RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 RIC3Q7Z5B4 369 aa6.52□□□□□ -1.37
BRCA2-203ENST00000528762 EVA1BQ9NVM1 165 aa6.52□□□□□ -1.37
BRCA2-203ENST00000528762 LIMD1Q9UGP4 676 aa6.52□□□□□ -1.37
BRCA2-203ENST00000528762 WASF2Q9Y6W5 498 aa6.52□□□□□ -1.37
BRCA2-203ENST00000528762 QPCTQ16769 361 aa6.51□□□□□ -1.37
BRCA2-203ENST00000528762 TREML4Q6UXN2 200 aa6.51□□□□□ -1.37
BRCA2-203ENST00000528762 SPTLC1O15269 473 aa6.5□□□□□ -1.37
BRCA2-203ENST00000528762 PER1O15534 1290 aaPredicted RBP6.5□□□□□ -1.37
BRCA2-203ENST00000528762 ZNF511Q8NB15 262 aa6.5□□□□□ -1.37
BRCA2-203ENST00000528762 FOXJ1Q92949 421 aa6.5□□□□□ -1.37
BRCA2-203ENST00000528762 MYSM1Q5VVJ2 828 aa6.49□□□□□ -1.37
BRCA2-203ENST00000528762 ZBTB3Q9H5J0 574 aa6.49□□□□□ -1.37
BRCA2-203ENST00000528762 SPDYE5A6NIY4 337 aa6.48□□□□□ -1.37
BRCA2-203ENST00000528762 NUTM2BA6NNL0 878 aaPredicted RBP6.48□□□□□ -1.37
BRCA2-203ENST00000528762 NUTM2EB1AL46 878 aaPredicted RBP6.48□□□□□ -1.37
BRCA2-203ENST00000528762 CAPN5O15484 640 aaPredicted RBP6.48□□□□□ -1.37
BRCA2-203ENST00000528762 WFS1O76024 890 aa6.48□□□□□ -1.37
BRCA2-203ENST00000528762 ARID5BQ14865 1188 aa6.48□□□□□ -1.37
BRCA2-203ENST00000528762 LCE2AQ5TA79 106 aaPredicted RBP6.48□□□□□ -1.37
BRCA2-203ENST00000528762 NUTM2DQ5VT03 806 aaPredicted RBP6.48□□□□□ -1.37
BRCA2-203ENST00000528762 LYPD8Q6UX82 237 aa6.48□□□□□ -1.37
BRCA2-203ENST00000528762 TRIM46Q7Z4K8 759 aa6.48□□□□□ -1.37
BRCA2-203ENST00000528762 NUTM2AQ8IVF1 878 aaPredicted RBP6.48□□□□□ -1.37
BRCA2-203ENST00000528762 TRIM47Q96LD4 638 aa6.48□□□□□ -1.37
BRCA2-203ENST00000528762 NFX1Q12986 1120 aaKnown RBP6.47□□□□□ -1.37
BRCA2-203ENST00000528762 LCE2CQ5TA81 110 aa6.47□□□□□ -1.37
BRCA2-203ENST00000528762 C14orf37Q86TY3 774 aa6.47□□□□□ -1.37
BRCA2-203ENST00000528762 POLR3EQ9NVU0 708 aa6.47□□□□□ -1.37
BRCA2-203ENST00000528762 F12P00748 615 aaPredicted RBP6.46□□□□□ -1.38
BRCA2-203ENST00000528762 VEGFBP49765 207 aa6.46□□□□□ -1.38
BRCA2-203ENST00000528762 NNTQ13423 1086 aa6.46□□□□□ -1.38
BRCA2-203ENST00000528762 AGERQ15109 404 aa6.46□□□□□ -1.38
BRCA2-203ENST00000528762 DIXDC1Q155Q3 683 aa6.46□□□□□ -1.38
BRCA2-203ENST00000528762 RTL5Q5HYW3 569 aaPredicted RBP6.46□□□□□ -1.38
BRCA2-203ENST00000528762 DESI1Q6ICB0 168 aa6.46□□□□□ -1.38
BRCA2-203ENST00000528762 C4orf48Q5BLP8 95 aa6.45□□□□□ -1.38
BRCA2-203ENST00000528762 SENP2Q9HC62 589 aa6.45□□□□□ -1.38
BRCA2-203ENST00000528762 VARSP26640 1264 aaKnown RBP6.44□□□□□ -1.38
BRCA2-203ENST00000528762 GJA5P36382 358 aa6.44□□□□□ -1.38
BRCA2-203ENST00000528762 ARXQ96QS3 562 aa6.44□□□□□ -1.38
BRCA2-203ENST00000528762 GPBP1L1Q9HC44 474 aaPredicted RBP6.44□□□□□ -1.38
BRCA2-203ENST00000528762 SOBPA7XYQ1 873 aa6.43□□□□□ -1.38
BRCA2-203ENST00000528762 TERTO14746 1132 aaKnown RBP6.43□□□□□ -1.38
BRCA2-203ENST00000528762 LILRB3O75022 631 aa6.43□□□□□ -1.38
BRCA2-203ENST00000528762 CLK2P49760 499 aaKnown RBP6.43□□□□□ -1.38
BRCA2-203ENST00000528762 WDR4P57081 412 aaKnown RBP6.43□□□□□ -1.38
BRCA2-203ENST00000528762 PRPF38BQ5VTL8 546 aaKnown RBP6.43□□□□□ -1.38
BRCA2-203ENST00000528762 TIMP2P16035 220 aa6.42□□□□□ -1.38
BRCA2-203ENST00000528762 FBXO31Q5XUX0 539 aaPredicted RBP6.42□□□□□ -1.38
BRCA2-203ENST00000528762 FAM174AQ8TBP5 190 aa6.42□□□□□ -1.38
BRCA2-203ENST00000528762 KIFC2Q96AC6 838 aa6.42□□□□□ -1.38
BRCA2-203ENST00000528762 ZFP42Q96MM3 310 aa6.42□□□□□ -1.38
BRCA2-203ENST00000528762 PURBQ96QR8 312 aaKnown RBP6.42□□□□□ -1.38
BRCA2-203ENST00000528762 ZFAND3Q9H8U3 227 aa6.42□□□□□ -1.38
BRCA2-203ENST00000528762 MAGEB6P1A0A0J9YX57 407 aa6.41□□□□□ -1.38
BRCA2-203ENST00000528762 PLEKHG3A1L390 1219 aa6.41□□□□□ -1.38
BRCA2-203ENST00000528762 NR3C2P08235 984 aa6.41□□□□□ -1.38
BRCA2-203ENST00000528762 CARD14Q9BXL6 1004 aa6.41□□□□□ -1.38
BRCA2-203ENST00000528762 ATP1B4Q9UN42 357 aaPredicted RBP6.41□□□□□ -1.38
BRCA2-203ENST00000528762 ADH1CP00326 375 aa6.4□□□□□ -1.38
BRCA2-203ENST00000528762 C6orf118Q5T5N4 469 aa6.4□□□□□ -1.38
BRCA2-203ENST00000528762 ZIC2O95409 532 aaPredicted RBP6.39□□□□□ -1.39
BRCA2-203ENST00000528762 CTDSPL2Q05D32 466 aa6.39□□□□□ -1.39
BRCA2-203ENST00000528762 MRPL14Q6P1L8 145 aaKnown RBP6.39□□□□□ -1.39
BRCA2-203ENST00000528762 PROCA1Q8NCQ7 364 aaPredicted RBP6.39□□□□□ -1.39
BRCA2-203ENST00000528762 IL27Q8NEV9 243 aa6.39□□□□□ -1.39
BRCA2-203ENST00000528762 HELBQ8NG08 1087 aaPredicted RBP6.39□□□□□ -1.39
BRCA2-203ENST00000528762 LRRN4Q8WUT4 740 aa6.39□□□□□ -1.39
BRCA2-203ENST00000528762 ITPKCQ96DU7 683 aa6.39□□□□□ -1.39
BRCA2-203ENST00000528762 FSHRP23945 695 aa6.38□□□□□ -1.39
BRCA2-203ENST00000528762 FAM117AQ9C073 453 aa6.38□□□□□ -1.39
BRCA2-203ENST00000528762 GRM5P41594 1212 aa6.37□□□□□ -1.39
BRCA2-203ENST00000528762 BPHLQ86WA6 291 aaPredicted RBP6.37□□□□□ -1.39
BRCA2-203ENST00000528762 KLF16Q9BXK1 252 aaPredicted RBP6.37□□□□□ -1.39
BRCA2-203ENST00000528762 KDM4CQ9H3R0 1056 aa6.37□□□□□ -1.39
BRCA2-203ENST00000528762 CDK15Q96Q40 435 aa6.36□□□□□ -1.39
BRCA2-203ENST00000528762 NXF1Q9UBU9 619 aaKnown RBP6.36□□□□□ -1.39
BRCA2-203ENST00000528762 ERBB4Q15303 1308 aa6.35□□□□□ -1.39
BRCA2-203ENST00000528762 GMPRP36959 345 aa6.35□□□□□ -1.39
BRCA2-203ENST00000528762 SCARF1Q14162 830 aa6.35□□□□□ -1.39
BRCA2-203ENST00000528762 TUSC1Q2TAM9 212 aa6.35□□□□□ -1.39
BRCA2-203ENST00000528762 VASH1Q7L8A9 365 aaPredicted RBP6.35□□□□□ -1.39
BRCA2-203ENST00000528762 MPNDQ8N594 471 aa6.35□□□□□ -1.39
BRCA2-203ENST00000528762 RSPH6AQ9H0K4 717 aa6.35□□□□□ -1.39
BRCA2-203ENST00000528762 WIPF1O43516 503 aa6.34□□□□□ -1.39
BRCA2-203ENST00000528762 NR6A1Q15406 480 aa6.34□□□□□ -1.39
BRCA2-203ENST00000528762 NBPF14Q5TI25 921 aa6.34□□□□□ -1.39
BRCA2-203ENST00000528762 SH3BP5LQ7L8J4 393 aa6.34□□□□□ -1.39
BRCA2-203ENST00000528762 C1QTNF2Q9BXJ5 285 aa6.34□□□□□ -1.39
BRCA2-203ENST00000528762 AP1G2O75843 785 aa6.33□□□□□ -1.4
BRCA2-203ENST00000528762 BMP2P12643 396 aa6.33□□□□□ -1.4
BRCA2-203ENST00000528762 NR5A1Q13285 461 aa6.33□□□□□ -1.4
BRCA2-203ENST00000528762 ERFEQ4G0M1 354 aa6.33□□□□□ -1.4
BRCA2-203ENST00000528762 SH3RF1Q7Z6J0 888 aa6.33□□□□□ -1.4
BRCA2-203ENST00000528762 ARMC2Q8NEN0 867 aa6.33□□□□□ -1.4
BRCA2-203ENST00000528762 EPS8L1Q8TE68 723 aa6.33□□□□□ -1.4
BRCA2-203ENST00000528762 SLC16A10Q8TF71 515 aa6.33□□□□□ -1.4
BRCA2-203ENST00000528762 H3BM21 787 aa6.32□□□□□ -1.4
BRCA2-203ENST00000528762 MAN1A2O60476 641 aa6.31□□□□□ -1.4
BRCA2-203ENST00000528762 RAB15P59190 212 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms