RNA–Protein interactions for RNA: ENST00000530742.5

CLINT1-210, Transcript of clathrin interactor 1, humanhuman

TSL 5 BASIC

Gene CLINT1, Length 3,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-210ENST00000530742 CDK19Q9BWU1 502 aa16.24■□□□□ 0.19
CLINT1-210ENST00000530742 USP54Q70EL1 1684 aa16.23■□□□□ 0.19
CLINT1-210ENST00000530742 C8orf34Q49A92 452 aa16.23■□□□□ 0.19
CLINT1-210ENST00000530742 NUTM2DQ5VT03 806 aaPredicted RBP16.23■□□□□ 0.19
CLINT1-210ENST00000530742 PNNQ9H307 717 aaKnown RBP16.22■□□□□ 0.19
CLINT1-210ENST00000530742 RGPD1P0DJD0 1748 aa16.22■□□□□ 0.19
CLINT1-210ENST00000530742 FAM161AQ3B820 660 aa16.22■□□□□ 0.19
CLINT1-210ENST00000530742 HDGFL2Q7Z4V5 671 aaPredicted RBP16.22■□□□□ 0.19
CLINT1-210ENST00000530742 DLG5Q8TDM6 1919 aa16.22■□□□□ 0.19
CLINT1-210ENST00000530742 CLUAP1Q96AJ1 413 aa16.22■□□□□ 0.19
CLINT1-210ENST00000530742 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.19
CLINT1-210ENST00000530742 TRIM35Q9UPQ4 493 aa16.21■□□□□ 0.19
CLINT1-210ENST00000530742 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.21■□□□□ 0.19
CLINT1-210ENST00000530742 SRPK2P78362 688 aaKnown RBP16.21■□□□□ 0.19
CLINT1-210ENST00000530742 ZBTB47Q9UFB7 747 aaPredicted RBP16.21■□□□□ 0.19
CLINT1-210ENST00000530742 SLIT1O75093 1534 aa16.21■□□□□ 0.18
CLINT1-210ENST00000530742 DIP2AQ14689 1571 aa16.2■□□□□ 0.18
CLINT1-210ENST00000530742 TMPOP42166 694 aaKnown RBP16.19■□□□□ 0.18
CLINT1-210ENST00000530742 DDRGK1Q96HY6 314 aa16.19■□□□□ 0.18
CLINT1-210ENST00000530742 POGKQ9P215 609 aa16.19■□□□□ 0.18
CLINT1-210ENST00000530742 ARHGAP23Q9P227 1491 aa16.19■□□□□ 0.18
CLINT1-210ENST00000530742 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
CLINT1-210ENST00000530742 ADAMTS13Q76LX8 1427 aa16.19■□□□□ 0.18
CLINT1-210ENST00000530742 MAPK8IP3Q9UPT6 1336 aa16.18■□□□□ 0.18
CLINT1-210ENST00000530742 METP08581 1390 aa16.18■□□□□ 0.18
CLINT1-210ENST00000530742 FCHSD2O94868 740 aa16.18■□□□□ 0.18
CLINT1-210ENST00000530742 TMEM2Q9UHN6 1383 aa16.17■□□□□ 0.18
CLINT1-210ENST00000530742 IGHDP01880 384 aa16.17■□□□□ 0.18
CLINT1-210ENST00000530742 STK26Q9P289 416 aa16.17■□□□□ 0.18
CLINT1-210ENST00000530742 PMFBP1Q8TBY8 1022 aa16.17■□□□□ 0.18
CLINT1-210ENST00000530742 TNRQ92752 1358 aa16.16■□□□□ 0.18
CLINT1-210ENST00000530742 U2AF1L5P0DN76 240 aaPredicted RBP16.16■□□□□ 0.18
CLINT1-210ENST00000530742 U2AF1Q01081 240 aaKnown RBP eCLIP16.16■□□□□ 0.18
CLINT1-210ENST00000530742 ZNF428Q96B54 188 aa16.16■□□□□ 0.18
CLINT1-210ENST00000530742 PLEKHG1Q9ULL1 1385 aa16.16■□□□□ 0.18
CLINT1-210ENST00000530742 WASLO00401 505 aaPredicted RBP16.16■□□□□ 0.18
CLINT1-210ENST00000530742 GGNBP2Q9H3C7 697 aa16.16■□□□□ 0.18
CLINT1-210ENST00000530742 CABP1Q9NZU7 370 aa16.15■□□□□ 0.18
CLINT1-210ENST00000530742 DIAPH1O60610 1272 aaKnown RBP16.15■□□□□ 0.18
CLINT1-210ENST00000530742 TNNT2P45379 298 aaPredicted RBP16.15■□□□□ 0.18
CLINT1-210ENST00000530742 HDGFP51858 240 aaKnown RBP16.15■□□□□ 0.18
CLINT1-210ENST00000530742 RSPH6AQ9H0K4 717 aa16.14■□□□□ 0.17
CLINT1-210ENST00000530742 FMN2Q9NZ56 1722 aa16.14■□□□□ 0.17
CLINT1-210ENST00000530742 POLKQ9UBT6 870 aa16.14■□□□□ 0.17
CLINT1-210ENST00000530742 XRN1Q8IZH2 1706 aaKnown RBP16.14■□□□□ 0.17
CLINT1-210ENST00000530742 PIK3R4Q99570 1358 aa16.13■□□□□ 0.17
CLINT1-210ENST00000530742 USP35Q9P2H5 1018 aa16.13■□□□□ 0.17
CLINT1-210ENST00000530742 ALDH1L2Q3SY69 923 aa16.13■□□□□ 0.17
CLINT1-210ENST00000530742 RRP7AQ9Y3A4 280 aaKnown RBP16.13■□□□□ 0.17
CLINT1-210ENST00000530742 SSH2Q76I76 1423 aa16.12■□□□□ 0.17
CLINT1-210ENST00000530742 MVPQ14764 893 aaKnown RBP16.12■□□□□ 0.17
CLINT1-210ENST00000530742 RLBP1P12271 317 aa16.12■□□□□ 0.17
CLINT1-210ENST00000530742 PANK1Q8TE04 598 aa16.12■□□□□ 0.17
CLINT1-210ENST00000530742 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
CLINT1-210ENST00000530742 SAFB2Q14151 953 aaKnown RBP eCLIP16.11■□□□□ 0.17
CLINT1-210ENST00000530742 OVOS2A0A0J9YW53 1432 aa16.1■□□□□ 0.17
CLINT1-210ENST00000530742 OVOS2Q6IE36 1432 aa16.1■□□□□ 0.17
CLINT1-210ENST00000530742 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
CLINT1-210ENST00000530742 COG6Q9Y2V7 657 aa16.1■□□□□ 0.17
CLINT1-210ENST00000530742 PEAK1Q9H792 1746 aa16.1■□□□□ 0.17
CLINT1-210ENST00000530742 HDAC1Q13547 482 aaPredicted RBP16.1■□□□□ 0.17
CLINT1-210ENST00000530742 STAG3Q9UJ98 1225 aa16.1■□□□□ 0.17
CLINT1-210ENST00000530742 USP19O94966 1318 aa16.1■□□□□ 0.17
CLINT1-210ENST00000530742 IL13P35225 146 aa16.09■□□□□ 0.17
CLINT1-210ENST00000530742 SKAP1Q86WV1 359 aa16.09■□□□□ 0.17
CLINT1-210ENST00000530742 FER1L4A9Z1Z3 1794 aa16.09■□□□□ 0.17
CLINT1-210ENST00000530742 MARF1Q9Y4F3 1742 aaKnown RBP16.09■□□□□ 0.17
CLINT1-210ENST00000530742 ZNF692Q9BU19 519 aaPredicted RBP16.09■□□□□ 0.17
CLINT1-210ENST00000530742 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
CLINT1-210ENST00000530742 PCDHB15Q9Y5E8 787 aa16.09■□□□□ 0.17
CLINT1-210ENST00000530742 USP31Q70CQ4 1352 aa16.08■□□□□ 0.17
CLINT1-210ENST00000530742 ZNF853P0CG23 659 aa16.08■□□□□ 0.17
CLINT1-210ENST00000530742 CCDC61Q9Y6R9 512 aa16.07■□□□□ 0.16
CLINT1-210ENST00000530742 DZIP1LQ8IYY4 767 aaKnown RBP16.06■□□□□ 0.16
CLINT1-210ENST00000530742 ROBO2Q9HCK4 1378 aa16.06■□□□□ 0.16
CLINT1-210ENST00000530742 PLEKHG3A1L390 1219 aa16.06■□□□□ 0.16
CLINT1-210ENST00000530742 PPM1GO15355 546 aaPredicted RBP16.06■□□□□ 0.16
CLINT1-210ENST00000530742 ARHGAP45Q92619 1136 aa16.06■□□□□ 0.16
CLINT1-210ENST00000530742 RWDD1Q9H446 243 aaPredicted RBP16.06■□□□□ 0.16
CLINT1-210ENST00000530742 KIF16BQ96L93 1317 aa16.06■□□□□ 0.16
CLINT1-210ENST00000530742 NEUROD2Q15784 382 aa16.06■□□□□ 0.16
CLINT1-210ENST00000530742 NFE2L2Q16236 605 aa16.06■□□□□ 0.16
CLINT1-210ENST00000530742 EXOSC9Q06265 439 aaKnown RBP16.05■□□□□ 0.16
CLINT1-210ENST00000530742 NUDT16Q96DE0 195 aaKnown RBP16.05■□□□□ 0.16
CLINT1-210ENST00000530742 RIPK4P57078 832 aa16.05■□□□□ 0.16
CLINT1-210ENST00000530742 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
CLINT1-210ENST00000530742 KIF24Q5T7B8 1368 aa16.05■□□□□ 0.16
CLINT1-210ENST00000530742 ATF7IPQ6VMQ6 1270 aa16.04■□□□□ 0.16
CLINT1-210ENST00000530742 CANXP27824 592 aaKnown RBP16.04■□□□□ 0.16
CLINT1-210ENST00000530742 PTPRUQ92729 1446 aa16.04■□□□□ 0.16
CLINT1-210ENST00000530742 LRRC37A3O60309 1634 aa16.04■□□□□ 0.16
CLINT1-210ENST00000530742 SSH1Q8WYL5 1049 aa16.04■□□□□ 0.16
CLINT1-210ENST00000530742 PRR36Q9H6K5 1346 aa16.04■□□□□ 0.16
CLINT1-210ENST00000530742 DDX19BQ9UMR2 479 aa16.04■□□□□ 0.16
CLINT1-210ENST00000530742 TRIM27P14373 513 aa16.03■□□□□ 0.16
CLINT1-210ENST00000530742 IFT57Q9NWB7 429 aa16.03■□□□□ 0.16
CLINT1-210ENST00000530742 USP6P35125 1406 aa16.03■□□□□ 0.16
CLINT1-210ENST00000530742 TNNQ9UQP3 1299 aa16.03■□□□□ 0.16
CLINT1-210ENST00000530742 N4BP2Q86UW6 1770 aaPredicted RBP16.03■□□□□ 0.16
CLINT1-210ENST00000530742 U2SURPO15042 1029 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms