RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 ABTB2Q8N961 1025 aa11.52□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 CERKQ8TCT0 537 aa11.52□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 DDX17Q92841 729 aaKnown RBP11.52□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 COG3Q96JB2 828 aa11.52□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 TTC21AQ8NDW8 1320 aa11.52□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 NSD2O96028 1365 aa11.52□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 PIP4K2BP78356 416 aa11.51□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 NUTM2GQ5VZR2 741 aa11.51□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 TOPAZ1Q8N9V7 1692 aa11.51□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 NPHP3Q7Z494 1330 aa11.51□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 MYBBP1AQ9BQG0 1328 aaKnown RBP11.51□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 SCAF1Q9H7N4 1312 aaKnown RBP11.51□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 BRD4O60885 1362 aaPredicted RBP11.51□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 CCER2I3L3R5 266 aa11.5□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 PLEKHG5O94827 1062 aa11.5□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 NLRP6P59044 892 aa11.5□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 XIRP1Q702N8 1843 aaKnown RBP11.5□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 PARD3Q8TEW0 1356 aa11.5□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 ITSN1Q15811 1721 aa11.49□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 PPP2R1AP30153 589 aa11.49□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 SSH2Q76I76 1423 aa11.49□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 SOX12O15370 315 aa11.48□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 MRS2Q9HD23 443 aa11.48□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 RGPD8O14715 1765 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 NLRP13Q86W25 1043 aa11.47□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 FBLN1P23142 703 aa11.46□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 CCDC184Q52MB2 194 aa11.46□□□□□ -0.57
NEDD8-MDP1-201ENST00000530579 KIF1AQ12756 1690 aa11.46□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 SBNO1A3KN83 1393 aa11.45□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 USP31Q70CQ4 1352 aa11.45□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 PPM1GO15355 546 aaPredicted RBP11.45□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 MTHFSP49914 203 aa11.45□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 AKAP12Q02952 1782 aa11.44□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 SOS2Q07890 1332 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 SPATA31A3Q5VYP0 1347 aa11.44□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 CFAP53Q96M91 514 aa11.44□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 IQSEC2Q5JU85 1478 aa11.44□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 MON2Q7Z3U7 1717 aa11.43□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 ZBTB7CA1YPR0 619 aa11.43□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 RRS1Q15050 365 aaKnown RBP11.42□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 FAM9BQ8IZU0 186 aa11.42□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 KCNH5Q8NCM2 988 aa11.42□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 LRRC59Q96AG4 307 aaKnown RBP11.42□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 POLKQ9UBT6 870 aa11.42□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 PXDNQ92626 1479 aa11.42□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 OVOS2A0A0J9YW53 1432 aa11.42□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 OVOS2Q6IE36 1432 aa11.42□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 ARHGEF10O15013 1369 aa11.41□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 GCP02774 474 aa11.41□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 AMPHP49418 695 aa11.41□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 HAP1P54257 671 aaPredicted RBP11.41□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 CABLES1Q8TDN4 633 aa11.41□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 EMILIN1Q9Y6C2 1016 aa11.41□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 TNS3Q68CZ2 1445 aa11.41□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 NRKQ7Z2Y5 1582 aa11.41□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 AATKQ6ZMQ8 1374 aa11.41□□□□□ -0.58
NEDD8-MDP1-201ENST00000530579 WDR43Q15061 677 aaKnown RBP eCLIP11.39□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 PNISRQ8TF01 805 aaKnown RBP11.39□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 ROBO1Q9Y6N7 1651 aa11.39□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 MAP3K19Q56UN5 1328 aa11.38□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 KIF20BQ96Q89 1820 aa11.38□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 ZC3H6P61129 1189 aaKnown RBP11.38□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 NUDCQ9Y266 331 aa11.38□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 PIK3C2AO00443 1686 aa11.38□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 USP19O94966 1318 aa11.37□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 DIAPH1O60610 1272 aaKnown RBP11.37□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 YTHDC1Q96MU7 727 aaKnown RBP11.37□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 U2SURPO15042 1029 aaKnown RBP11.36□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 HSP90AB2PQ58FF8 381 aa11.36□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 TRPM3Q9HCF6 1732 aaPredicted RBP11.35□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 ARHGEF25Q86VW2 580 aa11.35□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 LTV1Q96GA3 475 aaPredicted RBP11.35□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 AHDC1Q5TGY3 1603 aaPredicted RBP11.35□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 NUTM2BA6NNL0 878 aaPredicted RBP11.34□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 NUTM2EB1AL46 878 aaPredicted RBP11.34□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 U2AF1L5P0DN76 240 aaPredicted RBP11.34□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 HOXC9P31274 260 aa11.34□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 HSPA1LP34931 641 aa11.34□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 U2AF1Q01081 240 aaKnown RBP eCLIP11.34□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 NUTM2AQ8IVF1 878 aaPredicted RBP11.34□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 IP6K1Q92551 441 aa11.34□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 ADAMTS8Q9UP79 889 aa11.34□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 ANKRD26Q9UPS8 1709 aa11.34□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 NHSL1Q5SYE7 1610 aa11.34□□□□□ -0.59
NEDD8-MDP1-201ENST00000530579 FLT4P35916 1363 aa11.33□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 PNPLA6Q8IY17 1366 aa11.33□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 EIF4A2Q14240 407 aaKnown RBP11.33□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 CHRNA2Q15822 529 aa11.33□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 PRDM11Q9NQV5 511 aa11.33□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 INSRP06213 1382 aa11.32□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 KIF24Q5T7B8 1368 aa11.32□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 SLIT3O75094 1523 aa11.32□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 IL13P35225 146 aa11.32□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 ALS2Q96Q42 1657 aa11.32□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 SMG6Q86US8 1419 aaKnown RBP11.32□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 MED1Q15648 1581 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 CDK12Q9NYV4 1490 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 KIAA0232Q92628 1395 aa11.31□□□□□ -0.6
NEDD8-MDP1-201ENST00000530579 ADAMTS2O95450 1211 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms