIF4G2P78344 907 aaKnown RBP eCLIP12.91□□□□□ -0.34
SYVN1-213ENST00000531018 NLRP13Q86W25 1043 aa12.91□□□□□ -0.34
SYVN1-213ENST00000531018 TRPC5Q9UL62 973 aaPredicted RBP12.91□□□□□ -0.34
SYVN1-213ENST00000531018 SRCAPQ6ZRS2 3230 aa12.91□□□□□ -0.34
SYVN1-213ENST00000531018 CPDO75976 1380 aa12.91□□□□□ -0.34
SYVN1-213ENST00000531018 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
SYVN1-213ENST00000531018 EDC4Q6P2E9 1401 aaKnown RBP12.9□□□□□ -0.34
SYVN1-213ENST00000531018 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
SYVN1-213ENST00000531018 HSPA5P11021 654 aaKnown RBP12.9□□□□□ -0.34
SYVN1-213ENST00000531018 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
SYVN1-213ENST00000531018 UNC5CLQ8IV45 518 aa12.9□□□□□ -0.34
SYVN1-213ENST00000531018 TERF2IPQ9NYB0 399 aa12.9□□□□□ -0.34
SYVN1-213ENST00000531018 LMO7Q8WWI1 1683 aa12.89□□□□□ -0.35
SYVN1-213ENST00000531018 GCP02774 474 aa12.89□□□□□ -0.35
SYVN1-213ENST00000531018 NUTM2GQ5VZR2 741 aa12.89□□□□□ -0.35
SYVN1-213ENST00000531018 TMC1Q8TDI8 760 aa12.89□□□□□ -0.35
SYVN1-213ENST00000531018 ANKRD36BQ8N2N9 1353 aa12.89□□□□□ -0.35
SYVN1-213ENST00000531018 COL18A1P39060 1754 aa12.89□□□□□ -0.35
SYVN1-213ENST00000531018 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
SYVN1-213ENST00000531018 KIAA0232Q92628 1395 aa12.88□□□□□ -0.35
SYVN1-213ENST00000531018 NFAT5O94916 1531 aa12.88□□□□□ -0.35
SYVN1-213ENST00000531018 GLI3P10071 1580 aa12.87□□□□□ -0.35
SYVN1-213ENST00000531018 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
SYVN1-213ENST00000531018 NLRP6P59044 892 aa12.87□□□□□ -0.35
SYVN1-213ENST00000531018 VPS72Q15906 364 aa12.86□□□□□ -0.35
SYVN1-213ENST00000531018 OVOS2A0A0J9YW53 1432 aa12.86□□□□□ -0.35
SYVN1-213ENST00000531018 OVOS2Q6IE36 1432 aa12.86□□□□□ -0.35
SYVN1-213ENST00000531018 CAMTA1Q9Y6Y1 1673 aa12.86□□□□□ -0.35
SYVN1-213ENST00000531018 C11orf95C9JLR9 678 aaPredicted RBP12.85□□□□□ -0.35
SYVN1-213ENST00000531018 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
SYVN1-213ENST00000531018 GJD4Q96KN9 370 aaPredicted RBP12.85□□□□□ -0.35
SYVN1-213ENST00000531018 PRDM11Q9NQV5 511 aa12.85□□□□□ -0.35
SYVN1-213ENST00000531018 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
SYVN1-213ENST00000531018 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
SYVN1-213ENST00000531018 ZC3H6P61129 1189 aaKnown RBP12.84□□□□□ -0.35
SYVN1-213ENST00000531018 NME9Q86XW9 330 aa12.84□□□□□ -0.35
SYVN1-213ENST00000531018 CARD14Q9BXL6 1004 aa12.84□□□□□ -0.35
SYVN1-213ENST00000531018 ZRANB1Q9UGI0 708 aa12.84□□□□□ -0.35
SYVN1-213ENST00000531018 ARHGEF25Q86VW2 580 aa12.83□□□□□ -0.36
SYVN1-213ENST00000531018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.83□□□□□ -0.36
SYVN1-213ENST00000531018 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.36
SYVN1-213ENST00000531018 ABCC6O95255 1503 aa12.83□□□□□ -0.36
SYVN1-213ENST00000531018 RGPD5Q99666 1765 aa12.82□□□□□ -0.36
SYVN1-213ENST00000531018 CHRNA2Q15822 529 aa12.82□□□□□ -0.36
SYVN1-213ENST00000531018 LTN1O94822 1766 aa12.81□□□□□ -0.36
SYVN1-213ENST00000531018 KIF20BQ96Q89 1820 aa12.81□□□□□ -0.36
SYVN1-213ENST00000531018 FYB1O15117 783 aa12.81□□□□□ -0.36
SYVN1-213ENST00000531018 SPATA31A5Q5VU36 1347 aa12.81□□□□□ -0.36
SYVN1-213ENST00000531018 SPATA31A7Q8IWB4 1347 aa12.81□□□□□ -0.36
SYVN1-213ENST00000531018 BRWD3Q6RI45 1802 aa12.81□□□□□ -0.36
SYVN1-213ENST00000531018 COL5A2P05997 1499 aaPredicted RBP12.8□□□□□ -0.36
SYVN1-213ENST00000531018 AXIN2Q9Y2T1 843 aa12.79□□□□□ -0.36
SYVN1-213ENST00000531018 SPATA31A1Q5TZJ5 1347 aa12.79□□□□□ -0.36
SYVN1-213ENST00000531018 THSD7AQ9UPZ6 1657 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms