RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 FOXO3O43524 673 aa11.2□□□□□ -0.62
PABPC4-223ENST00000529216 RGPD8O14715 1765 aaPredicted RBP11.2□□□□□ -0.62
PABPC4-223ENST00000529216 SBNO1A3KN83 1393 aa11.19□□□□□ -0.62
PABPC4-223ENST00000529216 PSME1Q06323 249 aa11.19□□□□□ -0.62
PABPC4-223ENST00000529216 ROBO1Q9Y6N7 1651 aa11.19□□□□□ -0.62
PABPC4-223ENST00000529216 AHDC1Q5TGY3 1603 aaPredicted RBP11.19□□□□□ -0.62
PABPC4-223ENST00000529216 PARD3Q8TEW0 1356 aa11.18□□□□□ -0.62
PABPC4-223ENST00000529216 NHSL1Q5SYE7 1610 aa11.18□□□□□ -0.62
PABPC4-223ENST00000529216 UBAP1LF5GYI3 381 aa11.18□□□□□ -0.62
PABPC4-223ENST00000529216 ANP32CO43423 234 aa11.18□□□□□ -0.62
PABPC4-223ENST00000529216 KRT28Q7Z3Y7 464 aa11.18□□□□□ -0.62
PABPC4-223ENST00000529216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.18□□□□□ -0.62
PABPC4-223ENST00000529216 OVOS2A0A0J9YW53 1432 aa11.18□□□□□ -0.62
PABPC4-223ENST00000529216 OVOS2Q6IE36 1432 aa11.18□□□□□ -0.62
PABPC4-223ENST00000529216 USP31Q70CQ4 1352 aa11.17□□□□□ -0.62
PABPC4-223ENST00000529216 SOS2Q07890 1332 aaPredicted RBP11.17□□□□□ -0.62
PABPC4-223ENST00000529216 FYB1O15117 783 aa11.17□□□□□ -0.62
PABPC4-223ENST00000529216 RALBP1Q15311 655 aa11.17□□□□□ -0.62
PABPC4-223ENST00000529216 PRKRIP1Q9H875 184 aaPredicted RBP11.17□□□□□ -0.62
PABPC4-223ENST00000529216 TRPM3Q9HCF6 1732 aaPredicted RBP11.17□□□□□ -0.62
PABPC4-223ENST00000529216 TNS3Q68CZ2 1445 aa11.17□□□□□ -0.62
PABPC4-223ENST00000529216 CC2D1BQ5T0F9 858 aaKnown RBP11.16□□□□□ -0.62
PABPC4-223ENST00000529216 NME9Q86XW9 330 aa11.16□□□□□ -0.62
PABPC4-223ENST00000529216 PIK3C2AO00443 1686 aa11.16□□□□□ -0.62
PABPC4-223ENST00000529216 USP54Q70EL1 1684 aa11.15□□□□□ -0.62
PABPC4-223ENST00000529216 XPCQ01831 940 aaPredicted RBP11.15□□□□□ -0.62
PABPC4-223ENST00000529216 DDX17Q92841 729 aaKnown RBP11.15□□□□□ -0.62
PABPC4-223ENST00000529216 GGNBP2Q9H3C7 697 aa11.15□□□□□ -0.62
PABPC4-223ENST00000529216 ARHGEF10O15013 1369 aa11.15□□□□□ -0.63
PABPC4-223ENST00000529216 KIF20BQ96Q89 1820 aa11.14□□□□□ -0.63
PABPC4-223ENST00000529216 SPATA31A3Q5VYP0 1347 aa11.14□□□□□ -0.63
PABPC4-223ENST00000529216 SCAF1Q9H7N4 1312 aaKnown RBP11.14□□□□□ -0.63
PABPC4-223ENST00000529216 PAK3O75914 559 aaPredicted RBP11.14□□□□□ -0.63
PABPC4-223ENST00000529216 MORC1Q86VD1 984 aa11.14□□□□□ -0.63
PABPC4-223ENST00000529216 COG3Q96JB2 828 aa11.14□□□□□ -0.63
PABPC4-223ENST00000529216 MED1Q15648 1581 aaPredicted RBP11.14□□□□□ -0.63
PABPC4-223ENST00000529216 ALS2Q96Q42 1657 aa11.14□□□□□ -0.63
PABPC4-223ENST00000529216 ANKRD26Q9UPS8 1709 aa11.13□□□□□ -0.63
PABPC4-223ENST00000529216 PIP4K2BP78356 416 aa11.13□□□□□ -0.63
PABPC4-223ENST00000529216 ABTB2Q8N961 1025 aa11.13□□□□□ -0.63
PABPC4-223ENST00000529216 USP19O94966 1318 aa11.12□□□□□ -0.63
PABPC4-223ENST00000529216 MYBBP1AQ9BQG0 1328 aaKnown RBP11.12□□□□□ -0.63
PABPC4-223ENST00000529216 NLRP13Q86W25 1043 aa11.12□□□□□ -0.63
PABPC4-223ENST00000529216 SLIT3O75094 1523 aa11.12□□□□□ -0.63
PABPC4-223ENST00000529216 COL16A1Q07092 1604 aaPredicted RBP11.12□□□□□ -0.63
PABPC4-223ENST00000529216 AATKQ6ZMQ8 1374 aa11.12□□□□□ -0.63
PABPC4-223ENST00000529216 NLRP6P59044 892 aa11.11□□□□□ -0.63
PABPC4-223ENST00000529216 CNGB1Q14028 1251 aaPredicted RBP11.11□□□□□ -0.63
PABPC4-223ENST00000529216 LRRC59Q96AG4 307 aaKnown RBP11.11□□□□□ -0.63
PABPC4-223ENST00000529216 ZRANB1Q9UGI0 708 aa11.11□□□□□ -0.63
PABPC4-223ENST00000529216 SMG6Q86US8 1419 aaKnown RBP11.1□□□□□ -0.63
PABPC4-223ENST00000529216 POTEDQ86YR6 584 aa11.1□□□□□ -0.63
PABPC4-223ENST00000529216 MIER1Q8N108 512 aa11.1□□□□□ -0.63
PABPC4-223ENST00000529216 PPP2R1AP30153 589 aa11.09□□□□□ -0.63
PABPC4-223ENST00000529216 NUTM2GQ5VZR2 741 aa11.09□□□□□ -0.63
PABPC4-223ENST00000529216 LMOD2Q6P5Q4 547 aa11.09□□□□□ -0.63
PABPC4-223ENST00000529216 KCNH5Q8NCM2 988 aa11.09□□□□□ -0.63
PABPC4-223ENST00000529216 PHLPP1O60346 1717 aa11.09□□□□□ -0.63
PABPC4-223ENST00000529216 MARF1Q9Y4F3 1742 aaKnown RBP11.09□□□□□ -0.63
PABPC4-223ENST00000529216 NFAT5O94916 1531 aa11.09□□□□□ -0.63
PABPC4-223ENST00000529216 PNPLA6Q8IY17 1366 aa11.08□□□□□ -0.64
PABPC4-223ENST00000529216 CCER2I3L3R5 266 aa11.08□□□□□ -0.64
PABPC4-223ENST00000529216 COL22A1Q8NFW1 1626 aaPredicted RBP11.08□□□□□ -0.64
PABPC4-223ENST00000529216 KIF24Q5T7B8 1368 aa11.07□□□□□ -0.64
PABPC4-223ENST00000529216 TNNT2P45379 298 aaPredicted RBP11.07□□□□□ -0.64
PABPC4-223ENST00000529216 CRYBG1Q9Y4K1 1723 aa11.06□□□□□ -0.64
PABPC4-223ENST00000529216 CDK12Q9NYV4 1490 aaPredicted RBP11.06□□□□□ -0.64
PABPC4-223ENST00000529216 PHRF1Q9P1Y6 1649 aaKnown RBP11.06□□□□□ -0.64
PABPC4-223ENST00000529216 RTL1A6NKG5 1358 aa11.06□□□□□ -0.64
PABPC4-223ENST00000529216 GCP02774 474 aa11.06□□□□□ -0.64
PABPC4-223ENST00000529216 POLKQ9UBT6 870 aa11.06□□□□□ -0.64
PABPC4-223ENST00000529216 JCADQ9P266 1359 aa11.05□□□□□ -0.64
PABPC4-223ENST00000529216 ABCC6O95255 1503 aa11.04□□□□□ -0.64
PABPC4-223ENST00000529216 CPDO75976 1380 aa11.04□□□□□ -0.64
PABPC4-223ENST00000529216 INSRP06213 1382 aa11.04□□□□□ -0.64
PABPC4-223ENST00000529216 MTHFSP49914 203 aa11.04□□□□□ -0.64
PABPC4-223ENST00000529216 RRS1Q15050 365 aaKnown RBP11.04□□□□□ -0.64
PABPC4-223ENST00000529216 EMILIN1Q9Y6C2 1016 aa11.04□□□□□ -0.64
PABPC4-223ENST00000529216 SHPRHQ149N8 1683 aa11.04□□□□□ -0.64
PABPC4-223ENST00000529216 MAP3K19Q56UN5 1328 aa11.04□□□□□ -0.64
PABPC4-223ENST00000529216 ABCA3Q99758 1704 aa11.04□□□□□ -0.64
PABPC4-223ENST00000529216 FLT4P35916 1363 aa11.03□□□□□ -0.64
PABPC4-223ENST00000529216 SOX12O15370 315 aa11.03□□□□□ -0.64
PABPC4-223ENST00000529216 HSPA1LP34931 641 aa11.03□□□□□ -0.64
PABPC4-223ENST00000529216 ARHGEF25Q86VW2 580 aa11.03□□□□□ -0.64
PABPC4-223ENST00000529216 CFAP53Q96M91 514 aa11.03□□□□□ -0.64
PABPC4-223ENST00000529216 MRS2Q9HD23 443 aa11.03□□□□□ -0.64
PABPC4-223ENST00000529216 COL3A1P02461 1466 aaPredicted RBP11.03□□□□□ -0.64
PABPC4-223ENST00000529216 FBLN1P23142 703 aa11.02□□□□□ -0.65
PABPC4-223ENST00000529216 CABLES1Q8TDN4 633 aa11.02□□□□□ -0.65
PABPC4-223ENST00000529216 BLMP54132 1417 aaPredicted RBP11.01□□□□□ -0.65
PABPC4-223ENST00000529216 HAP1P54257 671 aaPredicted RBP11.01□□□□□ -0.65
PABPC4-223ENST00000529216 CCDC184Q52MB2 194 aa11.01□□□□□ -0.65
PABPC4-223ENST00000529216 FBXO41Q8TF61 875 aa11.01□□□□□ -0.65
PABPC4-223ENST00000529216 SPATA31A6Q5VVP1 1343 aa11.01□□□□□ -0.65
PABPC4-223ENST00000529216 KIAA0232Q92628 1395 aa11.01□□□□□ -0.65
PABPC4-223ENST00000529216 PEAK1Q9H792 1746 aa11.01□□□□□ -0.65
PABPC4-223ENST00000529216 PPM1GO15355 546 aaPredicted RBP11□□□□□ -0.65
PABPC4-223ENST00000529216 HOXC9P31274 260 aa11□□□□□ -0.65
PABPC4-223ENST00000529216 AMPHP49418 695 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms