RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 DGAT1O75907 488 aa10.73□□□□□ -0.69
USP47-209ENST00000530041 RC3H1Q5TC82 1133 aaKnown RBP10.73□□□□□ -0.69
USP47-209ENST00000530041 CYP4X1Q8N118 509 aa10.73□□□□□ -0.69
USP47-209ENST00000530041 MRGPRX2Q96LB1 330 aa10.73□□□□□ -0.69
USP47-209ENST00000530041 SH3BP2P78314 561 aa10.72□□□□□ -0.69
USP47-209ENST00000530041 PKDCCQ504Y2 493 aa10.72□□□□□ -0.69
USP47-209ENST00000530041 BAP1Q92560 729 aa10.72□□□□□ -0.69
USP47-209ENST00000530041 CTDSPL2Q05D32 466 aa10.71□□□□□ -0.69
USP47-209ENST00000530041 TRAF7Q6Q0C0 670 aa10.71□□□□□ -0.69
USP47-209ENST00000530041 FAM187AA6NFU0 413 aa10.7□□□□□ -0.7
USP47-209ENST00000530041 LCE2BO14633 110 aa10.7□□□□□ -0.7
USP47-209ENST00000530041 SNIP1Q8TAD8 396 aaKnown RBP10.7□□□□□ -0.7
USP47-209ENST00000530041 TTC24A2A3L6 582 aaPredicted RBP10.69□□□□□ -0.7
USP47-209ENST00000530041 LINC01559Q495D7 138 aa10.69□□□□□ -0.7
USP47-209ENST00000530041 ZNF511Q8NB15 262 aa10.69□□□□□ -0.7
USP47-209ENST00000530041 RFC5P40937 340 aa10.68□□□□□ -0.7
USP47-209ENST00000530041 EHBP1Q8NDI1 1231 aa10.68□□□□□ -0.7
USP47-209ENST00000530041 AP1G2O75843 785 aa10.66□□□□□ -0.7
USP47-209ENST00000530041 ARMC2Q8NEN0 867 aa10.66□□□□□ -0.7
USP47-209ENST00000530041 LRRN4Q8WUT4 740 aa10.66□□□□□ -0.7
USP47-209ENST00000530041 SIAH2O43255 324 aa10.65□□□□□ -0.7
USP47-209ENST00000530041 MYT1Q01538 1121 aa10.65□□□□□ -0.7
USP47-209ENST00000530041 AVPP01185 164 aa10.63□□□□□ -0.71
USP47-209ENST00000530041 SMPD1P17405 629 aa10.63□□□□□ -0.71
USP47-209ENST00000530041 VARSP26640 1264 aaKnown RBP10.63□□□□□ -0.71
USP47-209ENST00000530041 J3QL48 77 aa10.62□□□□□ -0.71
USP47-209ENST00000530041 TMEM259Q4ZIN3 620 aa10.62□□□□□ -0.71
USP47-209ENST00000530041 USP17L8P0C7I0 530 aa10.61□□□□□ -0.71
USP47-209ENST00000530041 NBPF14Q5TI25 921 aa10.61□□□□□ -0.71
USP47-209ENST00000530041 FOXJ1Q92949 421 aa10.61□□□□□ -0.71
USP47-209ENST00000530041 ALDH1A1P00352 501 aa10.6□□□□□ -0.71
USP47-209ENST00000530041 BPHLQ86WA6 291 aaPredicted RBP10.6□□□□□ -0.71
USP47-209ENST00000530041 GPKOWQ92917 476 aaPredicted RBP eCLIP10.6□□□□□ -0.71
USP47-209ENST00000530041 NR6A1Q15406 480 aa10.59□□□□□ -0.71
USP47-209ENST00000530041 CRIPAKQ8N1N5 446 aa10.59□□□□□ -0.71
USP47-209ENST00000530041 MPNDQ8N594 471 aa10.59□□□□□ -0.71
USP47-209ENST00000530041 AGERQ15109 404 aa10.58□□□□□ -0.72
USP47-209ENST00000530041 FAM174AQ8TBP5 190 aa10.58□□□□□ -0.72
USP47-209ENST00000530041 FKBPLQ9UIM3 349 aa10.58□□□□□ -0.72
USP47-209ENST00000530041 CTC1Q2NKJ3 1217 aa10.57□□□□□ -0.72
USP47-209ENST00000530041 C4orf48Q5BLP8 95 aa10.57□□□□□ -0.72
USP47-209ENST00000530041 SH3RF1Q7Z6J0 888 aa10.57□□□□□ -0.72
USP47-209ENST00000530041 HMX1Q9NP08 348 aaPredicted RBP10.57□□□□□ -0.72
USP47-209ENST00000530041 AAASQ9NRG9 546 aa10.57□□□□□ -0.72
USP47-209ENST00000530041 TLL2Q9Y6L7 1015 aa10.57□□□□□ -0.72
USP47-209ENST00000530041 SH3BP5LQ7L8J4 393 aa10.56□□□□□ -0.72
USP47-209ENST00000530041 HPS1Q92902 700 aa10.56□□□□□ -0.72
USP47-209ENST00000530041 ZC3H4Q9UPT8 1303 aaKnown RBP10.56□□□□□ -0.72
USP47-209ENST00000530041 ST8SIA5O15466 376 aa10.55□□□□□ -0.72
USP47-209ENST00000530041 SMCPP49901 116 aaPredicted RBP10.55□□□□□ -0.72
USP47-209ENST00000530041 PDXDC2PQ6P474 469 aa10.55□□□□□ -0.72
USP47-209ENST00000530041 WASF2Q9Y6W5 498 aa10.55□□□□□ -0.72
USP47-209ENST00000530041 AXIN1O15169 862 aa10.54□□□□□ -0.72
USP47-209ENST00000530041 EPS8L1Q8TE68 723 aa10.54□□□□□ -0.72
USP47-209ENST00000530041 PNMA1Q8ND90 353 aa10.53□□□□□ -0.72
USP47-209ENST00000530041 CDK15Q96Q40 435 aa10.53□□□□□ -0.72
USP47-209ENST00000530041 C1QTNF2Q9BXJ5 285 aa10.53□□□□□ -0.72
USP47-209ENST00000530041 BANK1Q8NDB2 785 aa10.52□□□□□ -0.73
USP47-209ENST00000530041 MAGEB6P1A0A0J9YX57 407 aa10.51□□□□□ -0.73
USP47-209ENST00000530041 TRIM34Q9BYJ4 488 aa10.51□□□□□ -0.73
USP47-209ENST00000530041 ADH1CP00326 375 aa10.5□□□□□ -0.73
USP47-209ENST00000530041 TRMT44Q8IYL2 757 aaKnown RBP10.5□□□□□ -0.73
USP47-209ENST00000530041 ARHGAP9Q9BRR9 750 aa10.5□□□□□ -0.73
USP47-209ENST00000530041 GPSM3Q9Y4H4 160 aa10.5□□□□□ -0.73
USP47-209ENST00000530041 ARID5BQ14865 1188 aa10.49□□□□□ -0.73
USP47-209ENST00000530041 GJD4Q96KN9 370 aaPredicted RBP10.49□□□□□ -0.73
USP47-209ENST00000530041 CARD14Q9BXL6 1004 aa10.49□□□□□ -0.73
USP47-209ENST00000530041 PTK2Q05397 1052 aa10.48□□□□□ -0.73
USP47-209ENST00000530041 NNTQ13423 1086 aa10.48□□□□□ -0.73
USP47-209ENST00000530041 DACH1Q9UI36 760 aa10.48□□□□□ -0.73
USP47-209ENST00000530041 SOCS7O14512 581 aa10.47□□□□□ -0.73
USP47-209ENST00000530041 ERFEQ4G0M1 354 aa10.47□□□□□ -0.73
USP47-209ENST00000530041 ZNF787Q6DD87 383 aa10.47□□□□□ -0.73
USP47-209ENST00000530041 MAP4K5Q9Y4K4 846 aa10.47□□□□□ -0.73
USP47-209ENST00000530041 GRM5P41594 1212 aa10.46□□□□□ -0.73
USP47-209ENST00000530041 NR5A1Q13285 461 aa10.46□□□□□ -0.73
USP47-209ENST00000530041 ZBTB33Q86T24 672 aa10.46□□□□□ -0.73
USP47-209ENST00000530041 OCSTAMPQ9BR26 566 aa10.46□□□□□ -0.73
USP47-209ENST00000530041 VASH1Q7L8A9 365 aaPredicted RBP10.44□□□□□ -0.74
USP47-209ENST00000530041 MTMR14Q8NCE2 650 aa10.44□□□□□ -0.74
USP47-209ENST00000530041 SNRKQ9NRH2 765 aa10.44□□□□□ -0.74
USP47-209ENST00000530041 POTECB2RU33 542 aa10.43□□□□□ -0.74
USP47-209ENST00000530041 CAPN5O15484 640 aaPredicted RBP10.43□□□□□ -0.74
USP47-209ENST00000530041 ATP13A2Q9NQ11 1180 aa10.43□□□□□ -0.74
USP47-209ENST00000530041 APBB1O00213 710 aa10.42□□□□□ -0.74
USP47-209ENST00000530041 NR3C2P08235 984 aa10.42□□□□□ -0.74
USP47-209ENST00000530041 ADAM32Q8TC27 787 aa10.42□□□□□ -0.74
USP47-209ENST00000530041 SLC10A4Q96EP9 437 aa10.42□□□□□ -0.74
USP47-209ENST00000530041 KLF16Q9BXK1 252 aaPredicted RBP10.42□□□□□ -0.74
USP47-209ENST00000530041 CDV3Q9UKY7 258 aaKnown RBP10.42□□□□□ -0.74
USP47-209ENST00000530041 FSHRP23945 695 aa10.41□□□□□ -0.74
USP47-209ENST00000530041 GMPR2Q9P2T1 348 aaKnown RBP10.41□□□□□ -0.74
USP47-209ENST00000530041 TIMP2P16035 220 aa10.4□□□□□ -0.74
USP47-209ENST00000530041 WDR4P57081 412 aaKnown RBP10.4□□□□□ -0.74
USP47-209ENST00000530041 NDUFB9Q9Y6M9 179 aa10.4□□□□□ -0.74
USP47-209ENST00000530041 ZBBXA8MT70 800 aa10.38□□□□□ -0.75
USP47-209ENST00000530041 KCTD15Q96SI1 283 aaPredicted RBP10.38□□□□□ -0.75
USP47-209ENST00000530041 CCDC116Q8IYX3 515 aa10.37□□□□□ -0.75
USP47-209ENST00000530041 SENP2Q9HC62 589 aa10.37□□□□□ -0.75
USP47-209ENST00000530041 ZIC2O95409 532 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms