RNA–Protein interactions for RNA: ENST00000528935.1

PACS1-207, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-207ENST00000528935 NBPF8Q3BBV2 869 aa20.81■□□□□ 0.92
PACS1-207ENST00000528935 ABCA3Q99758 1704 aa20.81■□□□□ 0.92
PACS1-207ENST00000528935 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.81■□□□□ 0.92
PACS1-207ENST00000528935 FAM83GA6ND36 823 aa20.8■□□□□ 0.92
PACS1-207ENST00000528935 CABP2Q9NPB3 220 aa20.8■□□□□ 0.92
PACS1-207ENST00000528935 TOPAZ1Q8N9V7 1692 aa20.8■□□□□ 0.92
PACS1-207ENST00000528935 QRICH2Q9H0J4 1663 aa20.78■□□□□ 0.92
PACS1-207ENST00000528935 VPS72Q15906 364 aa20.77■□□□□ 0.92
PACS1-207ENST00000528935 RALGAPBQ86X10 1494 aa20.76■□□□□ 0.91
PACS1-207ENST00000528935 TONSLQ96HA7 1378 aa20.76■□□□□ 0.91
PACS1-207ENST00000528935 PPIP5K1Q6PFW1 1433 aa20.76■□□□□ 0.91
PACS1-207ENST00000528935 EVC2Q86UK5 1308 aa20.76■□□□□ 0.91
PACS1-207ENST00000528935 ATAD2Q6PL18 1390 aa20.75■□□□□ 0.91
PACS1-207ENST00000528935 NWD2Q9ULI1 1742 aa20.75■□□□□ 0.91
PACS1-207ENST00000528935 PLCH1Q4KWH8 1693 aa20.74■□□□□ 0.91
PACS1-207ENST00000528935 GLI3P10071 1580 aa20.73■□□□□ 0.91
PACS1-207ENST00000528935 BTG4Q9NY30 223 aa20.73■□□□□ 0.91
PACS1-207ENST00000528935 CABP1Q9NZU7 370 aa20.73■□□□□ 0.91
PACS1-207ENST00000528935 NUTM2GQ5VZR2 741 aa20.72■□□□□ 0.91
PACS1-207ENST00000528935 ABTB2Q8N961 1025 aa20.72■□□□□ 0.91
PACS1-207ENST00000528935 CCDC9Q9Y3X0 531 aaKnown RBP20.72■□□□□ 0.91
PACS1-207ENST00000528935 CRYBG1Q9Y4K1 1723 aa20.72■□□□□ 0.91
PACS1-207ENST00000528935 CARD11Q9BXL7 1154 aa20.71■□□□□ 0.91
PACS1-207ENST00000528935 PRDM11Q9NQV5 511 aa20.71■□□□□ 0.91
PACS1-207ENST00000528935 COL14A1Q05707 1796 aaKnown RBP20.71■□□□□ 0.91
PACS1-207ENST00000528935 BRD4O60885 1362 aaPredicted RBP20.71■□□□□ 0.91
PACS1-207ENST00000528935 ONECUT3O60422 494 aaPredicted RBP20.69■□□□□ 0.9
PACS1-207ENST00000528935 KIAA0232Q92628 1395 aa20.68■□□□□ 0.9
PACS1-207ENST00000528935 NLRP13Q86W25 1043 aa20.67■□□□□ 0.9
PACS1-207ENST00000528935 SEPT12Q8IYM1 358 aa20.67■□□□□ 0.9
PACS1-207ENST00000528935 ZC3H6P61129 1189 aaKnown RBP20.66■□□□□ 0.9
PACS1-207ENST00000528935 SBNO2Q9Y2G9 1366 aa20.66■□□□□ 0.9
PACS1-207ENST00000528935 USP6P35125 1406 aa20.66■□□□□ 0.9
PACS1-207ENST00000528935 NRAPQ86VF7 1730 aa20.66■□□□□ 0.9
PACS1-207ENST00000528935 PHRF1Q9P1Y6 1649 aaKnown RBP20.65■□□□□ 0.9
PACS1-207ENST00000528935 USP19O94966 1318 aa20.65■□□□□ 0.9
PACS1-207ENST00000528935 CHRNA2Q15822 529 aa20.64■□□□□ 0.89
PACS1-207ENST00000528935 ZNF692Q9BU19 519 aaPredicted RBP20.64■□□□□ 0.89
PACS1-207ENST00000528935 SPATA31A5Q5VU36 1347 aa20.63■□□□□ 0.89
PACS1-207ENST00000528935 SPATA31A7Q8IWB4 1347 aa20.63■□□□□ 0.89
PACS1-207ENST00000528935 CCDC125Q86Z20 511 aa20.63■□□□□ 0.89
PACS1-207ENST00000528935 SSH2Q76I76 1423 aa20.61■□□□□ 0.89
PACS1-207ENST00000528935 CPDO75976 1380 aa20.61■□□□□ 0.89
PACS1-207ENST00000528935 GCP02774 474 aa20.61■□□□□ 0.89
PACS1-207ENST00000528935 FAM98CQ17RN3 349 aaKnown RBP20.61■□□□□ 0.89
PACS1-207ENST00000528935 NRKQ7Z2Y5 1582 aa20.6■□□□□ 0.89
PACS1-207ENST00000528935 NLRP6P59044 892 aa20.6■□□□□ 0.89
PACS1-207ENST00000528935 KRT27Q7Z3Y8 459 aa20.6■□□□□ 0.89
PACS1-207ENST00000528935 A0A0G2JS52 829 aa20.59■□□□□ 0.89
PACS1-207ENST00000528935 MYT1Q01538 1121 aa20.59■□□□□ 0.89
PACS1-207ENST00000528935 STRN4Q9NRL3 753 aa20.59■□□□□ 0.89
PACS1-207ENST00000528935 BRWD3Q6RI45 1802 aa20.59■□□□□ 0.89
PACS1-207ENST00000528935 EVA1CP58658 441 aa20.58■□□□□ 0.89
PACS1-207ENST00000528935 CCER1Q8TC90 406 aaPredicted RBP20.58■□□□□ 0.89
PACS1-207ENST00000528935 CPSF1Q10570 1443 aaKnown RBP20.58■□□□□ 0.88
PACS1-207ENST00000528935 SPATA31A1Q5TZJ5 1347 aa20.57■□□□□ 0.88
PACS1-207ENST00000528935 TTC21BQ7Z4L5 1316 aa20.57■□□□□ 0.88
PACS1-207ENST00000528935 TTC21AQ8NDW8 1320 aa20.55■□□□□ 0.88
PACS1-207ENST00000528935 PUS7Q96PZ0 661 aaKnown RBP20.55■□□□□ 0.88
PACS1-207ENST00000528935 KTN1Q86UP2 1357 aaKnown RBP20.55■□□□□ 0.88
PACS1-207ENST00000528935 CAMTA1Q9Y6Y1 1673 aa20.54■□□□□ 0.88
PACS1-207ENST00000528935 BLMP54132 1417 aaPredicted RBP20.54■□□□□ 0.88
PACS1-207ENST00000528935 AKAP12Q02952 1782 aa20.54■□□□□ 0.88
PACS1-207ENST00000528935 SLIT3O75094 1523 aa20.53■□□□□ 0.88
PACS1-207ENST00000528935 EP400Q96L91 3159 aa20.53■□□□□ 0.88
PACS1-207ENST00000528935 PIK3C2AO00443 1686 aa20.53■□□□□ 0.88
PACS1-207ENST00000528935 LMO7Q8WWI1 1683 aa20.52■□□□□ 0.88
PACS1-207ENST00000528935 ST20-MTHFSA0A0A6YYL1 179 aa20.52■□□□□ 0.88
PACS1-207ENST00000528935 SLC24A1O60721 1099 aa20.52■□□□□ 0.88
PACS1-207ENST00000528935 TMC1Q8TDI8 760 aa20.52■□□□□ 0.88
PACS1-207ENST00000528935 TESK2Q96S53 571 aa20.52■□□□□ 0.88
PACS1-207ENST00000528935 CLSPNQ9HAW4 1339 aa20.52■□□□□ 0.87
PACS1-207ENST00000528935 LARP1Q6PKG0 1096 aaKnown RBP20.51■□□□□ 0.87
PACS1-207ENST00000528935 KCNH5Q8NCM2 988 aa20.51■□□□□ 0.87
PACS1-207ENST00000528935 TIMELESSQ9UNS1 1208 aa20.51■□□□□ 0.87
PACS1-207ENST00000528935 AATKQ6ZMQ8 1374 aa20.5■□□□□ 0.87
PACS1-207ENST00000528935 ZBTB7CA1YPR0 619 aa20.5■□□□□ 0.87
PACS1-207ENST00000528935 SF3B2Q13435 895 aaKnown RBP20.5■□□□□ 0.87
PACS1-207ENST00000528935 BARGINQ6ZT62 677 aa20.5■□□□□ 0.87
PACS1-207ENST00000528935 SLC12A5Q9H2X9 1139 aa20.5■□□□□ 0.87
PACS1-207ENST00000528935 USP35Q9P2H5 1018 aa20.5■□□□□ 0.87
PACS1-207ENST00000528935 THSD7AQ9UPZ6 1657 aa20.5■□□□□ 0.87
PACS1-207ENST00000528935 HDGFL2Q7Z4V5 671 aaPredicted RBP20.49■□□□□ 0.87
PACS1-207ENST00000528935 CD163L1Q9NR16 1453 aa20.49■□□□□ 0.87
PACS1-207ENST00000528935 TCP11L2Q8N4U5 519 aa20.48■□□□□ 0.87
PACS1-207ENST00000528935 TERF2IPQ9NYB0 399 aa20.48■□□□□ 0.87
PACS1-207ENST00000528935 COL5A2P05997 1499 aaPredicted RBP20.48■□□□□ 0.87
PACS1-207ENST00000528935 ARHGEF25Q86VW2 580 aa20.47■□□□□ 0.87
PACS1-207ENST00000528935 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.47■□□□□ 0.87
PACS1-207ENST00000528935 THRAP3Q9Y2W1 955 aaKnown RBP20.47■□□□□ 0.87
PACS1-207ENST00000528935 MON2Q7Z3U7 1717 aa20.47■□□□□ 0.87
PACS1-207ENST00000528935 USP31Q70CQ4 1352 aa20.46■□□□□ 0.87
PACS1-207ENST00000528935 FAM182BQ5T319 152 aa20.45■□□□□ 0.86
PACS1-207ENST00000528935 DEFB132Q7Z7B7 95 aa20.45■□□□□ 0.86
PACS1-207ENST00000528935 SOX12O15370 315 aa20.44■□□□□ 0.86
PACS1-207ENST00000528935 ZRANB1Q9UGI0 708 aa20.44■□□□□ 0.86
PACS1-207ENST00000528935 AXIN2Q9Y2T1 843 aa20.44■□□□□ 0.86
PACS1-207ENST00000528935 USP47Q96K76 1375 aa20.44■□□□□ 0.86
PACS1-207ENST00000528935 NINLQ9Y2I6 1382 aa20.44■□□□□ 0.86
PACS1-207ENST00000528935 CRB1P82279 1406 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms