RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
TTC39A-216ENST00000530004 CC2D1BQ5T0F9 858 aaKnown RBP19.56■□□□□ 0.72
TTC39A-216ENST00000530004 EDC4Q6P2E9 1401 aaKnown RBP19.56■□□□□ 0.72
TTC39A-216ENST00000530004 SSH2Q76I76 1423 aa19.56■□□□□ 0.72
TTC39A-216ENST00000530004 AKAP12Q02952 1782 aa19.56■□□□□ 0.72
TTC39A-216ENST00000530004 SOS2Q07890 1332 aaPredicted RBP19.55■□□□□ 0.72
TTC39A-216ENST00000530004 MRS2Q9HD23 443 aa19.55■□□□□ 0.72
TTC39A-216ENST00000530004 NSD3Q9BZ95 1437 aa19.55■□□□□ 0.72
TTC39A-216ENST00000530004 BRD4O60885 1362 aaPredicted RBP19.55■□□□□ 0.72
TTC39A-216ENST00000530004 PARD3Q8TEW0 1356 aa19.55■□□□□ 0.72
TTC39A-216ENST00000530004 PXDNQ92626 1479 aa19.55■□□□□ 0.72
TTC39A-216ENST00000530004 NHSL1Q5SYE7 1610 aa19.53■□□□□ 0.72
TTC39A-216ENST00000530004 AHDC1Q5TGY3 1603 aaPredicted RBP19.53■□□□□ 0.72
TTC39A-216ENST00000530004 TTC21BQ7Z4L5 1316 aa19.53■□□□□ 0.72
TTC39A-216ENST00000530004 MYBBP1AQ9BQG0 1328 aaKnown RBP19.53■□□□□ 0.72
TTC39A-216ENST00000530004 MON2Q7Z3U7 1717 aa19.53■□□□□ 0.72
TTC39A-216ENST00000530004 AMER1Q5JTC6 1135 aaPredicted RBP19.52■□□□□ 0.72
TTC39A-216ENST00000530004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.52■□□□□ 0.72
TTC39A-216ENST00000530004 PAK3O75914 559 aaPredicted RBP19.52■□□□□ 0.71
TTC39A-216ENST00000530004 SBNO1A3KN83 1393 aa19.51■□□□□ 0.71
TTC39A-216ENST00000530004 NRKQ7Z2Y5 1582 aa19.51■□□□□ 0.71
TTC39A-216ENST00000530004 TTC21AQ8NDW8 1320 aa19.51■□□□□ 0.71
TTC39A-216ENST00000530004 CGNL1Q0VF96 1302 aa19.5■□□□□ 0.71
TTC39A-216ENST00000530004 NPC1L1Q9UHC9 1359 aa19.49■□□□□ 0.71
TTC39A-216ENST00000530004 SPATA31A3Q5VYP0 1347 aa19.49■□□□□ 0.71
TTC39A-216ENST00000530004 TRPM3Q9HCF6 1732 aaPredicted RBP19.48■□□□□ 0.71
TTC39A-216ENST00000530004 FYB1O15117 783 aa19.48■□□□□ 0.71
TTC39A-216ENST00000530004 TNS3Q68CZ2 1445 aa19.47■□□□□ 0.71
TTC39A-216ENST00000530004 NME9Q86XW9 330 aa19.47■□□□□ 0.71
TTC39A-216ENST00000530004 ABTB2Q8N961 1025 aa19.47■□□□□ 0.71
TTC39A-216ENST00000530004 LRRC59Q96AG4 307 aaKnown RBP19.47■□□□□ 0.71
TTC39A-216ENST00000530004 LMOD2Q6P5Q4 547 aa19.46■□□□□ 0.71
TTC39A-216ENST00000530004 FBXO41Q8TF61 875 aa19.46■□□□□ 0.71
TTC39A-216ENST00000530004 COL16A1Q07092 1604 aaPredicted RBP19.46■□□□□ 0.71
TTC39A-216ENST00000530004 PHLPP1O60346 1717 aa19.45■□□□□ 0.7
TTC39A-216ENST00000530004 NLRP13Q86W25 1043 aa19.45■□□□□ 0.7
TTC39A-216ENST00000530004 GGNBP2Q9H3C7 697 aa19.45■□□□□ 0.7
TTC39A-216ENST00000530004 HSPA1LP34931 641 aa19.44■□□□□ 0.7
TTC39A-216ENST00000530004 NUTM2GQ5VZR2 741 aa19.44■□□□□ 0.7
TTC39A-216ENST00000530004 FAM9BQ8IZU0 186 aa19.44■□□□□ 0.7
TTC39A-216ENST00000530004 ZRANB1Q9UGI0 708 aa19.44■□□□□ 0.7
TTC39A-216ENST00000530004 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
TTC39A-216ENST00000530004 NSD2O96028 1365 aa19.44■□□□□ 0.7
TTC39A-216ENST00000530004 NLRP6P59044 892 aa19.43■□□□□ 0.7
TTC39A-216ENST00000530004 USP31Q70CQ4 1352 aa19.43■□□□□ 0.7
TTC39A-216ENST00000530004 ALS2Q96Q42 1657 aa19.43■□□□□ 0.7
TTC39A-216ENST00000530004 PIK3C2AO00443 1686 aa19.42■□□□□ 0.7
TTC39A-216ENST00000530004 OVOS2A0A0J9YW53 1432 aa19.41■□□□□ 0.7
TTC39A-216ENST00000530004 OVOS2Q6IE36 1432 aa19.41■□□□□ 0.7
TTC39A-216ENST00000530004 COG3Q96JB2 828 aa19.41■□□□□ 0.7
TTC39A-216ENST00000530004 PNPLA6Q8IY17 1366 aa19.4■□□□□ 0.7
TTC39A-216ENST00000530004 PPP2R1AP30153 589 aa19.39■□□□□ 0.69
TTC39A-216ENST00000530004 KIF20BQ96Q89 1820 aa19.38■□□□□ 0.69
TTC39A-216ENST00000530004 PNISRQ8TF01 805 aaKnown RBP19.38■□□□□ 0.69
TTC39A-216ENST00000530004 USP19O94966 1318 aa19.37■□□□□ 0.69
TTC39A-216ENST00000530004 MORC1Q86VD1 984 aa19.37■□□□□ 0.69
TTC39A-216ENST00000530004 JCADQ9P266 1359 aa19.36■□□□□ 0.69
TTC39A-216ENST00000530004 PLEKHG5O94827 1062 aa19.36■□□□□ 0.69
TTC39A-216ENST00000530004 HNRNPUQ00839 825 aaKnown RBP eCLIP19.36■□□□□ 0.69
TTC39A-216ENST00000530004 CABLES1Q8TDN4 633 aa19.36■□□□□ 0.69
TTC39A-216ENST00000530004 USP54Q70EL1 1684 aa19.36■□□□□ 0.69
TTC39A-216ENST00000530004 MED1Q15648 1581 aaPredicted RBP19.35■□□□□ 0.69
TTC39A-216ENST00000530004 GCP02774 474 aa19.34■□□□□ 0.69
TTC39A-216ENST00000530004 MARF1Q9Y4F3 1742 aaKnown RBP19.34■□□□□ 0.69
TTC39A-216ENST00000530004 SLIT3O75094 1523 aa19.33■□□□□ 0.69
TTC39A-216ENST00000530004 KCNH5Q8NCM2 988 aa19.33■□□□□ 0.68
TTC39A-216ENST00000530004 COL22A1Q8NFW1 1626 aaPredicted RBP19.33■□□□□ 0.68
TTC39A-216ENST00000530004 ANKRD26Q9UPS8 1709 aa19.33■□□□□ 0.68
TTC39A-216ENST00000530004 SOX12O15370 315 aa19.32■□□□□ 0.68
TTC39A-216ENST00000530004 TNNT2P45379 298 aaPredicted RBP19.32■□□□□ 0.68
TTC39A-216ENST00000530004 FBLN1P23142 703 aa19.32■□□□□ 0.68
TTC39A-216ENST00000530004 AATKQ6ZMQ8 1374 aa19.3■□□□□ 0.68
TTC39A-216ENST00000530004 SHPRHQ149N8 1683 aa19.3■□□□□ 0.68
TTC39A-216ENST00000530004 HAP1P54257 671 aaPredicted RBP19.3■□□□□ 0.68
TTC39A-216ENST00000530004 CRYBG1Q9Y4K1 1723 aa19.29■□□□□ 0.68
TTC39A-216ENST00000530004 SPATA31A6Q5VVP1 1343 aa19.28■□□□□ 0.68
TTC39A-216ENST00000530004 NFAT5O94916 1531 aa19.28■□□□□ 0.68
TTC39A-216ENST00000530004 PHRF1Q9P1Y6 1649 aaKnown RBP19.28■□□□□ 0.68
TTC39A-216ENST00000530004 ZC3H6P61129 1189 aaKnown RBP19.27■□□□□ 0.68
TTC39A-216ENST00000530004 RRS1Q15050 365 aaKnown RBP19.27■□□□□ 0.68
TTC39A-216ENST00000530004 NUTM2BA6NNL0 878 aaPredicted RBP19.26■□□□□ 0.67
TTC39A-216ENST00000530004 NUTM2EB1AL46 878 aaPredicted RBP19.26■□□□□ 0.67
TTC39A-216ENST00000530004 ARHGEF25Q86VW2 580 aa19.26■□□□□ 0.67
TTC39A-216ENST00000530004 NUTM2AQ8IVF1 878 aaPredicted RBP19.26■□□□□ 0.67
TTC39A-216ENST00000530004 POLKQ9UBT6 870 aa19.26■□□□□ 0.67
TTC39A-216ENST00000530004 ABCA3Q99758 1704 aa19.26■□□□□ 0.67
TTC39A-216ENST00000530004 MAP3K19Q56UN5 1328 aa19.25■□□□□ 0.67
TTC39A-216ENST00000530004 CPDO75976 1380 aa19.25■□□□□ 0.67
TTC39A-216ENST00000530004 EMILIN1Q9Y6C2 1016 aa19.24■□□□□ 0.67
TTC39A-216ENST00000530004 KIAA0232Q92628 1395 aa19.24■□□□□ 0.67
TTC39A-216ENST00000530004 MTHFSP49914 203 aa19.23■□□□□ 0.67
TTC39A-216ENST00000530004 ADAMTS2O95450 1211 aa19.22■□□□□ 0.67
TTC39A-216ENST00000530004 PRDM11Q9NQV5 511 aa19.22■□□□□ 0.67
TTC39A-216ENST00000530004 SMG6Q86US8 1419 aaKnown RBP19.22■□□□□ 0.67
TTC39A-216ENST00000530004 ZBED9Q6R2W3 1325 aa19.22■□□□□ 0.67
TTC39A-216ENST00000530004 ZBTB7CA1YPR0 619 aa19.21■□□□□ 0.67
TTC39A-216ENST00000530004 WDR43Q15061 677 aaKnown RBP eCLIP19.21■□□□□ 0.67
TTC39A-216ENST00000530004 PPM1GO15355 546 aaPredicted RBP19.21■□□□□ 0.67
TTC39A-216ENST00000530004 AMPHP49418 695 aa19.21■□□□□ 0.67
TTC39A-216ENST00000530004 LRP6O75581 1613 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms