RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 PER1O15534 1290 aaPredicted RBP18.74■□□□□ 0.59
SMCO4-205ENST00000529714 TTC21BQ7Z4L5 1316 aa18.74■□□□□ 0.59
SMCO4-205ENST00000529714 PHLPP1O60346 1717 aa18.73■□□□□ 0.59
SMCO4-205ENST00000529714 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
SMCO4-205ENST00000529714 ALS2Q96Q42 1657 aa18.73■□□□□ 0.59
SMCO4-205ENST00000529714 COL16A1Q07092 1604 aaPredicted RBP18.72■□□□□ 0.59
SMCO4-205ENST00000529714 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
SMCO4-205ENST00000529714 KIF20BQ96Q89 1820 aa18.72■□□□□ 0.59
SMCO4-205ENST00000529714 CGNL1Q0VF96 1302 aa18.72■□□□□ 0.59
SMCO4-205ENST00000529714 NPC1L1Q9UHC9 1359 aa18.71■□□□□ 0.59
SMCO4-205ENST00000529714 DDX17Q92841 729 aaKnown RBP18.71■□□□□ 0.59
SMCO4-205ENST00000529714 TNS3Q68CZ2 1445 aa18.71■□□□□ 0.59
SMCO4-205ENST00000529714 NSD2O96028 1365 aa18.7■□□□□ 0.58
SMCO4-205ENST00000529714 PIK3C2AO00443 1686 aa18.7■□□□□ 0.58
SMCO4-205ENST00000529714 USP54Q70EL1 1684 aa18.7■□□□□ 0.58
SMCO4-205ENST00000529714 XPCQ01831 940 aaPredicted RBP18.69■□□□□ 0.58
SMCO4-205ENST00000529714 SPATA31A3Q5VYP0 1347 aa18.69■□□□□ 0.58
SMCO4-205ENST00000529714 ANKRD26Q9UPS8 1709 aa18.69■□□□□ 0.58
SMCO4-205ENST00000529714 ARHGEF10O15013 1369 aa18.68■□□□□ 0.58
SMCO4-205ENST00000529714 AMER1Q5JTC6 1135 aaPredicted RBP18.68■□□□□ 0.58
SMCO4-205ENST00000529714 USP31Q70CQ4 1352 aa18.68■□□□□ 0.58
SMCO4-205ENST00000529714 PAK3O75914 559 aaPredicted RBP18.67■□□□□ 0.58
SMCO4-205ENST00000529714 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMCO4-205ENST00000529714 LRRC59Q96AG4 307 aaKnown RBP18.67■□□□□ 0.58
SMCO4-205ENST00000529714 FYB1O15117 783 aa18.66■□□□□ 0.58
SMCO4-205ENST00000529714 FBXO41Q8TF61 875 aa18.66■□□□□ 0.58
SMCO4-205ENST00000529714 MED1Q15648 1581 aaPredicted RBP18.66■□□□□ 0.58
SMCO4-205ENST00000529714 ABTB2Q8N961 1025 aa18.65■□□□□ 0.58
SMCO4-205ENST00000529714 OVOS2A0A0J9YW53 1432 aa18.65■□□□□ 0.58
SMCO4-205ENST00000529714 OVOS2Q6IE36 1432 aa18.65■□□□□ 0.58
SMCO4-205ENST00000529714 MARF1Q9Y4F3 1742 aaKnown RBP18.64■□□□□ 0.57
SMCO4-205ENST00000529714 NME9Q86XW9 330 aa18.64■□□□□ 0.57
SMCO4-205ENST00000529714 COL22A1Q8NFW1 1626 aaPredicted RBP18.63■□□□□ 0.57
SMCO4-205ENST00000529714 NLRP13Q86W25 1043 aa18.62■□□□□ 0.57
SMCO4-205ENST00000529714 SHPRHQ149N8 1683 aa18.62■□□□□ 0.57
SMCO4-205ENST00000529714 CRYBG1Q9Y4K1 1723 aa18.62■□□□□ 0.57
SMCO4-205ENST00000529714 SLIT3O75094 1523 aa18.61■□□□□ 0.57
SMCO4-205ENST00000529714 USP19O94966 1318 aa18.61■□□□□ 0.57
SMCO4-205ENST00000529714 NLRP6P59044 892 aa18.61■□□□□ 0.57
SMCO4-205ENST00000529714 COG3Q96JB2 828 aa18.61■□□□□ 0.57
SMCO4-205ENST00000529714 PNPLA6Q8IY17 1366 aa18.6■□□□□ 0.57
SMCO4-205ENST00000529714 LMOD2Q6P5Q4 547 aa18.6■□□□□ 0.57
SMCO4-205ENST00000529714 GGNBP2Q9H3C7 697 aa18.6■□□□□ 0.57
SMCO4-205ENST00000529714 JCADQ9P266 1359 aa18.59■□□□□ 0.57
SMCO4-205ENST00000529714 HSPA1LP34931 641 aa18.59■□□□□ 0.57
SMCO4-205ENST00000529714 PHRF1Q9P1Y6 1649 aaKnown RBP18.59■□□□□ 0.57
SMCO4-205ENST00000529714 ABCA3Q99758 1704 aa18.58■□□□□ 0.57
SMCO4-205ENST00000529714 CC2D1BQ5T0F9 858 aaKnown RBP18.58■□□□□ 0.56
SMCO4-205ENST00000529714 ZRANB1Q9UGI0 708 aa18.58■□□□□ 0.56
SMCO4-205ENST00000529714 PARD3Q8TEW0 1356 aa18.57■□□□□ 0.56
SMCO4-205ENST00000529714 NUTM2GQ5VZR2 741 aa18.56■□□□□ 0.56
SMCO4-205ENST00000529714 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
SMCO4-205ENST00000529714 MORC1Q86VD1 984 aa18.56■□□□□ 0.56
SMCO4-205ENST00000529714 KCNH5Q8NCM2 988 aa18.56■□□□□ 0.56
SMCO4-205ENST00000529714 NFAT5O94916 1531 aa18.55■□□□□ 0.56
SMCO4-205ENST00000529714 RALBP1Q15311 655 aa18.55■□□□□ 0.56
SMCO4-205ENST00000529714 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
SMCO4-205ENST00000529714 PRKRIP1Q9H875 184 aaPredicted RBP18.54■□□□□ 0.56
SMCO4-205ENST00000529714 ANP32CO43423 234 aa18.52■□□□□ 0.56
SMCO4-205ENST00000529714 GCP02774 474 aa18.52■□□□□ 0.56
SMCO4-205ENST00000529714 SPATA31A6Q5VVP1 1343 aa18.51■□□□□ 0.55
SMCO4-205ENST00000529714 CPDO75976 1380 aa18.5■□□□□ 0.55
SMCO4-205ENST00000529714 SMG6Q86US8 1419 aaKnown RBP18.49■□□□□ 0.55
SMCO4-205ENST00000529714 MAP2P11137 1827 aaKnown RBP18.49■□□□□ 0.55
SMCO4-205ENST00000529714 CABLES1Q8TDN4 633 aa18.49■□□□□ 0.55
SMCO4-205ENST00000529714 KIF24Q5T7B8 1368 aa18.49■□□□□ 0.55
SMCO4-205ENST00000529714 LTN1O94822 1766 aa18.49■□□□□ 0.55
SMCO4-205ENST00000529714 ABCC6O95255 1503 aa18.49■□□□□ 0.55
SMCO4-205ENST00000529714 HAP1P54257 671 aaPredicted RBP18.48■□□□□ 0.55
SMCO4-205ENST00000529714 CNGB1Q14028 1251 aaPredicted RBP18.48■□□□□ 0.55
SMCO4-205ENST00000529714 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
SMCO4-205ENST00000529714 RTL1A6NKG5 1358 aa18.46■□□□□ 0.55
SMCO4-205ENST00000529714 PPP2R1AP30153 589 aa18.46■□□□□ 0.55
SMCO4-205ENST00000529714 TNNT2P45379 298 aaPredicted RBP18.46■□□□□ 0.55
SMCO4-205ENST00000529714 ARHGEF25Q86VW2 580 aa18.46■□□□□ 0.55
SMCO4-205ENST00000529714 SOX12O15370 315 aa18.45■□□□□ 0.54
SMCO4-205ENST00000529714 POLKQ9UBT6 870 aa18.45■□□□□ 0.54
SMCO4-205ENST00000529714 MAP3K19Q56UN5 1328 aa18.45■□□□□ 0.54
SMCO4-205ENST00000529714 CDK12Q9NYV4 1490 aaPredicted RBP18.45■□□□□ 0.54
SMCO4-205ENST00000529714 KIAA0232Q92628 1395 aa18.44■□□□□ 0.54
SMCO4-205ENST00000529714 PLEKHG5O94827 1062 aa18.44■□□□□ 0.54
SMCO4-205ENST00000529714 PEAK1Q9H792 1746 aa18.43■□□□□ 0.54
SMCO4-205ENST00000529714 COL14A1Q05707 1796 aaKnown RBP18.43■□□□□ 0.54
SMCO4-205ENST00000529714 FBLN1P23142 703 aa18.43■□□□□ 0.54
SMCO4-205ENST00000529714 RRS1Q15050 365 aaKnown RBP18.43■□□□□ 0.54
SMCO4-205ENST00000529714 FLT4P35916 1363 aa18.42■□□□□ 0.54
SMCO4-205ENST00000529714 COL18A1P39060 1754 aa18.42■□□□□ 0.54
SMCO4-205ENST00000529714 LMO7Q8WWI1 1683 aa18.42■□□□□ 0.54
SMCO4-205ENST00000529714 ZC3H6P61129 1189 aaKnown RBP18.42■□□□□ 0.54
SMCO4-205ENST00000529714 EMILIN1Q9Y6C2 1016 aa18.42■□□□□ 0.54
SMCO4-205ENST00000529714 INSRP06213 1382 aa18.42■□□□□ 0.54
SMCO4-205ENST00000529714 LRP6O75581 1613 aa18.41■□□□□ 0.54
SMCO4-205ENST00000529714 MTHFSP49914 203 aa18.41■□□□□ 0.54
SMCO4-205ENST00000529714 PRDM11Q9NQV5 511 aa18.41■□□□□ 0.54
SMCO4-205ENST00000529714 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
SMCO4-205ENST00000529714 NUTM2BA6NNL0 878 aaPredicted RBP18.4■□□□□ 0.54
SMCO4-205ENST00000529714 NUTM2EB1AL46 878 aaPredicted RBP18.4■□□□□ 0.54
SMCO4-205ENST00000529714 AMPHP49418 695 aa18.4■□□□□ 0.54
SMCO4-205ENST00000529714 NUTM2AQ8IVF1 878 aaPredicted RBP18.4■□□□□ 0.54
SMCO4-205ENST00000529714 IP6K1Q92551 441 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms