RNA–Protein interactions for RNA: ENST00000530302.1

CLINT1-209, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-209ENST00000530302 ABCB7O75027 752 aa10.42□□□□□ -0.74
CLINT1-209ENST00000530302 ADAMTS2O95450 1211 aa10.42□□□□□ -0.74
CLINT1-209ENST00000530302 SRPK2P78362 688 aaKnown RBP10.42□□□□□ -0.74
CLINT1-209ENST00000530302 MEX3CQ5U5Q3 659 aaKnown RBP10.42□□□□□ -0.74
CLINT1-209ENST00000530302 RBM42Q9BTD8 480 aaKnown RBP10.42□□□□□ -0.74
CLINT1-209ENST00000530302 SBNO2Q9Y2G9 1366 aa10.41□□□□□ -0.74
CLINT1-209ENST00000530302 PLEKHG5O94827 1062 aa10.41□□□□□ -0.74
CLINT1-209ENST00000530302 PSME1Q06323 249 aa10.41□□□□□ -0.74
CLINT1-209ENST00000530302 CABLES1Q8TDN4 633 aa10.41□□□□□ -0.74
CLINT1-209ENST00000530302 C8orf37Q96NL8 207 aa10.41□□□□□ -0.74
CLINT1-209ENST00000530302 CCDC61Q9Y6R9 512 aa10.41□□□□□ -0.74
CLINT1-209ENST00000530302 AKAP12Q02952 1782 aa10.41□□□□□ -0.74
CLINT1-209ENST00000530302 ACEP12821 1306 aa10.4□□□□□ -0.74
CLINT1-209ENST00000530302 AFF2P51816 1311 aa10.4□□□□□ -0.74
CLINT1-209ENST00000530302 PLEKHG3A1L390 1219 aa10.4□□□□□ -0.74
CLINT1-209ENST00000530302 NGDNQ8NEJ9 315 aaKnown RBP10.4□□□□□ -0.74
CLINT1-209ENST00000530302 TESK2Q96S53 571 aa10.4□□□□□ -0.74
CLINT1-209ENST00000530302 PHRF1Q9P1Y6 1649 aaKnown RBP10.4□□□□□ -0.75
CLINT1-209ENST00000530302 USP47Q96K76 1375 aa10.39□□□□□ -0.75
CLINT1-209ENST00000530302 NRKQ7Z2Y5 1582 aa10.39□□□□□ -0.75
CLINT1-209ENST00000530302 EVC2Q86UK5 1308 aa10.39□□□□□ -0.75
CLINT1-209ENST00000530302 PLCH1Q4KWH8 1693 aa10.39□□□□□ -0.75
CLINT1-209ENST00000530302 ST20-MTHFSA0A0A6YYL1 179 aa10.39□□□□□ -0.75
CLINT1-209ENST00000530302 LMOD2Q6P5Q4 547 aa10.39□□□□□ -0.75
CLINT1-209ENST00000530302 ARHGEF10O15013 1369 aa10.39□□□□□ -0.75
CLINT1-209ENST00000530302 CD163L1Q9NR16 1453 aa10.38□□□□□ -0.75
CLINT1-209ENST00000530302 CABP1Q9NZU7 370 aa10.38□□□□□ -0.75
CLINT1-209ENST00000530302 TIMELESSQ9UNS1 1208 aa10.38□□□□□ -0.75
CLINT1-209ENST00000530302 MON2Q7Z3U7 1717 aa10.38□□□□□ -0.75
CLINT1-209ENST00000530302 PIK3C2AO00443 1686 aa10.38□□□□□ -0.75
CLINT1-209ENST00000530302 USP6P35125 1406 aa10.37□□□□□ -0.75
CLINT1-209ENST00000530302 BCL9LQ86UU0 1499 aa10.36□□□□□ -0.75
CLINT1-209ENST00000530302 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.36□□□□□ -0.75
CLINT1-209ENST00000530302 SSH2Q76I76 1423 aa10.36□□□□□ -0.75
CLINT1-209ENST00000530302 PAK3O75914 559 aaPredicted RBP10.36□□□□□ -0.75
CLINT1-209ENST00000530302 NUTM2GQ5VZR2 741 aa10.36□□□□□ -0.75
CLINT1-209ENST00000530302 SLIT2O94813 1529 aa10.36□□□□□ -0.75
CLINT1-209ENST00000530302 ATAD2Q6PL18 1390 aa10.36□□□□□ -0.75
CLINT1-209ENST00000530302 NRAPQ86VF7 1730 aa10.36□□□□□ -0.75
CLINT1-209ENST00000530302 CPSF1Q10570 1443 aaKnown RBP10.35□□□□□ -0.75
CLINT1-209ENST00000530302 NGLY1Q96IV0 654 aa10.35□□□□□ -0.75
CLINT1-209ENST00000530302 ZNF772Q68DY9 489 aaPredicted RBP10.34□□□□□ -0.75
CLINT1-209ENST00000530302 FNBP4Q8N3X1 1017 aaPredicted RBP10.34□□□□□ -0.75
CLINT1-209ENST00000530302 MYOM1P52179 1685 aa10.34□□□□□ -0.75
CLINT1-209ENST00000530302 ATRNO75882 1429 aa10.33□□□□□ -0.76
CLINT1-209ENST00000530302 NWD2Q9ULI1 1742 aa10.33□□□□□ -0.76
CLINT1-209ENST00000530302 USP21Q9UK80 565 aa10.33□□□□□ -0.76
CLINT1-209ENST00000530302 COL14A1Q05707 1796 aaKnown RBP10.33□□□□□ -0.76
CLINT1-209ENST00000530302 RGS12O14924 1447 aa10.33□□□□□ -0.76
CLINT1-209ENST00000530302 USP19O94966 1318 aa10.33□□□□□ -0.76
CLINT1-209ENST00000530302 GLI3P10071 1580 aa10.32□□□□□ -0.76
CLINT1-209ENST00000530302 A0A1W2PP64 1363 aa10.32□□□□□ -0.76
CLINT1-209ENST00000530302 FAM83GA6ND36 823 aa10.32□□□□□ -0.76
CLINT1-209ENST00000530302 SOCS7O14512 581 aa10.32□□□□□ -0.76
CLINT1-209ENST00000530302 HAP1P54257 671 aaPredicted RBP10.32□□□□□ -0.76
CLINT1-209ENST00000530302 SLC12A5Q9H2X9 1139 aa10.32□□□□□ -0.76
CLINT1-209ENST00000530302 SLIT3O75094 1523 aa10.32□□□□□ -0.76
CLINT1-209ENST00000530302 KIAA0232Q92628 1395 aa10.31□□□□□ -0.76
CLINT1-209ENST00000530302 ABTB2Q8N961 1025 aa10.31□□□□□ -0.76
CLINT1-209ENST00000530302 QTRT2Q9H974 415 aaKnown RBP10.31□□□□□ -0.76
CLINT1-209ENST00000530302 USP54Q70EL1 1684 aa10.31□□□□□ -0.76
CLINT1-209ENST00000530302 LMO7Q8WWI1 1683 aa10.31□□□□□ -0.76
CLINT1-209ENST00000530302 KTN1Q86UP2 1357 aaKnown RBP10.3□□□□□ -0.76
CLINT1-209ENST00000530302 TMC1Q8TDI8 760 aa10.3□□□□□ -0.76
CLINT1-209ENST00000530302 ZRANB1Q9UGI0 708 aa10.3□□□□□ -0.76
CLINT1-209ENST00000530302 TTC21BQ7Z4L5 1316 aa10.3□□□□□ -0.76
CLINT1-209ENST00000530302 CDK12Q9NYV4 1490 aaPredicted RBP10.3□□□□□ -0.76
CLINT1-209ENST00000530302 BRD4O60885 1362 aaPredicted RBP10.29□□□□□ -0.76
CLINT1-209ENST00000530302 RXRBP28702 533 aa10.29□□□□□ -0.76
CLINT1-209ENST00000530302 CHRNA2Q15822 529 aa10.29□□□□□ -0.76
CLINT1-209ENST00000530302 ZNF219Q9P2Y4 722 aaPredicted RBP10.29□□□□□ -0.76
CLINT1-209ENST00000530302 COL18A1P39060 1754 aa10.29□□□□□ -0.76
CLINT1-209ENST00000530302 EP400Q96L91 3159 aa10.28□□□□□ -0.76
CLINT1-209ENST00000530302 NFAT5O94916 1531 aa10.28□□□□□ -0.76
CLINT1-209ENST00000530302 HSPA5P11021 654 aaKnown RBP10.28□□□□□ -0.76
CLINT1-209ENST00000530302 ZC3H6P61129 1189 aaKnown RBP10.28□□□□□ -0.76
CLINT1-209ENST00000530302 NME9Q86XW9 330 aa10.28□□□□□ -0.76
CLINT1-209ENST00000530302 UNC5CLQ8IV45 518 aa10.28□□□□□ -0.76
CLINT1-209ENST00000530302 PUS7Q96PZ0 661 aaKnown RBP10.28□□□□□ -0.76
CLINT1-209ENST00000530302 PRDM11Q9NQV5 511 aa10.28□□□□□ -0.76
CLINT1-209ENST00000530302 TRPC5Q9UL62 973 aaPredicted RBP10.28□□□□□ -0.76
CLINT1-209ENST00000530302 BRWD3Q6RI45 1802 aa10.28□□□□□ -0.76
CLINT1-209ENST00000530302 CAMTA1Q9Y6Y1 1673 aa10.28□□□□□ -0.76
CLINT1-209ENST00000530302 RGPD5Q99666 1765 aa10.27□□□□□ -0.77
CLINT1-209ENST00000530302 EDC4Q6P2E9 1401 aaKnown RBP10.27□□□□□ -0.77
CLINT1-209ENST00000530302 NLRP6P59044 892 aa10.27□□□□□ -0.77
CLINT1-209ENST00000530302 RBM6P78332 1123 aaKnown RBP10.27□□□□□ -0.77
CLINT1-209ENST00000530302 TMF1P82094 1093 aa10.27□□□□□ -0.77
CLINT1-209ENST00000530302 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLINT1-209ENST00000530302 BTG4Q9NY30 223 aa10.27□□□□□ -0.77
CLINT1-209ENST00000530302 CPDO75976 1380 aa10.26□□□□□ -0.77
CLINT1-209ENST00000530302 NPM3O75607 178 aaKnown RBP10.26□□□□□ -0.77
CLINT1-209ENST00000530302 GCP02774 474 aa10.26□□□□□ -0.77
CLINT1-209ENST00000530302 NLRP13Q86W25 1043 aa10.26□□□□□ -0.77
CLINT1-209ENST00000530302 ZNF692Q9BU19 519 aaPredicted RBP10.26□□□□□ -0.77
CLINT1-209ENST00000530302 TTC21AQ8NDW8 1320 aa10.26□□□□□ -0.77
CLINT1-209ENST00000530302 LTN1O94822 1766 aa10.26□□□□□ -0.77
CLINT1-209ENST00000530302 ANKRD36BQ8N2N9 1353 aa10.26□□□□□ -0.77
CLINT1-209ENST00000530302 NINLQ9Y2I6 1382 aa10.26□□□□□ -0.77
CLINT1-209ENST00000530302 OVOS2A0A0J9YW53 1432 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms