RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 KIF20AO95235 890 aa10.21□□□□□ -0.77
C11orf88-203ENST00000529167 ZSCAN20P17040 1043 aaPredicted RBP10.2□□□□□ -0.78
C11orf88-203ENST00000529167 ZHX1Q9UKY1 873 aaPredicted RBP10.2□□□□□ -0.78
C11orf88-203ENST00000529167 KDM2BQ8NHM5 1336 aa10.2□□□□□ -0.78
C11orf88-203ENST00000529167 CFAP65Q6ZU64 1925 aaKnown RBP10.2□□□□□ -0.78
C11orf88-203ENST00000529167 LRP5O75197 1615 aa10.2□□□□□ -0.78
C11orf88-203ENST00000529167 ADGRB3O60242 1522 aa10.2□□□□□ -0.78
C11orf88-203ENST00000529167 VGFO15240 615 aaPredicted RBP10.19□□□□□ -0.78
C11orf88-203ENST00000529167 PPP4R3BQ5MIZ7 849 aa10.19□□□□□ -0.78
C11orf88-203ENST00000529167 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.19□□□□□ -0.78
C11orf88-203ENST00000529167 ATAD2Q6PL18 1390 aa10.19□□□□□ -0.78
C11orf88-203ENST00000529167 KTN1Q86UP2 1357 aaKnown RBP10.19□□□□□ -0.78
C11orf88-203ENST00000529167 DUOX2Q9NRD8 1548 aa10.19□□□□□ -0.78
C11orf88-203ENST00000529167 HSP90B1P14625 803 aaKnown RBP10.19□□□□□ -0.78
C11orf88-203ENST00000529167 LMTK2Q8IWU2 1503 aa10.18□□□□□ -0.78
C11orf88-203ENST00000529167 RBM6P78332 1123 aaKnown RBP10.18□□□□□ -0.78
C11orf88-203ENST00000529167 NHSL1Q5SYE7 1610 aa10.18□□□□□ -0.78
C11orf88-203ENST00000529167 AFF2P51816 1311 aa10.18□□□□□ -0.78
C11orf88-203ENST00000529167 CDK11BP21127 795 aaKnown RBP10.18□□□□□ -0.78
C11orf88-203ENST00000529167 EIF4G2P78344 907 aaKnown RBP eCLIP10.18□□□□□ -0.78
C11orf88-203ENST00000529167 ZRANB1Q9UGI0 708 aa10.18□□□□□ -0.78
C11orf88-203ENST00000529167 WWC1Q8IX03 1113 aa10.18□□□□□ -0.78
C11orf88-203ENST00000529167 RGS22Q8NE09 1264 aa10.18□□□□□ -0.78
C11orf88-203ENST00000529167 GTPBP4Q9BZE4 634 aaKnown RBP10.18□□□□□ -0.78
C11orf88-203ENST00000529167 GRPEL1Q9HAV7 217 aa10.18□□□□□ -0.78
C11orf88-203ENST00000529167 RCAN3Q9UKA8 241 aa10.18□□□□□ -0.78
C11orf88-203ENST00000529167 TMED8Q6PL24 325 aaPredicted RBP10.17□□□□□ -0.78
C11orf88-203ENST00000529167 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.17□□□□□ -0.78
C11orf88-203ENST00000529167 LRPPRCP42704 1394 aaKnown RBP10.17□□□□□ -0.78
C11orf88-203ENST00000529167 TSPY4P0CV99 314 aa10.16□□□□□ -0.78
C11orf88-203ENST00000529167 TSPY10P0CW01 314 aa10.16□□□□□ -0.78
C11orf88-203ENST00000529167 RBM33Q96EV2 1170 aaKnown RBP10.16□□□□□ -0.78
C11orf88-203ENST00000529167 PLEKHG1Q9ULL1 1385 aa10.16□□□□□ -0.78
C11orf88-203ENST00000529167 PNISRQ8TF01 805 aaKnown RBP10.15□□□□□ -0.78
C11orf88-203ENST00000529167 SLC26A8Q96RN1 970 aa10.15□□□□□ -0.78
C11orf88-203ENST00000529167 USP19O94966 1318 aa10.15□□□□□ -0.78
C11orf88-203ENST00000529167 ZFYVE9O95405 1425 aa10.15□□□□□ -0.78
C11orf88-203ENST00000529167 NOS1P29475 1434 aa10.15□□□□□ -0.78
C11orf88-203ENST00000529167 LETM1O95202 739 aaPredicted RBP10.15□□□□□ -0.78
C11orf88-203ENST00000529167 DCCP43146 1447 aa10.15□□□□□ -0.78
C11orf88-203ENST00000529167 TRIM44Q96DX7 344 aaPredicted RBP10.15□□□□□ -0.78
C11orf88-203ENST00000529167 ERBINQ96RT1 1412 aa10.15□□□□□ -0.79
C11orf88-203ENST00000529167 TAF3Q5VWG9 929 aa10.15□□□□□ -0.79
C11orf88-203ENST00000529167 DYNC1I1O14576 645 aa10.14□□□□□ -0.79
C11orf88-203ENST00000529167 PDE3BQ13370 1112 aa10.14□□□□□ -0.79
C11orf88-203ENST00000529167 CENPQQ7L2Z9 268 aaPredicted RBP10.14□□□□□ -0.79
C11orf88-203ENST00000529167 CADPS2Q86UW7 1296 aa10.14□□□□□ -0.79
C11orf88-203ENST00000529167 CCDC94Q9BW85 323 aaPredicted RBP10.14□□□□□ -0.79
C11orf88-203ENST00000529167 FAM13BQ9NYF5 915 aa10.14□□□□□ -0.79
C11orf88-203ENST00000529167 ASXL1Q8IXJ9 1541 aa10.14□□□□□ -0.79
C11orf88-203ENST00000529167 MCM4P33991 863 aa10.13□□□□□ -0.79
C11orf88-203ENST00000529167 TNNT2P45379 298 aaPredicted RBP10.13□□□□□ -0.79
C11orf88-203ENST00000529167 BECN1Q14457 450 aa10.13□□□□□ -0.79
C11orf88-203ENST00000529167 CCDC125Q86Z20 511 aa10.13□□□□□ -0.79
C11orf88-203ENST00000529167 SLC52A1Q9NWF4 448 aa10.13□□□□□ -0.79
C11orf88-203ENST00000529167 CFAP44Q96MT7 982 aa10.13□□□□□ -0.79
C11orf88-203ENST00000529167 PIK3R4Q99570 1358 aa10.13□□□□□ -0.79
C11orf88-203ENST00000529167 IDI1Q13907 227 aa10.13□□□□□ -0.79
C11orf88-203ENST00000529167 ZSCAN30Q86W11 494 aa10.13□□□□□ -0.79
C11orf88-203ENST00000529167 PPP1R9BQ96SB3 815 aa10.13□□□□□ -0.79
C11orf88-203ENST00000529167 QTRT2Q9H974 415 aaKnown RBP10.13□□□□□ -0.79
C11orf88-203ENST00000529167 LAMC1P11047 1609 aa10.12□□□□□ -0.79
C11orf88-203ENST00000529167 SKAP1Q86WV1 359 aa10.12□□□□□ -0.79
C11orf88-203ENST00000529167 FBXO3Q9UK99 471 aa10.12□□□□□ -0.79
C11orf88-203ENST00000529167 BRINP3Q76B58 766 aa10.12□□□□□ -0.79
C11orf88-203ENST00000529167 C19orf44Q9H6X5 657 aa10.12□□□□□ -0.79
C11orf88-203ENST00000529167 SPATA31E1Q6ZUB1 1445 aa10.12□□□□□ -0.79
C11orf88-203ENST00000529167 TBX22Q9Y458 520 aa10.11□□□□□ -0.79
C11orf88-203ENST00000529167 NGLY1Q96IV0 654 aa10.11□□□□□ -0.79
C11orf88-203ENST00000529167 NUTM2BA6NNL0 878 aaPredicted RBP10.1□□□□□ -0.79
C11orf88-203ENST00000529167 NUTM2EB1AL46 878 aaPredicted RBP10.1□□□□□ -0.79
C11orf88-203ENST00000529167 IGSF3O75054 1194 aa10.1□□□□□ -0.79
C11orf88-203ENST00000529167 NUTM2DQ5VT03 806 aaPredicted RBP10.1□□□□□ -0.79
C11orf88-203ENST00000529167 NUTM2AQ8IVF1 878 aaPredicted RBP10.1□□□□□ -0.79
C11orf88-203ENST00000529167 PNPLA6Q8IY17 1366 aa10.1□□□□□ -0.79
C11orf88-203ENST00000529167 TRAK2O60296 914 aa10.1□□□□□ -0.79
C11orf88-203ENST00000529167 CROCC2H7BZ55 1655 aa10.1□□□□□ -0.79
C11orf88-203ENST00000529167 MAPK8IP2Q13387 824 aaPredicted RBP10.1□□□□□ -0.79
C11orf88-203ENST00000529167 STAG3Q9UJ98 1225 aa10.1□□□□□ -0.79
C11orf88-203ENST00000529167 HS1BP3Q53T59 392 aa10.09□□□□□ -0.79
C11orf88-203ENST00000529167 PIAS4Q8N2W9 510 aaPredicted RBP10.09□□□□□ -0.79
C11orf88-203ENST00000529167 ATRNO75882 1429 aa10.09□□□□□ -0.79
C11orf88-203ENST00000529167 ADAMTS13Q76LX8 1427 aa10.09□□□□□ -0.79
C11orf88-203ENST00000529167 KIF7Q2M1P5 1343 aa10.09□□□□□ -0.79
C11orf88-203ENST00000529167 ZNF500O60304 480 aaPredicted RBP10.09□□□□□ -0.79
C11orf88-203ENST00000529167 CCDC173Q0VFZ6 552 aa10.09□□□□□ -0.79
C11orf88-203ENST00000529167 SLC20A2Q08357 652 aa10.08□□□□□ -0.8
C11orf88-203ENST00000529167 ANP32BQ92688 251 aaKnown RBP10.08□□□□□ -0.8
C11orf88-203ENST00000529167 TMEM131LA2VDJ0 1609 aa10.08□□□□□ -0.8
C11orf88-203ENST00000529167 MYO5BQ9ULV0 1848 aa10.08□□□□□ -0.8
C11orf88-203ENST00000529167 MST1RQ04912 1400 aa10.08□□□□□ -0.8
C11orf88-203ENST00000529167 HFM1A2PYH4 1435 aa10.08□□□□□ -0.8
C11orf88-203ENST00000529167 ATF3P18847 181 aa10.08□□□□□ -0.8
C11orf88-203ENST00000529167 FAM43BQ6ZT52 329 aaPredicted RBP10.08□□□□□ -0.8
C11orf88-203ENST00000529167 LRRC59Q96AG4 307 aaKnown RBP10.08□□□□□ -0.8
C11orf88-203ENST00000529167 RIMS2Q9UQ26 1411 aa10.07□□□□□ -0.8
C11orf88-203ENST00000529167 CRBNQ96SW2 442 aa10.07□□□□□ -0.8
C11orf88-203ENST00000529167 RPRD2Q5VT52 1461 aaKnown RBP10.07□□□□□ -0.8
C11orf88-203ENST00000529167 GCC2Q8IWJ2 1684 aa10.07□□□□□ -0.8
C11orf88-203ENST00000529167 XRN1Q8IZH2 1706 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms