RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 SMG6Q86US8 1419 aaKnown RBP30.99■■■□□ 2.55
LTBP3-212ENST00000529189 POLR3AO14802 1390 aaPredicted RBP30.97■■■□□ 2.55
LTBP3-212ENST00000529189 EDC4Q6P2E9 1401 aaKnown RBP30.97■■■□□ 2.55
LTBP3-212ENST00000529189 MST1RQ04912 1400 aa30.96■■■□□ 2.55
LTBP3-212ENST00000529189 NRKQ7Z2Y5 1582 aa30.96■■■□□ 2.55
LTBP3-212ENST00000529189 NGDNQ8NEJ9 315 aaKnown RBP30.96■■■□□ 2.55
LTBP3-212ENST00000529189 ZNF692Q9BU19 519 aaPredicted RBP30.96■■■□□ 2.55
LTBP3-212ENST00000529189 C1orf167Q5SNV9 1468 aa30.95■■■□□ 2.55
LTBP3-212ENST00000529189 ESCO1Q5FWF5 840 aa30.95■■■□□ 2.54
LTBP3-212ENST00000529189 KIF20BQ96Q89 1820 aa30.95■■■□□ 2.54
LTBP3-212ENST00000529189 USP6P35125 1406 aa30.94■■■□□ 2.54
LTBP3-212ENST00000529189 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.94■■■□□ 2.54
LTBP3-212ENST00000529189 PHF8Q9UPP1 1060 aa30.94■■■□□ 2.54
LTBP3-212ENST00000529189 LTBP4Q8N2S1 1624 aa30.94■■■□□ 2.54
LTBP3-212ENST00000529189 CADPS2Q86UW7 1296 aa30.94■■■□□ 2.54
LTBP3-212ENST00000529189 NSD2O96028 1365 aa30.93■■■□□ 2.54
LTBP3-212ENST00000529189 WDR43Q15061 677 aaKnown RBP eCLIP30.92■■■□□ 2.54
LTBP3-212ENST00000529189 ORAI2Q96SN7 254 aa30.92■■■□□ 2.54
LTBP3-212ENST00000529189 NUDCQ9Y266 331 aa30.92■■■□□ 2.54
LTBP3-212ENST00000529189 SENP3-EIF4A1A0A087X0R7 540 aa30.9■■■□□ 2.54
LTBP3-212ENST00000529189 FYB1O15117 783 aa30.9■■■□□ 2.54
LTBP3-212ENST00000529189 MORC1Q86VD1 984 aa30.9■■■□□ 2.54
LTBP3-212ENST00000529189 ANKRD26Q9UPS8 1709 aa30.9■■■□□ 2.54
LTBP3-212ENST00000529189 GGNBP2Q9H3C7 697 aa30.89■■■□□ 2.54
LTBP3-212ENST00000529189 ADAMTS8Q9UP79 889 aa30.88■■■□□ 2.53
LTBP3-212ENST00000529189 SSH2Q76I76 1423 aa30.87■■■□□ 2.53
LTBP3-212ENST00000529189 KIF1AQ12756 1690 aa30.87■■■□□ 2.53
LTBP3-212ENST00000529189 TTC21BQ7Z4L5 1316 aa30.86■■■□□ 2.53
LTBP3-212ENST00000529189 NME9Q86XW9 330 aa30.85■■■□□ 2.53
LTBP3-212ENST00000529189 TNNT2P45379 298 aaPredicted RBP30.81■■■□□ 2.52
LTBP3-212ENST00000529189 PDE3BQ13370 1112 aa30.81■■■□□ 2.52
LTBP3-212ENST00000529189 ZRANB1Q9UGI0 708 aa30.8■■■□□ 2.52
LTBP3-212ENST00000529189 FOXO3O43524 673 aa30.79■■■□□ 2.52
LTBP3-212ENST00000529189 SALL2Q9Y467 1007 aaPredicted RBP30.78■■■□□ 2.52
LTBP3-212ENST00000529189 TTC21AQ8NDW8 1320 aa30.77■■■□□ 2.52
LTBP3-212ENST00000529189 PSME1Q06323 249 aa30.77■■■□□ 2.52
LTBP3-212ENST00000529189 PIK3C2AO00443 1686 aa30.77■■■□□ 2.52
LTBP3-212ENST00000529189 SLAIN2Q9P270 581 aa30.75■■■□□ 2.51
LTBP3-212ENST00000529189 SHPRHQ149N8 1683 aa30.75■■■□□ 2.51
LTBP3-212ENST00000529189 XPCQ01831 940 aaPredicted RBP30.74■■■□□ 2.51
LTBP3-212ENST00000529189 PAK3O75914 559 aaPredicted RBP30.73■■■□□ 2.51
LTBP3-212ENST00000529189 COG3Q96JB2 828 aa30.73■■■□□ 2.51
LTBP3-212ENST00000529189 OVOS2A0A0J9YW53 1432 aa30.72■■■□□ 2.51
LTBP3-212ENST00000529189 OVOS2Q6IE36 1432 aa30.72■■■□□ 2.51
LTBP3-212ENST00000529189 BRINP3Q76B58 766 aa30.72■■■□□ 2.51
LTBP3-212ENST00000529189 ERICH6BQ5W0A0 696 aa30.71■■■□□ 2.51
LTBP3-212ENST00000529189 TRPM3Q9HCF6 1732 aaPredicted RBP30.71■■■□□ 2.51
LTBP3-212ENST00000529189 IRX6P78412 446 aaPredicted RBP30.7■■■□□ 2.51
LTBP3-212ENST00000529189 DDX17Q92841 729 aaKnown RBP30.7■■■□□ 2.5
LTBP3-212ENST00000529189 KRT28Q7Z3Y7 464 aa30.68■■■□□ 2.5
LTBP3-212ENST00000529189 CFAP53Q96M91 514 aa30.68■■■□□ 2.5
LTBP3-212ENST00000529189 MTHFSP49914 203 aa30.67■■■□□ 2.5
LTBP3-212ENST00000529189 MARF1Q9Y4F3 1742 aaKnown RBP30.66■■■□□ 2.5
LTBP3-212ENST00000529189 USP31Q70CQ4 1352 aa30.66■■■□□ 2.5
LTBP3-212ENST00000529189 ABTB2Q8N961 1025 aa30.66■■■□□ 2.5
LTBP3-212ENST00000529189 NPHP3Q7Z494 1330 aa30.66■■■□□ 2.5
LTBP3-212ENST00000529189 NUTM2GQ5VZR2 741 aa30.65■■■□□ 2.5
LTBP3-212ENST00000529189 RNF123Q5XPI4 1314 aa30.65■■■□□ 2.5
LTBP3-212ENST00000529189 USP54Q70EL1 1684 aa30.65■■■□□ 2.5
LTBP3-212ENST00000529189 FBLN1P23142 703 aa30.65■■■□□ 2.5
LTBP3-212ENST00000529189 NLRP6P59044 892 aa30.63■■■□□ 2.49
LTBP3-212ENST00000529189 PXDNQ92626 1479 aa30.63■■■□□ 2.49
LTBP3-212ENST00000529189 CCDC146Q8IYE0 955 aa30.63■■■□□ 2.49
LTBP3-212ENST00000529189 CDCA7LQ96GN5 454 aa30.61■■■□□ 2.49
LTBP3-212ENST00000529189 MAP2P11137 1827 aaKnown RBP30.6■■■□□ 2.49
LTBP3-212ENST00000529189 AATKQ6ZMQ8 1374 aa30.6■■■□□ 2.49
LTBP3-212ENST00000529189 ALS2Q96Q42 1657 aa30.59■■■□□ 2.49
LTBP3-212ENST00000529189 ZNF521Q96K83 1311 aa30.58■■■□□ 2.49
LTBP3-212ENST00000529189 SOX12O15370 315 aa30.57■■■□□ 2.48
LTBP3-212ENST00000529189 ROBO1Q9Y6N7 1651 aa30.57■■■□□ 2.48
LTBP3-212ENST00000529189 NHSL1Q5SYE7 1610 aa30.57■■■□□ 2.48
LTBP3-212ENST00000529189 LMOD2Q6P5Q4 547 aa30.57■■■□□ 2.48
LTBP3-212ENST00000529189 POLKQ9UBT6 870 aa30.57■■■□□ 2.48
LTBP3-212ENST00000529189 SBNO1A3KN83 1393 aa30.57■■■□□ 2.48
LTBP3-212ENST00000529189 NGEFQ8N5V2 710 aa30.56■■■□□ 2.48
LTBP3-212ENST00000529189 APAF1O14727 1248 aa30.55■■■□□ 2.48
LTBP3-212ENST00000529189 RRS1Q15050 365 aaKnown RBP30.55■■■□□ 2.48
LTBP3-212ENST00000529189 EMILIN1Q9Y6C2 1016 aa30.54■■■□□ 2.48
LTBP3-212ENST00000529189 TNS3Q68CZ2 1445 aa30.54■■■□□ 2.48
LTBP3-212ENST00000529189 RCAN3Q9UKA8 241 aa30.54■■■□□ 2.48
LTBP3-212ENST00000529189 PPM1GO15355 546 aaPredicted RBP30.52■■■□□ 2.48
LTBP3-212ENST00000529189 COL3A1P02461 1466 aaPredicted RBP30.52■■■□□ 2.48
LTBP3-212ENST00000529189 PPP4R2Q9NY27 417 aa30.52■■■□□ 2.48
LTBP3-212ENST00000529189 SOS2Q07890 1332 aaPredicted RBP30.51■■■□□ 2.48
LTBP3-212ENST00000529189 GOLGA2Q08379 1002 aa30.5■■■□□ 2.47
LTBP3-212ENST00000529189 CDK12Q9NYV4 1490 aaPredicted RBP30.49■■■□□ 2.47
LTBP3-212ENST00000529189 RUNDC1Q96C34 613 aa30.49■■■□□ 2.47
LTBP3-212ENST00000529189 SPATA31A3Q5VYP0 1347 aa30.49■■■□□ 2.47
LTBP3-212ENST00000529189 IQSEC2Q5JU85 1478 aa30.49■■■□□ 2.47
LTBP3-212ENST00000529189 PLEKHG5O94827 1062 aa30.48■■■□□ 2.47
LTBP3-212ENST00000529189 PEAK1Q9H792 1746 aa30.48■■■□□ 2.47
LTBP3-212ENST00000529189 PNPLA6Q8IY17 1366 aa30.48■■■□□ 2.47
LTBP3-212ENST00000529189 SLIT3O75094 1523 aa30.47■■■□□ 2.47
LTBP3-212ENST00000529189 NFAT5O94916 1531 aa30.47■■■□□ 2.47
LTBP3-212ENST00000529189 TOM1O60784 492 aa30.46■■■□□ 2.47
LTBP3-212ENST00000529189 USP19O94966 1318 aa30.46■■■□□ 2.47
LTBP3-212ENST00000529189 MED1Q15648 1581 aaPredicted RBP30.45■■■□□ 2.47
LTBP3-212ENST00000529189 MAP3K19Q56UN5 1328 aa30.45■■■□□ 2.47
LTBP3-212ENST00000529189 RRP1P56182 461 aaKnown RBP30.45■■■□□ 2.46
LTBP3-212ENST00000529189 AHDC1Q5TGY3 1603 aaPredicted RBP30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms