RNA–Protein interactions for RNA: ENST00000528699.1

SIPA1-204, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-204ENST00000528699 NGDNQ8NEJ9 315 aaKnown RBP15.53■□□□□ 0.08
SIPA1-204ENST00000528699 NRAPQ86VF7 1730 aa15.53■□□□□ 0.08
SIPA1-204ENST00000528699 COL14A1Q05707 1796 aaKnown RBP15.52■□□□□ 0.07
SIPA1-204ENST00000528699 PHRF1Q9P1Y6 1649 aaKnown RBP15.5■□□□□ 0.07
SIPA1-204ENST00000528699 PLEKHG3A1L390 1219 aa15.5■□□□□ 0.07
SIPA1-204ENST00000528699 FAM83GA6ND36 823 aa15.5■□□□□ 0.07
SIPA1-204ENST00000528699 PLEKHG5O94827 1062 aa15.5■□□□□ 0.07
SIPA1-204ENST00000528699 VPS72Q15906 364 aa15.5■□□□□ 0.07
SIPA1-204ENST00000528699 CCDC61Q9Y6R9 512 aa15.5■□□□□ 0.07
SIPA1-204ENST00000528699 ACEP12821 1306 aa15.49■□□□□ 0.07
SIPA1-204ENST00000528699 PAK3O75914 559 aaPredicted RBP15.48■□□□□ 0.07
SIPA1-204ENST00000528699 PPIP5K1Q6PFW1 1433 aa15.48■□□□□ 0.07
SIPA1-204ENST00000528699 NEUROD1Q13562 356 aa15.47■□□□□ 0.07
SIPA1-204ENST00000528699 NRKQ7Z2Y5 1582 aa15.46■□□□□ 0.07
SIPA1-204ENST00000528699 BRWD3Q6RI45 1802 aa15.46■□□□□ 0.07
SIPA1-204ENST00000528699 NBPF8Q3BBV2 869 aa15.46■□□□□ 0.07
SIPA1-204ENST00000528699 ROCK2O75116 1388 aaKnown RBP15.46■□□□□ 0.07
SIPA1-204ENST00000528699 ONECUT3O60422 494 aaPredicted RBP15.45■□□□□ 0.06
SIPA1-204ENST00000528699 SRPK2P78362 688 aaKnown RBP15.45■□□□□ 0.06
SIPA1-204ENST00000528699 CABP2Q9NPB3 220 aa15.45■□□□□ 0.06
SIPA1-204ENST00000528699 BTG4Q9NY30 223 aa15.45■□□□□ 0.06
SIPA1-204ENST00000528699 KIAA0232Q92628 1395 aa15.43■□□□□ 0.06
SIPA1-204ENST00000528699 USP19O94966 1318 aa15.43■□□□□ 0.06
SIPA1-204ENST00000528699 BRD4O60885 1362 aaPredicted RBP15.42■□□□□ 0.06
SIPA1-204ENST00000528699 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
SIPA1-204ENST00000528699 PRDM11Q9NQV5 511 aa15.42■□□□□ 0.06
SIPA1-204ENST00000528699 USP6P35125 1406 aa15.42■□□□□ 0.06
SIPA1-204ENST00000528699 CCDC9Q9Y3X0 531 aaKnown RBP15.41■□□□□ 0.06
SIPA1-204ENST00000528699 THSD7AQ9UPZ6 1657 aa15.41■□□□□ 0.06
SIPA1-204ENST00000528699 EVC2Q86UK5 1308 aa15.41■□□□□ 0.06
SIPA1-204ENST00000528699 SBNO2Q9Y2G9 1366 aa15.4■□□□□ 0.06
SIPA1-204ENST00000528699 NUTM2GQ5VZR2 741 aa15.4■□□□□ 0.06
SIPA1-204ENST00000528699 CCDC125Q86Z20 511 aa15.4■□□□□ 0.06
SIPA1-204ENST00000528699 LMO7Q8WWI1 1683 aa15.4■□□□□ 0.06
SIPA1-204ENST00000528699 SSH2Q76I76 1423 aa15.4■□□□□ 0.06
SIPA1-204ENST00000528699 SPATA31A5Q5VU36 1347 aa15.4■□□□□ 0.06
SIPA1-204ENST00000528699 SPATA31A7Q8IWB4 1347 aa15.4■□□□□ 0.06
SIPA1-204ENST00000528699 CPDO75976 1380 aa15.39■□□□□ 0.05
SIPA1-204ENST00000528699 ABTB2Q8N961 1025 aa15.39■□□□□ 0.05
SIPA1-204ENST00000528699 CABP1Q9NZU7 370 aa15.39■□□□□ 0.05
SIPA1-204ENST00000528699 BLMP54132 1417 aaPredicted RBP15.39■□□□□ 0.05
SIPA1-204ENST00000528699 PIK3C2AO00443 1686 aa15.38■□□□□ 0.05
SIPA1-204ENST00000528699 SLIT3O75094 1523 aa15.38■□□□□ 0.05
SIPA1-204ENST00000528699 TONSLQ96HA7 1378 aa15.37■□□□□ 0.05
SIPA1-204ENST00000528699 AKAP12Q02952 1782 aa15.37■□□□□ 0.05
SIPA1-204ENST00000528699 CHRNA2Q15822 529 aa15.37■□□□□ 0.05
SIPA1-204ENST00000528699 FAM98CQ17RN3 349 aaKnown RBP15.37■□□□□ 0.05
SIPA1-204ENST00000528699 CAMTA1Q9Y6Y1 1673 aa15.36■□□□□ 0.05
SIPA1-204ENST00000528699 ZC3H6P61129 1189 aaKnown RBP15.36■□□□□ 0.05
SIPA1-204ENST00000528699 KRT27Q7Z3Y8 459 aa15.36■□□□□ 0.05
SIPA1-204ENST00000528699 NLRP13Q86W25 1043 aa15.35■□□□□ 0.05
SIPA1-204ENST00000528699 SPATA31A1Q5TZJ5 1347 aa15.35■□□□□ 0.05
SIPA1-204ENST00000528699 CARD11Q9BXL7 1154 aa15.34■□□□□ 0.05
SIPA1-204ENST00000528699 CPSF1Q10570 1443 aaKnown RBP15.34■□□□□ 0.05
SIPA1-204ENST00000528699 SRCAPQ6ZRS2 3230 aa15.33■□□□□ 0.04
SIPA1-204ENST00000528699 GCP02774 474 aa15.33■□□□□ 0.04
SIPA1-204ENST00000528699 MON2Q7Z3U7 1717 aa15.33■□□□□ 0.04
SIPA1-204ENST00000528699 A0A0G2JS52 829 aa15.32■□□□□ 0.04
SIPA1-204ENST00000528699 MYT1Q01538 1121 aa15.32■□□□□ 0.04
SIPA1-204ENST00000528699 STRN4Q9NRL3 753 aa15.32■□□□□ 0.04
SIPA1-204ENST00000528699 COL5A2P05997 1499 aaPredicted RBP15.32■□□□□ 0.04
SIPA1-204ENST00000528699 CD163L1Q9NR16 1453 aa15.31■□□□□ 0.04
SIPA1-204ENST00000528699 COL18A1P39060 1754 aa15.3■□□□□ 0.04
SIPA1-204ENST00000528699 NLRP6P59044 892 aa15.3■□□□□ 0.04
SIPA1-204ENST00000528699 TTC21BQ7Z4L5 1316 aa15.3■□□□□ 0.04
SIPA1-204ENST00000528699 ZNF692Q9BU19 519 aaPredicted RBP15.3■□□□□ 0.04
SIPA1-204ENST00000528699 RGPD1P0DJD0 1748 aa15.29■□□□□ 0.04
SIPA1-204ENST00000528699 USP54Q70EL1 1684 aa15.29■□□□□ 0.04
SIPA1-204ENST00000528699 AATKQ6ZMQ8 1374 aa15.29■□□□□ 0.04
SIPA1-204ENST00000528699 TTC21AQ8NDW8 1320 aa15.29■□□□□ 0.04
SIPA1-204ENST00000528699 DEFB132Q7Z7B7 95 aa15.29■□□□□ 0.04
SIPA1-204ENST00000528699 PCGF6Q9BYE7 350 aa15.29■□□□□ 0.04
SIPA1-204ENST00000528699 KTN1Q86UP2 1357 aaKnown RBP15.28■□□□□ 0.04
SIPA1-204ENST00000528699 CLSPNQ9HAW4 1339 aa15.28■□□□□ 0.04
SIPA1-204ENST00000528699 LARP1Q6PKG0 1096 aaKnown RBP15.28■□□□□ 0.04
SIPA1-204ENST00000528699 BARGINQ6ZT62 677 aa15.28■□□□□ 0.04
SIPA1-204ENST00000528699 TNS1Q9HBL0 1735 aaKnown RBP15.28■□□□□ 0.04
SIPA1-204ENST00000528699 NFAT5O94916 1531 aa15.27■□□□□ 0.04
SIPA1-204ENST00000528699 ZRANB1Q9UGI0 708 aa15.27■□□□□ 0.04
SIPA1-204ENST00000528699 CRB1P82279 1406 aa15.26■□□□□ 0.03
SIPA1-204ENST00000528699 PARP4Q9UKK3 1724 aaKnown RBP15.26■□□□□ 0.03
SIPA1-204ENST00000528699 EVA1CP58658 441 aa15.26■□□□□ 0.03
SIPA1-204ENST00000528699 SF3B2Q13435 895 aaKnown RBP15.26■□□□□ 0.03
SIPA1-204ENST00000528699 FAM182BQ5T319 152 aa15.26■□□□□ 0.03
SIPA1-204ENST00000528699 USP35Q9P2H5 1018 aa15.26■□□□□ 0.03
SIPA1-204ENST00000528699 DISP2A7MBM2 1401 aa15.26■□□□□ 0.03
SIPA1-204ENST00000528699 TCP11L2Q8N4U5 519 aa15.25■□□□□ 0.03
SIPA1-204ENST00000528699 ABCC6O95255 1503 aa15.25■□□□□ 0.03
SIPA1-204ENST00000528699 USP31Q70CQ4 1352 aa15.24■□□□□ 0.03
SIPA1-204ENST00000528699 PUS7Q96PZ0 661 aaKnown RBP15.24■□□□□ 0.03
SIPA1-204ENST00000528699 TESK2Q96S53 571 aa15.24■□□□□ 0.03
SIPA1-204ENST00000528699 THRAP3Q9Y2W1 955 aaKnown RBP15.24■□□□□ 0.03
SIPA1-204ENST00000528699 WNK3Q9BYP7 1800 aa15.23■□□□□ 0.03
SIPA1-204ENST00000528699 ARHGEF25Q86VW2 580 aa15.23■□□□□ 0.03
SIPA1-204ENST00000528699 KCNH5Q8NCM2 988 aa15.23■□□□□ 0.03
SIPA1-204ENST00000528699 A0A1W2PP64 1363 aa15.23■□□□□ 0.03
SIPA1-204ENST00000528699 LRRC37A3O60309 1634 aa15.22■□□□□ 0.03
SIPA1-204ENST00000528699 ZBTB7CA1YPR0 619 aa15.22■□□□□ 0.03
SIPA1-204ENST00000528699 BAG6P46379 1132 aa15.22■□□□□ 0.03
SIPA1-204ENST00000528699 AXIN2Q9Y2T1 843 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms