RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CANXP27824 592 aaKnown RBP14.92□□□□□ -0.02
USP35-207ENST00000530546 LAS1LQ9Y4W2 734 aaKnown RBP14.92□□□□□ -0.02
USP35-207ENST00000530546 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
USP35-207ENST00000530546 NUTM2FA1L443 756 aa14.91□□□□□ -0.02
USP35-207ENST00000530546 BRPF3Q9ULD4 1205 aa14.91□□□□□ -0.02
USP35-207ENST00000530546 FRAT1Q92837 279 aaPredicted RBP14.91□□□□□ -0.02
USP35-207ENST00000530546 MS4A1P11836 297 aa14.9□□□□□ -0.02
USP35-207ENST00000530546 NUDT16Q96DE0 195 aaKnown RBP14.9□□□□□ -0.02
USP35-207ENST00000530546 ZRANB1Q9UGI0 708 aa14.9□□□□□ -0.02
USP35-207ENST00000530546 TMEM2Q9UHN6 1383 aa14.9□□□□□ -0.02
USP35-207ENST00000530546 SLC26A8Q96RN1 970 aa14.9□□□□□ -0.02
USP35-207ENST00000530546 BCL2L13Q9BXK5 485 aa14.9□□□□□ -0.02
USP35-207ENST00000530546 DIAPH1O60610 1272 aaKnown RBP14.89□□□□□ -0.03
USP35-207ENST00000530546 LTKP29376 864 aa14.89□□□□□ -0.03
USP35-207ENST00000530546 DLC1Q96QB1 1528 aa14.89□□□□□ -0.03
USP35-207ENST00000530546 NME9Q86XW9 330 aa14.89□□□□□ -0.03
USP35-207ENST00000530546 MAPK8IP3Q9UPT6 1336 aa14.89□□□□□ -0.03
USP35-207ENST00000530546 IQSEC2Q5JU85 1478 aa14.89□□□□□ -0.03
USP35-207ENST00000530546 NLRP1Q9C000 1473 aa14.89□□□□□ -0.03
USP35-207ENST00000530546 WDR63Q8IWG1 891 aa14.88□□□□□ -0.03
USP35-207ENST00000530546 DDRGK1Q96HY6 314 aa14.88□□□□□ -0.03
USP35-207ENST00000530546 NRXN3Q9Y4C0 1643 aa14.88□□□□□ -0.03
USP35-207ENST00000530546 PPIP5K1Q6PFW1 1433 aa14.88□□□□□ -0.03
USP35-207ENST00000530546 SETD1AO15047 1707 aaKnown RBP14.87□□□□□ -0.03
USP35-207ENST00000530546 NPM2Q86SE8 214 aaKnown RBP14.87□□□□□ -0.03
USP35-207ENST00000530546 PANK1Q8TE04 598 aa14.87□□□□□ -0.03
USP35-207ENST00000530546 PHF23Q9BUL5 403 aaPredicted RBP14.87□□□□□ -0.03
USP35-207ENST00000530546 PDE4AP27815 886 aa14.87□□□□□ -0.03
USP35-207ENST00000530546 BACH2Q9BYV9 841 aa14.87□□□□□ -0.03
USP35-207ENST00000530546 PLEKHG5O94827 1062 aa14.86□□□□□ -0.03
USP35-207ENST00000530546 TSR2Q969E8 191 aaKnown RBP14.86□□□□□ -0.03
USP35-207ENST00000530546 TMPOP42166 694 aaKnown RBP14.86□□□□□ -0.03
USP35-207ENST00000530546 POLKQ9UBT6 870 aa14.86□□□□□ -0.03
USP35-207ENST00000530546 CCDC61Q9Y6R9 512 aa14.86□□□□□ -0.03
USP35-207ENST00000530546 FAM43AQ8N2R8 423 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 PLEKHF1Q96S99 279 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 COG6Q9Y2V7 657 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 ROBO2Q9HCK4 1378 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 CCDC27Q2M243 656 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 EMILIN1Q9Y6C2 1016 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 RARSP54136 660 aaKnown RBP14.85□□□□□ -0.03
USP35-207ENST00000530546 PKNOX2Q96KN3 472 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 MYH16Q9H6N6 1097 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 HMOX1P09601 288 aa14.84□□□□□ -0.03
USP35-207ENST00000530546 RIPK4P57078 832 aa14.84□□□□□ -0.03
USP35-207ENST00000530546 TNNQ9UQP3 1299 aa14.84□□□□□ -0.03
USP35-207ENST00000530546 EID1Q9Y6B2 187 aa14.84□□□□□ -0.03
USP35-207ENST00000530546 MED14O60244 1454 aa14.84□□□□□ -0.03
USP35-207ENST00000530546 COL3A1P02461 1466 aaPredicted RBP14.84□□□□□ -0.03
USP35-207ENST00000530546 ATP7BP35670 1465 aa14.84□□□□□ -0.03
USP35-207ENST00000530546 PRR36Q9H6K5 1346 aa14.83□□□□□ -0.03
USP35-207ENST00000530546 CENPQQ7L2Z9 268 aaPredicted RBP14.82□□□□□ -0.04
USP35-207ENST00000530546 TRIM35Q9UPQ4 493 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 KDM2BQ8NHM5 1336 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 ADAMTS13Q76LX8 1427 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 RRS1Q15050 365 aaKnown RBP14.82□□□□□ -0.04
USP35-207ENST00000530546 CLUAP1Q96AJ1 413 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 PRKAR2BP31323 418 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 COG3Q96JB2 828 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 UBR1Q8IWV7 1749 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 FAM135BQ49AJ0 1406 aa14.81□□□□□ -0.04
USP35-207ENST00000530546 GLIPR1L2Q4G1C9 344 aa14.81□□□□□ -0.04
USP35-207ENST00000530546 SIRT1Q96EB6 747 aa14.81□□□□□ -0.04
USP35-207ENST00000530546 CPSF1Q10570 1443 aaKnown RBP14.81□□□□□ -0.04
USP35-207ENST00000530546 EDC4Q6P2E9 1401 aaKnown RBP14.81□□□□□ -0.04
USP35-207ENST00000530546 EXOSC9Q06265 439 aaKnown RBP14.8□□□□□ -0.04
USP35-207ENST00000530546 PDE3AQ14432 1141 aa14.8□□□□□ -0.04
USP35-207ENST00000530546 NFKBIBQ15653 356 aa14.8□□□□□ -0.04
USP35-207ENST00000530546 ANKRD26Q9UPS8 1709 aa14.8□□□□□ -0.04
USP35-207ENST00000530546 PNPLA6Q8IY17 1366 aa14.8□□□□□ -0.04
USP35-207ENST00000530546 RGS3P49796 1198 aa14.79□□□□□ -0.04
USP35-207ENST00000530546 KIF20BQ96Q89 1820 aa14.79□□□□□ -0.04
USP35-207ENST00000530546 PLEKHG1Q9ULL1 1385 aa14.79□□□□□ -0.04
USP35-207ENST00000530546 TECPR2O15040 1411 aa14.79□□□□□ -0.04
USP35-207ENST00000530546 SOX12O15370 315 aa14.79□□□□□ -0.04
USP35-207ENST00000530546 AMOTL2Q9Y2J4 779 aa14.79□□□□□ -0.04
USP35-207ENST00000530546 RLBP1P12271 317 aa14.78□□□□□ -0.04
USP35-207ENST00000530546 PNNQ9H307 717 aaKnown RBP14.78□□□□□ -0.04
USP35-207ENST00000530546 FCHSD2O94868 740 aa14.78□□□□□ -0.04
USP35-207ENST00000530546 CPS1P31327 1500 aa14.78□□□□□ -0.04
USP35-207ENST00000530546 PHACTR3Q96KR7 559 aa14.77□□□□□ -0.04
USP35-207ENST00000530546 ADGRB2O60241 1585 aa14.77□□□□□ -0.05
USP35-207ENST00000530546 IGHDP01880 384 aa14.77□□□□□ -0.05
USP35-207ENST00000530546 ACEP12821 1306 aa14.77□□□□□ -0.05
USP35-207ENST00000530546 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
USP35-207ENST00000530546 THUMPD2Q9BTF0 503 aaKnown RBP14.76□□□□□ -0.05
USP35-207ENST00000530546 ZNF692Q9BU19 519 aaPredicted RBP14.76□□□□□ -0.05
USP35-207ENST00000530546 SMC4Q9NTJ3 1288 aa14.76□□□□□ -0.05
USP35-207ENST00000530546 PTPRUQ92729 1446 aa14.76□□□□□ -0.05
USP35-207ENST00000530546 IL13P35225 146 aa14.75□□□□□ -0.05
USP35-207ENST00000530546 NCBP3Q53F19 620 aaKnown RBP14.75□□□□□ -0.05
USP35-207ENST00000530546 THEMISQ8N1K5 641 aaPredicted RBP14.75□□□□□ -0.05
USP35-207ENST00000530546 CDC42BPGQ6DT37 1551 aa14.74□□□□□ -0.05
USP35-207ENST00000530546 TTC21BQ7Z4L5 1316 aa14.74□□□□□ -0.05
USP35-207ENST00000530546 LRRC7Q96NW7 1537 aa14.73□□□□□ -0.05
USP35-207ENST00000530546 KNDC1Q76NI1 1749 aa14.73□□□□□ -0.05
USP35-207ENST00000530546 FTSJ3Q8IY81 847 aaKnown RBP14.73□□□□□ -0.05
USP35-207ENST00000530546 SSH1Q8WYL5 1049 aa14.73□□□□□ -0.05
USP35-207ENST00000530546 C3P01024 1663 aa14.73□□□□□ -0.05
USP35-207ENST00000530546 ZKSCAN2Q63HK3 967 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms