RNA–Protein interactions for RNA: ENST00000530167.1

H2AFX-202, Transcript of H2A histone family member X, humanhuman

APPRIS P1 BASIC

Gene H2AFX, Length 1,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-202ENST00000530167 SSH2Q76I76 1423 aa28.96■■■□□ 2.23
H2AFX-202ENST00000530167 NRKQ7Z2Y5 1582 aa28.96■■■□□ 2.23
H2AFX-202ENST00000530167 BRD4O60885 1362 aaPredicted RBP28.96■■■□□ 2.23
H2AFX-202ENST00000530167 COL16A1Q07092 1604 aaPredicted RBP28.95■■■□□ 2.23
H2AFX-202ENST00000530167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.95■■■□□ 2.23
H2AFX-202ENST00000530167 NSD3Q9BZ95 1437 aa28.95■■■□□ 2.23
H2AFX-202ENST00000530167 SBNO1A3KN83 1393 aa28.95■■■□□ 2.22
H2AFX-202ENST00000530167 TTC21BQ7Z4L5 1316 aa28.95■■■□□ 2.22
H2AFX-202ENST00000530167 HSPA1LP34931 641 aa28.94■■■□□ 2.22
H2AFX-202ENST00000530167 LRRC59Q96AG4 307 aaKnown RBP28.93■■■□□ 2.22
H2AFX-202ENST00000530167 LMOD2Q6P5Q4 547 aa28.92■■■□□ 2.22
H2AFX-202ENST00000530167 SPATA31A3Q5VYP0 1347 aa28.92■■■□□ 2.22
H2AFX-202ENST00000530167 TNS3Q68CZ2 1445 aa28.92■■■□□ 2.22
H2AFX-202ENST00000530167 TTC21AQ8NDW8 1320 aa28.91■■■□□ 2.22
H2AFX-202ENST00000530167 ABTB2Q8N961 1025 aa28.89■■■□□ 2.22
H2AFX-202ENST00000530167 KNSTRNQ9Y448 316 aa28.89■■■□□ 2.22
H2AFX-202ENST00000530167 ALS2Q96Q42 1657 aa28.88■■■□□ 2.21
H2AFX-202ENST00000530167 PER1O15534 1290 aaPredicted RBP28.87■■■□□ 2.21
H2AFX-202ENST00000530167 NME9Q86XW9 330 aa28.87■■■□□ 2.21
H2AFX-202ENST00000530167 NUTM2GQ5VZR2 741 aa28.86■■■□□ 2.21
H2AFX-202ENST00000530167 CGNL1Q0VF96 1302 aa28.86■■■□□ 2.21
H2AFX-202ENST00000530167 PIK3C2AO00443 1686 aa28.85■■■□□ 2.21
H2AFX-202ENST00000530167 ARHGEF10O15013 1369 aa28.85■■■□□ 2.21
H2AFX-202ENST00000530167 FYB1O15117 783 aa28.83■■■□□ 2.21
H2AFX-202ENST00000530167 NLRP6P59044 892 aa28.83■■■□□ 2.21
H2AFX-202ENST00000530167 KIF20BQ96Q89 1820 aa28.82■■■□□ 2.2
H2AFX-202ENST00000530167 ZRANB1Q9UGI0 708 aa28.82■■■□□ 2.2
H2AFX-202ENST00000530167 PLEKHG5O94827 1062 aa28.81■■■□□ 2.2
H2AFX-202ENST00000530167 PNPLA6Q8IY17 1366 aa28.81■■■□□ 2.2
H2AFX-202ENST00000530167 GGNBP2Q9H3C7 697 aa28.81■■■□□ 2.2
H2AFX-202ENST00000530167 JCADQ9P266 1359 aa28.8■■■□□ 2.2
H2AFX-202ENST00000530167 NLRP13Q86W25 1043 aa28.8■■■□□ 2.2
H2AFX-202ENST00000530167 AMER1Q5JTC6 1135 aaPredicted RBP28.78■■■□□ 2.2
H2AFX-202ENST00000530167 USP31Q70CQ4 1352 aa28.77■■■□□ 2.2
H2AFX-202ENST00000530167 SHPRHQ149N8 1683 aa28.77■■■□□ 2.2
H2AFX-202ENST00000530167 COG3Q96JB2 828 aa28.76■■■□□ 2.2
H2AFX-202ENST00000530167 CNGB1Q14028 1251 aaPredicted RBP28.76■■■□□ 2.19
H2AFX-202ENST00000530167 COL22A1Q8NFW1 1626 aaPredicted RBP28.75■■■□□ 2.19
H2AFX-202ENST00000530167 CABLES1Q8TDN4 633 aa28.75■■■□□ 2.19
H2AFX-202ENST00000530167 OVOS2A0A0J9YW53 1432 aa28.75■■■□□ 2.19
H2AFX-202ENST00000530167 OVOS2Q6IE36 1432 aa28.75■■■□□ 2.19
H2AFX-202ENST00000530167 NSD2O96028 1365 aa28.75■■■□□ 2.19
H2AFX-202ENST00000530167 MARF1Q9Y4F3 1742 aaKnown RBP28.74■■■□□ 2.19
H2AFX-202ENST00000530167 CC2D1BQ5T0F9 858 aaKnown RBP28.74■■■□□ 2.19
H2AFX-202ENST00000530167 USP54Q70EL1 1684 aa28.73■■■□□ 2.19
H2AFX-202ENST00000530167 MED1Q15648 1581 aaPredicted RBP28.73■■■□□ 2.19
H2AFX-202ENST00000530167 USP19O94966 1318 aa28.72■■■□□ 2.19
H2AFX-202ENST00000530167 ANKRD26Q9UPS8 1709 aa28.71■■■□□ 2.19
H2AFX-202ENST00000530167 NPC1L1Q9UHC9 1359 aa28.71■■■□□ 2.19
H2AFX-202ENST00000530167 CRYBG1Q9Y4K1 1723 aa28.71■■■□□ 2.19
H2AFX-202ENST00000530167 HAP1P54257 671 aaPredicted RBP28.7■■■□□ 2.19
H2AFX-202ENST00000530167 SOX12O15370 315 aa28.69■■■□□ 2.18
H2AFX-202ENST00000530167 ILDR1Q86SU0 546 aaPredicted RBP28.69■■■□□ 2.18
H2AFX-202ENST00000530167 PHRF1Q9P1Y6 1649 aaKnown RBP28.69■■■□□ 2.18
H2AFX-202ENST00000530167 ABCA3Q99758 1704 aa28.68■■■□□ 2.18
H2AFX-202ENST00000530167 SLIT3O75094 1523 aa28.68■■■□□ 2.18
H2AFX-202ENST00000530167 GCP02774 474 aa28.68■■■□□ 2.18
H2AFX-202ENST00000530167 NUTM2BA6NNL0 878 aaPredicted RBP28.67■■■□□ 2.18
H2AFX-202ENST00000530167 NUTM2EB1AL46 878 aaPredicted RBP28.67■■■□□ 2.18
H2AFX-202ENST00000530167 MORC1Q86VD1 984 aa28.67■■■□□ 2.18
H2AFX-202ENST00000530167 NUTM2AQ8IVF1 878 aaPredicted RBP28.67■■■□□ 2.18
H2AFX-202ENST00000530167 SPATA31A6Q5VVP1 1343 aa28.67■■■□□ 2.18
H2AFX-202ENST00000530167 KCNH5Q8NCM2 988 aa28.65■■■□□ 2.18
H2AFX-202ENST00000530167 TNNT2P45379 298 aaPredicted RBP28.64■■■□□ 2.18
H2AFX-202ENST00000530167 FBLN1P23142 703 aa28.62■■■□□ 2.17
H2AFX-202ENST00000530167 ZC3H6P61129 1189 aaKnown RBP28.61■■■□□ 2.17
H2AFX-202ENST00000530167 NFAT5O94916 1531 aa28.6■■■□□ 2.17
H2AFX-202ENST00000530167 ADAMTS2O95450 1211 aa28.58■■■□□ 2.17
H2AFX-202ENST00000530167 LRP6O75581 1613 aa28.58■■■□□ 2.17
H2AFX-202ENST00000530167 ZBTB7CA1YPR0 619 aa28.57■■■□□ 2.16
H2AFX-202ENST00000530167 RRS1Q15050 365 aaKnown RBP28.56■■■□□ 2.16
H2AFX-202ENST00000530167 KIAA0232Q92628 1395 aa28.56■■■□□ 2.16
H2AFX-202ENST00000530167 AATKQ6ZMQ8 1374 aa28.55■■■□□ 2.16
H2AFX-202ENST00000530167 PARD3Q8TEW0 1356 aa28.55■■■□□ 2.16
H2AFX-202ENST00000530167 ARHGEF25Q86VW2 580 aa28.54■■■□□ 2.16
H2AFX-202ENST00000530167 PRDM11Q9NQV5 511 aa28.54■■■□□ 2.16
H2AFX-202ENST00000530167 CPDO75976 1380 aa28.54■■■□□ 2.16
H2AFX-202ENST00000530167 LTN1O94822 1766 aa28.53■■■□□ 2.16
H2AFX-202ENST00000530167 MAP2P11137 1827 aaKnown RBP28.53■■■□□ 2.16
H2AFX-202ENST00000530167 RALBP1Q15311 655 aa28.53■■■□□ 2.16
H2AFX-202ENST00000530167 DIEXFQ68CQ4 756 aaKnown RBP28.53■■■□□ 2.16
H2AFX-202ENST00000530167 MAP3K19Q56UN5 1328 aa28.52■■■□□ 2.16
H2AFX-202ENST00000530167 PRKRIP1Q9H875 184 aaPredicted RBP28.52■■■□□ 2.16
H2AFX-202ENST00000530167 CHRNA2Q15822 529 aa28.51■■■□□ 2.15
H2AFX-202ENST00000530167 MEX3CQ5U5Q3 659 aaKnown RBP28.51■■■□□ 2.15
H2AFX-202ENST00000530167 ANP32CO43423 234 aa28.51■■■□□ 2.15
H2AFX-202ENST00000530167 POLKQ9UBT6 870 aa28.51■■■□□ 2.15
H2AFX-202ENST00000530167 EMILIN1Q9Y6C2 1016 aa28.51■■■□□ 2.15
H2AFX-202ENST00000530167 FAM83GA6ND36 823 aa28.5■■■□□ 2.15
H2AFX-202ENST00000530167 PPM1GO15355 546 aaPredicted RBP28.48■■■□□ 2.15
H2AFX-202ENST00000530167 AMPHP49418 695 aa28.48■■■□□ 2.15
H2AFX-202ENST00000530167 C8orf37Q96NL8 207 aa28.48■■■□□ 2.15
H2AFX-202ENST00000530167 PPP2R1AP30153 589 aa28.47■■■□□ 2.15
H2AFX-202ENST00000530167 COL14A1Q05707 1796 aaKnown RBP28.46■■■□□ 2.15
H2AFX-202ENST00000530167 PEAK1Q9H792 1746 aa28.45■■■□□ 2.14
H2AFX-202ENST00000530167 MTHFSP49914 203 aa28.44■■■□□ 2.14
H2AFX-202ENST00000530167 NGLY1Q96IV0 654 aa28.44■■■□□ 2.14
H2AFX-202ENST00000530167 COL18A1P39060 1754 aa28.44■■■□□ 2.14
H2AFX-202ENST00000530167 SMG6Q86US8 1419 aaKnown RBP28.43■■■□□ 2.14
H2AFX-202ENST00000530167 HOXC9P31274 260 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms