RNA–Protein interactions for RNA: ENST00000528225.5

ARHGEF12-206, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 5

Gene ARHGEF12, Length 2,647 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-206ENST00000528225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.33□□□□□ -0.76
ARHGEF12-206ENST00000528225 ZNF518AQ6AHZ1 1483 aa10.33□□□□□ -0.76
ARHGEF12-206ENST00000528225 NCLP19338 710 aaKnown RBP10.33□□□□□ -0.76
ARHGEF12-206ENST00000528225 GAS2L2Q8NHY3 880 aa10.33□□□□□ -0.76
ARHGEF12-206ENST00000528225 FAM13BQ9NYF5 915 aa10.33□□□□□ -0.76
ARHGEF12-206ENST00000528225 IPO8O15397 1037 aaKnown RBP10.32□□□□□ -0.76
ARHGEF12-206ENST00000528225 ZNF445P59923 1031 aa10.32□□□□□ -0.76
ARHGEF12-206ENST00000528225 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
ARHGEF12-206ENST00000528225 ADGRF5Q8IZF2 1346 aa10.32□□□□□ -0.76
ARHGEF12-206ENST00000528225 NOL7Q9UMY1 257 aaKnown RBP10.31□□□□□ -0.76
ARHGEF12-206ENST00000528225 ANKRD45Q5TZF3 282 aa10.31□□□□□ -0.76
ARHGEF12-206ENST00000528225 MCTP1Q6DN14 999 aa10.31□□□□□ -0.76
ARHGEF12-206ENST00000528225 ZNF500O60304 480 aaPredicted RBP10.3□□□□□ -0.76
ARHGEF12-206ENST00000528225 PRDM4Q9UKN5 801 aa10.3□□□□□ -0.76
ARHGEF12-206ENST00000528225 MAP3K4Q9Y6R4 1608 aa10.3□□□□□ -0.76
ARHGEF12-206ENST00000528225 AK9Q5TCS8 1911 aa10.3□□□□□ -0.76
ARHGEF12-206ENST00000528225 SBNO2Q9Y2G9 1366 aa10.3□□□□□ -0.76
ARHGEF12-206ENST00000528225 ABCA6Q8N139 1617 aa10.3□□□□□ -0.76
ARHGEF12-206ENST00000528225 CAVIN1Q6NZI2 390 aaKnown RBP10.3□□□□□ -0.76
ARHGEF12-206ENST00000528225 TBC1D9Q6ZT07 1266 aa10.3□□□□□ -0.76
ARHGEF12-206ENST00000528225 KIF16BQ96L93 1317 aa10.3□□□□□ -0.76
ARHGEF12-206ENST00000528225 UQCRHLA0A096LP55 91 aa10.29□□□□□ -0.76
ARHGEF12-206ENST00000528225 UQCRHP07919 91 aa10.29□□□□□ -0.76
ARHGEF12-206ENST00000528225 NUCB2P80303 420 aa10.29□□□□□ -0.76
ARHGEF12-206ENST00000528225 ZSCAN23Q3MJ62 389 aa10.29□□□□□ -0.76
ARHGEF12-206ENST00000528225 RBSNQ9H1K0 784 aa10.29□□□□□ -0.76
ARHGEF12-206ENST00000528225 TMPOP42166 694 aaKnown RBP10.29□□□□□ -0.76
ARHGEF12-206ENST00000528225 XPCQ01831 940 aaPredicted RBP10.29□□□□□ -0.76
ARHGEF12-206ENST00000528225 EFCAB2Q5VUJ9 269 aa10.29□□□□□ -0.76
ARHGEF12-206ENST00000528225 ADGRL1O94910 1474 aa10.29□□□□□ -0.76
ARHGEF12-206ENST00000528225 CSPP1Q1MSJ5 1256 aa10.28□□□□□ -0.76
ARHGEF12-206ENST00000528225 GCC1Q96CN9 775 aa10.28□□□□□ -0.76
ARHGEF12-206ENST00000528225 ADGRB2O60241 1585 aa10.28□□□□□ -0.76
ARHGEF12-206ENST00000528225 MYO3AQ8NEV4 1616 aa10.28□□□□□ -0.76
ARHGEF12-206ENST00000528225 CFAP74Q9C0B2 1584 aa10.28□□□□□ -0.76
ARHGEF12-206ENST00000528225 MYOM2P54296 1465 aa10.28□□□□□ -0.76
ARHGEF12-206ENST00000528225 MTERF4Q7Z6M4 381 aaKnown RBP10.28□□□□□ -0.76
ARHGEF12-206ENST00000528225 PDLIM2Q96JY6 352 aa10.28□□□□□ -0.76
ARHGEF12-206ENST00000528225 LMBRD1Q9NUN5 540 aa10.28□□□□□ -0.76
ARHGEF12-206ENST00000528225 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.28□□□□□ -0.76
ARHGEF12-206ENST00000528225 TRIM35Q9UPQ4 493 aa10.28□□□□□ -0.76
ARHGEF12-206ENST00000528225 NOS1P29475 1434 aa10.27□□□□□ -0.76
ARHGEF12-206ENST00000528225 U2SURPO15042 1029 aaKnown RBP10.27□□□□□ -0.76
ARHGEF12-206ENST00000528225 TRAK1Q9UPV9 953 aa10.27□□□□□ -0.76
ARHGEF12-206ENST00000528225 ARHGAP31Q2M1Z3 1444 aa10.27□□□□□ -0.77
ARHGEF12-206ENST00000528225 SPAG9O60271 1321 aaKnown RBP10.27□□□□□ -0.77
ARHGEF12-206ENST00000528225 IL16Q14005 1332 aa10.27□□□□□ -0.77
ARHGEF12-206ENST00000528225 DYNC1I1O14576 645 aa10.27□□□□□ -0.77
ARHGEF12-206ENST00000528225 ZKSCAN5Q9Y2L8 839 aa10.27□□□□□ -0.77
ARHGEF12-206ENST00000528225 TET3O43151 1660 aa10.27□□□□□ -0.77
ARHGEF12-206ENST00000528225 ABCC11Q96J66 1382 aa10.26□□□□□ -0.77
ARHGEF12-206ENST00000528225 CDC45O75419 566 aa10.26□□□□□ -0.77
ARHGEF12-206ENST00000528225 MCM5P33992 734 aa10.26□□□□□ -0.77
ARHGEF12-206ENST00000528225 PRIM1P49642 420 aaKnown RBP10.26□□□□□ -0.77
ARHGEF12-206ENST00000528225 RABEP1Q15276 862 aa10.26□□□□□ -0.77
ARHGEF12-206ENST00000528225 PLEKHF1Q96S99 279 aa10.26□□□□□ -0.77
ARHGEF12-206ENST00000528225 TRAPPC8Q9Y2L5 1435 aa10.26□□□□□ -0.77
ARHGEF12-206ENST00000528225 NEURL4Q96JN8 1562 aa10.26□□□□□ -0.77
ARHGEF12-206ENST00000528225 ALDH1L2Q3SY69 923 aa10.26□□□□□ -0.77
ARHGEF12-206ENST00000528225 CHMP4BQ9H444 224 aaKnown RBP10.26□□□□□ -0.77
ARHGEF12-206ENST00000528225 USP32Q8NFA0 1604 aa10.26□□□□□ -0.77
ARHGEF12-206ENST00000528225 KIF1BO60333 1816 aa10.25□□□□□ -0.77
ARHGEF12-206ENST00000528225 SMAP1Q8IYB5 467 aaPredicted RBP10.25□□□□□ -0.77
ARHGEF12-206ENST00000528225 PLCH2O75038 1416 aa10.25□□□□□ -0.77
ARHGEF12-206ENST00000528225 CD109Q6YHK3 1445 aa10.25□□□□□ -0.77
ARHGEF12-206ENST00000528225 PRPF40AO75400 957 aaKnown RBP10.25□□□□□ -0.77
ARHGEF12-206ENST00000528225 CCDC39Q9UFE4 941 aa10.25□□□□□ -0.77
ARHGEF12-206ENST00000528225 ZBTB7BO15156 539 aaPredicted RBP10.24□□□□□ -0.77
ARHGEF12-206ENST00000528225 CYP2E1P05181 493 aaPredicted RBP10.24□□□□□ -0.77
ARHGEF12-206ENST00000528225 SASS6Q6UVJ0 657 aa10.24□□□□□ -0.77
ARHGEF12-206ENST00000528225 PPIP5K1Q6PFW1 1433 aa10.24□□□□□ -0.77
ARHGEF12-206ENST00000528225 CWC22Q9HCG8 908 aaKnown RBP10.24□□□□□ -0.77
ARHGEF12-206ENST00000528225 RBM27Q9P2N5 1060 aaKnown RBP10.24□□□□□ -0.77
ARHGEF12-206ENST00000528225 CFAP44Q96MT7 982 aa10.23□□□□□ -0.77
ARHGEF12-206ENST00000528225 C1orf115Q9H7X2 142 aa10.23□□□□□ -0.77
ARHGEF12-206ENST00000528225 PODXL2Q9NZ53 605 aa10.23□□□□□ -0.77
ARHGEF12-206ENST00000528225 NSD2O96028 1365 aa10.23□□□□□ -0.77
ARHGEF12-206ENST00000528225 QRICH2Q9H0J4 1663 aa10.23□□□□□ -0.77
ARHGEF12-206ENST00000528225 ABCC1P33527 1531 aa10.23□□□□□ -0.77
ARHGEF12-206ENST00000528225 LRSAM1Q6UWE0 723 aa10.23□□□□□ -0.77
ARHGEF12-206ENST00000528225 AFAP1Q8N556 730 aa10.23□□□□□ -0.77
ARHGEF12-206ENST00000528225 UGGT1Q9NYU2 1555 aa10.23□□□□□ -0.77
ARHGEF12-206ENST00000528225 DEPDC5O75140 1603 aa10.22□□□□□ -0.77
ARHGEF12-206ENST00000528225 IFT172Q9UG01 1749 aa10.22□□□□□ -0.77
ARHGEF12-206ENST00000528225 PKP1Q13835 747 aa10.22□□□□□ -0.77
ARHGEF12-206ENST00000528225 GPT2Q8TD30 523 aa10.22□□□□□ -0.77
ARHGEF12-206ENST00000528225 ARID3AQ99856 593 aa10.22□□□□□ -0.77
ARHGEF12-206ENST00000528225 KIF3BO15066 747 aa10.22□□□□□ -0.77
ARHGEF12-206ENST00000528225 ZC3H13Q5T200 1668 aaKnown RBP10.22□□□□□ -0.77
ARHGEF12-206ENST00000528225 SETBP1Q9Y6X0 1596 aa10.22□□□□□ -0.77
ARHGEF12-206ENST00000528225 CHGAP10645 457 aaKnown RBP10.21□□□□□ -0.77
ARHGEF12-206ENST00000528225 SYCE3A1L190 88 aa10.21□□□□□ -0.78
ARHGEF12-206ENST00000528225 BRPF1P55201 1214 aaPredicted RBP10.21□□□□□ -0.78
ARHGEF12-206ENST00000528225 USP26Q9BXU7 913 aa10.21□□□□□ -0.78
ARHGEF12-206ENST00000528225 NRXN1Q9ULB1 1477 aa10.21□□□□□ -0.78
ARHGEF12-206ENST00000528225 ANKRD36BQ8N2N9 1353 aa10.21□□□□□ -0.78
ARHGEF12-206ENST00000528225 SIRT2Q8IXJ6 389 aa10.2□□□□□ -0.78
ARHGEF12-206ENST00000528225 ZNF428Q96B54 188 aa10.2□□□□□ -0.78
ARHGEF12-206ENST00000528225 PPRC1Q5VV67 1664 aaKnown RBP10.2□□□□□ -0.78
ARHGEF12-206ENST00000528225 MED14O60244 1454 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms