RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
LRP5-206ENST00000529993 NINLQ9Y2I6 1382 aa18.19■□□□□ 0.5
LRP5-206ENST00000529993 UGGT2Q9NYU1 1516 aa18.18■□□□□ 0.5
LRP5-206ENST00000529993 HDGFL1Q5TGJ6 251 aa18.18■□□□□ 0.5
LRP5-206ENST00000529993 RNF214Q8ND24 703 aa18.18■□□□□ 0.5
LRP5-206ENST00000529993 NEUROD6Q96NK8 337 aa18.18■□□□□ 0.5
LRP5-206ENST00000529993 ZNF692Q9BU19 519 aaPredicted RBP18.18■□□□□ 0.5
LRP5-206ENST00000529993 GNAI2P04899 355 aa18.18■□□□□ 0.5
LRP5-206ENST00000529993 RNF20Q5VTR2 975 aa18.17■□□□□ 0.5
LRP5-206ENST00000529993 BECN2A8MW95 431 aa18.17■□□□□ 0.5
LRP5-206ENST00000529993 CLASRPQ8N2M8 674 aaKnown RBP18.17■□□□□ 0.5
LRP5-206ENST00000529993 RASSF8Q8NHQ8 419 aa18.17■□□□□ 0.5
LRP5-206ENST00000529993 MIS18AQ9NYP9 233 aa18.17■□□□□ 0.5
LRP5-206ENST00000529993 APPP05067 770 aa18.16■□□□□ 0.5
LRP5-206ENST00000529993 NFE2L2Q16236 605 aa18.16■□□□□ 0.5
LRP5-206ENST00000529993 GOLGA6L19H0YKK7 550 aa18.16■□□□□ 0.5
LRP5-206ENST00000529993 CAVIN1Q6NZI2 390 aaKnown RBP18.16■□□□□ 0.5
LRP5-206ENST00000529993 BICD2Q8TD16 824 aa18.16■□□□□ 0.5
LRP5-206ENST00000529993 NUDT16Q96DE0 195 aaKnown RBP18.16■□□□□ 0.5
LRP5-206ENST00000529993 IDI1Q13907 227 aa18.16■□□□□ 0.5
LRP5-206ENST00000529993 HSP90AA2PQ14568 343 aaPredicted RBP18.15■□□□□ 0.5
LRP5-206ENST00000529993 FBXO31Q5XUX0 539 aaPredicted RBP18.15■□□□□ 0.5
LRP5-206ENST00000529993 MRE11P49959 708 aa18.15■□□□□ 0.5
LRP5-206ENST00000529993 CCDC61Q9Y6R9 512 aa18.15■□□□□ 0.5
LRP5-206ENST00000529993 RABEP1Q15276 862 aa18.14■□□□□ 0.49
LRP5-206ENST00000529993 PRPF40AO75400 957 aaKnown RBP18.14■□□□□ 0.49
LRP5-206ENST00000529993 ADGRL1O94910 1474 aa18.14■□□□□ 0.49
LRP5-206ENST00000529993 NKTRP30414 1462 aaKnown RBP18.14■□□□□ 0.49
LRP5-206ENST00000529993 CCDC27Q2M243 656 aa18.13■□□□□ 0.49
LRP5-206ENST00000529993 MCM10Q7L590 875 aa18.13■□□□□ 0.49
LRP5-206ENST00000529993 NME9Q86XW9 330 aa18.13■□□□□ 0.49
LRP5-206ENST00000529993 CCDC34Q96HJ3 373 aa18.13■□□□□ 0.49
LRP5-206ENST00000529993 EMILIN1Q9Y6C2 1016 aa18.13■□□□□ 0.49
LRP5-206ENST00000529993 NASPP49321 788 aaPredicted RBP18.13■□□□□ 0.49
LRP5-206ENST00000529993 CPLX1O14810 134 aa18.13■□□□□ 0.49
LRP5-206ENST00000529993 CNTROBQ8N137 903 aa18.13■□□□□ 0.49
LRP5-206ENST00000529993 FSD1Q9BTV5 496 aa18.13■□□□□ 0.49
LRP5-206ENST00000529993 NUP153P49790 1475 aaKnown RBP18.12■□□□□ 0.49
LRP5-206ENST00000529993 MAP4K4O95819 1239 aaPredicted RBP18.12■□□□□ 0.49
LRP5-206ENST00000529993 ATF3P18847 181 aa18.12■□□□□ 0.49
LRP5-206ENST00000529993 FBXW7Q969H0 707 aa18.12■□□□□ 0.49
LRP5-206ENST00000529993 CD109Q6YHK3 1445 aa18.11■□□□□ 0.49
LRP5-206ENST00000529993 NOS1P29475 1434 aa18.11■□□□□ 0.49
LRP5-206ENST00000529993 SCAF11Q99590 1463 aaKnown RBP18.11■□□□□ 0.49
LRP5-206ENST00000529993 GPRASP1Q5JY77 1395 aa18.11■□□□□ 0.49
LRP5-206ENST00000529993 PLEKHO1Q53GL0 409 aaPredicted RBP18.1■□□□□ 0.49
LRP5-206ENST00000529993 FBLN1P23142 703 aa18.1■□□□□ 0.49
LRP5-206ENST00000529993 CCT4P50991 539 aaKnown RBP18.1■□□□□ 0.49
LRP5-206ENST00000529993 IL1RAPL2Q9NP60 686 aa18.1■□□□□ 0.49
LRP5-206ENST00000529993 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
LRP5-206ENST00000529993 FAM43AQ8N2R8 423 aa18.1■□□□□ 0.49
LRP5-206ENST00000529993 LRRCC1Q9C099 1032 aa18.1■□□□□ 0.49
LRP5-206ENST00000529993 ATP10BO94823 1461 aa18.09■□□□□ 0.49
LRP5-206ENST00000529993 ZNF530Q6P9A1 599 aaPredicted RBP18.09■□□□□ 0.49
LRP5-206ENST00000529993 K7ELQ4 463 aaPredicted RBP18.09■□□□□ 0.49
LRP5-206ENST00000529993 LRRFIP1Q32MZ4 808 aaKnown RBP18.09■□□□□ 0.49
LRP5-206ENST00000529993 IGHDP01880 384 aa18.09■□□□□ 0.49
LRP5-206ENST00000529993 CPLX2Q6PUV4 134 aaKnown RBP18.09■□□□□ 0.49
LRP5-206ENST00000529993 EXOC6BQ9Y2D4 811 aa18.08■□□□□ 0.49
LRP5-206ENST00000529993 CLSTN1O94985 981 aa18.08■□□□□ 0.49
LRP5-206ENST00000529993 TRIM27P14373 513 aa18.08■□□□□ 0.48
LRP5-206ENST00000529993 WASHC4Q2M389 1173 aa18.08■□□□□ 0.48
LRP5-206ENST00000529993 SRCIN1Q9C0H9 1055 aa18.08■□□□□ 0.48
LRP5-206ENST00000529993 XPCQ01831 940 aaPredicted RBP18.07■□□□□ 0.48
LRP5-206ENST00000529993 THEMISQ8N1K5 641 aaPredicted RBP18.07■□□□□ 0.48
LRP5-206ENST00000529993 DNAJC2Q99543 621 aaKnown RBP18.07■□□□□ 0.48
LRP5-206ENST00000529993 SIL1Q9H173 461 aa18.07■□□□□ 0.48
LRP5-206ENST00000529993 SYNE3Q6ZMZ3 975 aa18.07■□□□□ 0.48
LRP5-206ENST00000529993 ZNF592Q92610 1267 aa18.07■□□□□ 0.48
LRP5-206ENST00000529993 MCM4P33991 863 aa18.06■□□□□ 0.48
LRP5-206ENST00000529993 AKAP17AQ02040 695 aaKnown RBP18.06■□□□□ 0.48
LRP5-206ENST00000529993 TRDNQ13061 729 aa18.06■□□□□ 0.48
LRP5-206ENST00000529993 PROSER2Q86WR7 435 aaPredicted RBP18.06■□□□□ 0.48
LRP5-206ENST00000529993 SMARCA5O60264 1052 aaPredicted RBP18.06■□□□□ 0.48
LRP5-206ENST00000529993 C14orf93Q9H972 538 aaKnown RBP18.06■□□□□ 0.48
LRP5-206ENST00000529993 PES1O00541 588 aaKnown RBP18.05■□□□□ 0.48
LRP5-206ENST00000529993 FIBPO43427 364 aa18.05■□□□□ 0.48
LRP5-206ENST00000529993 FAM13BQ9NYF5 915 aa18.05■□□□□ 0.48
LRP5-206ENST00000529993 CHMP4CQ96CF2 233 aa18.05■□□□□ 0.48
LRP5-206ENST00000529993 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.05■□□□□ 0.48
LRP5-206ENST00000529993 RALGAPBQ86X10 1494 aa18.05■□□□□ 0.48
LRP5-206ENST00000529993 SRGAP3O43295 1099 aa18.05■□□□□ 0.48
LRP5-206ENST00000529993 RAPGEF6Q8TEU7 1601 aa18.04■□□□□ 0.48
LRP5-206ENST00000529993 FAM135AQ9P2D6 1515 aa18.04■□□□□ 0.48
LRP5-206ENST00000529993 TRIM29Q14134 588 aa18.03■□□□□ 0.48
LRP5-206ENST00000529993 NFXL1Q6ZNB6 911 aa18.03■□□□□ 0.48
LRP5-206ENST00000529993 RPAP2Q8IXW5 612 aaPredicted RBP18.03■□□□□ 0.48
LRP5-206ENST00000529993 KDM4AO75164 1064 aa18.03■□□□□ 0.48
LRP5-206ENST00000529993 TESK2Q96S53 571 aa18.03■□□□□ 0.48
LRP5-206ENST00000529993 MYL6BP14649 208 aa18.03■□□□□ 0.48
LRP5-206ENST00000529993 FANCAO15360 1455 aa18.03■□□□□ 0.48
LRP5-206ENST00000529993 SASS6Q6UVJ0 657 aa18.02■□□□□ 0.48
LRP5-206ENST00000529993 F6X3S4 739 aa18.02■□□□□ 0.48
LRP5-206ENST00000529993 MCM2P49736 904 aa18.02■□□□□ 0.48
LRP5-206ENST00000529993 PRAG1Q86YV5 1406 aa18.02■□□□□ 0.47
LRP5-206ENST00000529993 RALYLQ86SE5 291 aaKnown RBP18.01■□□□□ 0.47
LRP5-206ENST00000529993 PSMA5P28066 241 aa18.01■□□□□ 0.47
LRP5-206ENST00000529993 FAM177BA6PVY3 158 aa18.01■□□□□ 0.47
LRP5-206ENST00000529993 G3V3G9 751 aa18.01■□□□□ 0.47
LRP5-206ENST00000529993 DCAF8Q5TAQ9 597 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms