RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 KIF20BQ96Q89 1820 aa16.07■□□□□ 0.16
TM9SF1-207ENST00000528895 USP6P35125 1406 aa16.06■□□□□ 0.16
TM9SF1-207ENST00000528895 ACEP12821 1306 aa16.06■□□□□ 0.16
TM9SF1-207ENST00000528895 RALBP1Q15311 655 aa16.06■□□□□ 0.16
TM9SF1-207ENST00000528895 NGDNQ8NEJ9 315 aaKnown RBP16.06■□□□□ 0.16
TM9SF1-207ENST00000528895 CARD14Q9BXL6 1004 aa16.06■□□□□ 0.16
TM9SF1-207ENST00000528895 PHF8Q9UPP1 1060 aa16.06■□□□□ 0.16
TM9SF1-207ENST00000528895 ESCO1Q5FWF5 840 aa16.05■□□□□ 0.16
TM9SF1-207ENST00000528895 MIER1Q8N108 512 aa16.05■□□□□ 0.16
TM9SF1-207ENST00000528895 PRKRIP1Q9H875 184 aaPredicted RBP16.05■□□□□ 0.16
TM9SF1-207ENST00000528895 ANKRD26Q9UPS8 1709 aa16.05■□□□□ 0.16
TM9SF1-207ENST00000528895 BRD4O60885 1362 aaPredicted RBP16.04■□□□□ 0.16
TM9SF1-207ENST00000528895 PARD3Q8TEW0 1356 aa16.04■□□□□ 0.16
TM9SF1-207ENST00000528895 AMER1Q5JTC6 1135 aaPredicted RBP16.04■□□□□ 0.16
TM9SF1-207ENST00000528895 CC2D1BQ5T0F9 858 aaKnown RBP16.04■□□□□ 0.16
TM9SF1-207ENST00000528895 PMFBP1Q8TBY8 1022 aa16.04■□□□□ 0.16
TM9SF1-207ENST00000528895 CNGB1Q14028 1251 aaPredicted RBP16.02■□□□□ 0.16
TM9SF1-207ENST00000528895 TTC21AQ8NDW8 1320 aa16.01■□□□□ 0.15
TM9SF1-207ENST00000528895 MYBBP1AQ9BQG0 1328 aaKnown RBP16■□□□□ 0.15
TM9SF1-207ENST00000528895 CCER2I3L3R5 266 aa16■□□□□ 0.15
TM9SF1-207ENST00000528895 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.99■□□□□ 0.15
TM9SF1-207ENST00000528895 TTC21BQ7Z4L5 1316 aa15.98■□□□□ 0.15
TM9SF1-207ENST00000528895 PHLPP1O60346 1717 aa15.98■□□□□ 0.15
TM9SF1-207ENST00000528895 POTEAQ6S8J7 498 aa15.98■□□□□ 0.15
TM9SF1-207ENST00000528895 SSH2Q76I76 1423 aa15.98■□□□□ 0.15
TM9SF1-207ENST00000528895 ORAI2Q96SN7 254 aa15.98■□□□□ 0.15
TM9SF1-207ENST00000528895 NPHP3Q7Z494 1330 aa15.97■□□□□ 0.15
TM9SF1-207ENST00000528895 PSME1Q06323 249 aa15.97■□□□□ 0.15
TM9SF1-207ENST00000528895 NCBP3Q53F19 620 aaKnown RBP15.97■□□□□ 0.15
TM9SF1-207ENST00000528895 MORC1Q86VD1 984 aa15.97■□□□□ 0.15
TM9SF1-207ENST00000528895 SLAIN2Q9P270 581 aa15.97■□□□□ 0.15
TM9SF1-207ENST00000528895 USP54Q70EL1 1684 aa15.95■□□□□ 0.14
TM9SF1-207ENST00000528895 FYB1O15117 783 aa15.95■□□□□ 0.14
TM9SF1-207ENST00000528895 NLRP13Q86W25 1043 aa15.95■□□□□ 0.14
TM9SF1-207ENST00000528895 COG3Q96JB2 828 aa15.95■□□□□ 0.14
TM9SF1-207ENST00000528895 GGNBP2Q9H3C7 697 aa15.95■□□□□ 0.14
TM9SF1-207ENST00000528895 PIK3C2AO00443 1686 aa15.95■□□□□ 0.14
TM9SF1-207ENST00000528895 TRPM3Q9HCF6 1732 aaPredicted RBP15.94■□□□□ 0.14
TM9SF1-207ENST00000528895 NME9Q86XW9 330 aa15.94■□□□□ 0.14
TM9SF1-207ENST00000528895 COL16A1Q07092 1604 aaPredicted RBP15.94■□□□□ 0.14
TM9SF1-207ENST00000528895 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
TM9SF1-207ENST00000528895 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
TM9SF1-207ENST00000528895 FOXO3O43524 673 aa15.93■□□□□ 0.14
TM9SF1-207ENST00000528895 PAK3O75914 559 aaPredicted RBP15.93■□□□□ 0.14
TM9SF1-207ENST00000528895 BRINP3Q76B58 766 aa15.93■□□□□ 0.14
TM9SF1-207ENST00000528895 NHSL1Q5SYE7 1610 aa15.93■□□□□ 0.14
TM9SF1-207ENST00000528895 SBNO1A3KN83 1393 aa15.92■□□□□ 0.14
TM9SF1-207ENST00000528895 USP31Q70CQ4 1352 aa15.92■□□□□ 0.14
TM9SF1-207ENST00000528895 JCADQ9P266 1359 aa15.92■□□□□ 0.14
TM9SF1-207ENST00000528895 PXDNQ92626 1479 aa15.91■□□□□ 0.14
TM9SF1-207ENST00000528895 KCNA4P22459 653 aa15.91■□□□□ 0.14
TM9SF1-207ENST00000528895 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
TM9SF1-207ENST00000528895 KRT28Q7Z3Y7 464 aa15.91■□□□□ 0.14
TM9SF1-207ENST00000528895 MRS2Q9HD23 443 aa15.91■□□□□ 0.14
TM9SF1-207ENST00000528895 TNS3Q68CZ2 1445 aa15.9■□□□□ 0.14
TM9SF1-207ENST00000528895 ALS2Q96Q42 1657 aa15.89■□□□□ 0.13
TM9SF1-207ENST00000528895 ABTB2Q8N961 1025 aa15.89■□□□□ 0.13
TM9SF1-207ENST00000528895 AHDC1Q5TGY3 1603 aaPredicted RBP15.89■□□□□ 0.13
TM9SF1-207ENST00000528895 ARHGEF10O15013 1369 aa15.88■□□□□ 0.13
TM9SF1-207ENST00000528895 AATKQ6ZMQ8 1374 aa15.88■□□□□ 0.13
TM9SF1-207ENST00000528895 TNNT2P45379 298 aaPredicted RBP15.88■□□□□ 0.13
TM9SF1-207ENST00000528895 XPCQ01831 940 aaPredicted RBP15.88■□□□□ 0.13
TM9SF1-207ENST00000528895 NLRP6P59044 892 aa15.87■□□□□ 0.13
TM9SF1-207ENST00000528895 LRP6O75581 1613 aa15.86■□□□□ 0.13
TM9SF1-207ENST00000528895 SMG6Q86US8 1419 aaKnown RBP15.86■□□□□ 0.13
TM9SF1-207ENST00000528895 HOXD11P31277 338 aaPredicted RBP15.86■□□□□ 0.13
TM9SF1-207ENST00000528895 CFAP53Q96M91 514 aa15.86■□□□□ 0.13
TM9SF1-207ENST00000528895 SHPRHQ149N8 1683 aa15.86■□□□□ 0.13
TM9SF1-207ENST00000528895 MARF1Q9Y4F3 1742 aaKnown RBP15.85■□□□□ 0.13
TM9SF1-207ENST00000528895 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
TM9SF1-207ENST00000528895 SOS2Q07890 1332 aaPredicted RBP15.85■□□□□ 0.13
TM9SF1-207ENST00000528895 CDK12Q9NYV4 1490 aaPredicted RBP15.84■□□□□ 0.13
TM9SF1-207ENST00000528895 SLIT3O75094 1523 aa15.84■□□□□ 0.13
TM9SF1-207ENST00000528895 LMOD2Q6P5Q4 547 aa15.84■□□□□ 0.13
TM9SF1-207ENST00000528895 RNF216Q9NWF9 866 aaPredicted RBP15.84■□□□□ 0.13
TM9SF1-207ENST00000528895 KCNH5Q8NCM2 988 aa15.83■□□□□ 0.12
TM9SF1-207ENST00000528895 DDX17Q92841 729 aaKnown RBP15.83■□□□□ 0.12
TM9SF1-207ENST00000528895 SPATA31A6Q5VVP1 1343 aa15.83■□□□□ 0.12
TM9SF1-207ENST00000528895 SPATA31A3Q5VYP0 1347 aa15.83■□□□□ 0.12
TM9SF1-207ENST00000528895 NUTM2GQ5VZR2 741 aa15.82■□□□□ 0.12
TM9SF1-207ENST00000528895 USP19O94966 1318 aa15.82■□□□□ 0.12
TM9SF1-207ENST00000528895 PHRF1Q9P1Y6 1649 aaKnown RBP15.82■□□□□ 0.12
TM9SF1-207ENST00000528895 NFAT5O94916 1531 aa15.81■□□□□ 0.12
TM9SF1-207ENST00000528895 MTHFSP49914 203 aa15.81■□□□□ 0.12
TM9SF1-207ENST00000528895 RTL1A6NKG5 1358 aa15.8■□□□□ 0.12
TM9SF1-207ENST00000528895 KIF24Q5T7B8 1368 aa15.8■□□□□ 0.12
TM9SF1-207ENST00000528895 NPM3O75607 178 aaKnown RBP15.8■□□□□ 0.12
TM9SF1-207ENST00000528895 CCDC184Q52MB2 194 aa15.8■□□□□ 0.12
TM9SF1-207ENST00000528895 SOX12O15370 315 aa15.79■□□□□ 0.12
TM9SF1-207ENST00000528895 WDR43Q15061 677 aaKnown RBP eCLIP15.79■□□□□ 0.12
TM9SF1-207ENST00000528895 POLKQ9UBT6 870 aa15.79■□□□□ 0.12
TM9SF1-207ENST00000528895 CRYBG1Q9Y4K1 1723 aa15.79■□□□□ 0.12
TM9SF1-207ENST00000528895 FLT4P35916 1363 aa15.78■□□□□ 0.12
TM9SF1-207ENST00000528895 MAP2P11137 1827 aaKnown RBP15.78■□□□□ 0.12
TM9SF1-207ENST00000528895 PPM1GO15355 546 aaPredicted RBP15.78■□□□□ 0.12
TM9SF1-207ENST00000528895 COL3A1P02461 1466 aaPredicted RBP15.78■□□□□ 0.12
TM9SF1-207ENST00000528895 LTN1O94822 1766 aa15.77■□□□□ 0.12
TM9SF1-207ENST00000528895 INSRP06213 1382 aa15.77■□□□□ 0.12
TM9SF1-207ENST00000528895 RRS1Q15050 365 aaKnown RBP15.77■□□□□ 0.12
TM9SF1-207ENST00000528895 MEX3CQ5U5Q3 659 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms