RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 L3MBTL2Q969R5 705 aa16.04■□□□□ 0.16
NR1H3-230ENST00000527949 ATP7BP35670 1465 aa16.03■□□□□ 0.16
NR1H3-230ENST00000527949 DISP2A7MBM2 1401 aa16.03■□□□□ 0.16
NR1H3-230ENST00000527949 BRWD3Q6RI45 1802 aa16.03■□□□□ 0.16
NR1H3-230ENST00000527949 TRPM3Q9HCF6 1732 aaPredicted RBP16.03■□□□□ 0.16
NR1H3-230ENST00000527949 PSDA5PKW4 1024 aaPredicted RBP16.03■□□□□ 0.16
NR1H3-230ENST00000527949 PLEKHG5O94827 1062 aa16.02■□□□□ 0.16
NR1H3-230ENST00000527949 NBPF1Q3BBV0 1214 aa16.02■□□□□ 0.16
NR1H3-230ENST00000527949 HIRIP3Q9BW71 556 aaPredicted RBP16.02■□□□□ 0.16
NR1H3-230ENST00000527949 SPATA31A5Q5VU36 1347 aa16.01■□□□□ 0.15
NR1H3-230ENST00000527949 SPATA31A7Q8IWB4 1347 aa16.01■□□□□ 0.15
NR1H3-230ENST00000527949 EN1Q05925 392 aaPredicted RBP16.01■□□□□ 0.15
NR1H3-230ENST00000527949 PMFBP1Q8TBY8 1022 aa16.01■□□□□ 0.15
NR1H3-230ENST00000527949 ALS2Q96Q42 1657 aa16.01■□□□□ 0.15
NR1H3-230ENST00000527949 PARD3Q8TEW0 1356 aa16■□□□□ 0.15
NR1H3-230ENST00000527949 TOPAZ1Q8N9V7 1692 aa16■□□□□ 0.15
NR1H3-230ENST00000527949 TRPM1Q7Z4N2 1603 aa16■□□□□ 0.15
NR1H3-230ENST00000527949 ABCA3Q99758 1704 aa15.99■□□□□ 0.15
NR1H3-230ENST00000527949 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
NR1H3-230ENST00000527949 FAM196AQ6ZSG2 479 aa15.99■□□□□ 0.15
NR1H3-230ENST00000527949 NUDT16Q96DE0 195 aaKnown RBP15.99■□□□□ 0.15
NR1H3-230ENST00000527949 COL14A1Q05707 1796 aaKnown RBP15.99■□□□□ 0.15
NR1H3-230ENST00000527949 POLR3AO14802 1390 aaPredicted RBP15.99■□□□□ 0.15
NR1H3-230ENST00000527949 CENPJQ9HC77 1338 aaPredicted RBP15.98■□□□□ 0.15
NR1H3-230ENST00000527949 PLEKHG3A1L390 1219 aa15.98■□□□□ 0.15
NR1H3-230ENST00000527949 RGPD1P0DJD0 1748 aa15.98■□□□□ 0.15
NR1H3-230ENST00000527949 R3HDM1Q15032 1099 aaKnown RBP15.98■□□□□ 0.15
NR1H3-230ENST00000527949 SIN3AQ96ST3 1273 aa15.98■□□□□ 0.15
NR1H3-230ENST00000527949 CDK19Q9BWU1 502 aa15.98■□□□□ 0.15
NR1H3-230ENST00000527949 PRDM11Q9NQV5 511 aa15.98■□□□□ 0.15
NR1H3-230ENST00000527949 CCDC61Q9Y6R9 512 aa15.98■□□□□ 0.15
NR1H3-230ENST00000527949 NGDNQ8NEJ9 315 aaKnown RBP15.97■□□□□ 0.15
NR1H3-230ENST00000527949 NRAPQ86VF7 1730 aa15.97■□□□□ 0.15
NR1H3-230ENST00000527949 BRD4O60885 1362 aaPredicted RBP15.96■□□□□ 0.15
NR1H3-230ENST00000527949 QRICH2Q9H0J4 1663 aa15.95■□□□□ 0.14
NR1H3-230ENST00000527949 C11orf95C9JLR9 678 aaPredicted RBP15.94■□□□□ 0.14
NR1H3-230ENST00000527949 PAK3O75914 559 aaPredicted RBP15.94■□□□□ 0.14
NR1H3-230ENST00000527949 CRYBG1Q9Y4K1 1723 aa15.94■□□□□ 0.14
NR1H3-230ENST00000527949 SPATA31A1Q5TZJ5 1347 aa15.94■□□□□ 0.14
NR1H3-230ENST00000527949 NBPF8Q3BBV2 869 aa15.93■□□□□ 0.14
NR1H3-230ENST00000527949 NBPF14Q5TI25 921 aa15.93■□□□□ 0.14
NR1H3-230ENST00000527949 CAMKK2Q96RR4 588 aa15.93■□□□□ 0.14
NR1H3-230ENST00000527949 THSD7AQ9UPZ6 1657 aa15.92■□□□□ 0.14
NR1H3-230ENST00000527949 ROCK2O75116 1388 aaKnown RBP15.92■□□□□ 0.14
NR1H3-230ENST00000527949 NEUROD1Q13562 356 aa15.92■□□□□ 0.14
NR1H3-230ENST00000527949 EZH2Q15910 746 aaKnown RBP15.92■□□□□ 0.14
NR1H3-230ENST00000527949 SBNO2Q9Y2G9 1366 aa15.91■□□□□ 0.14
NR1H3-230ENST00000527949 DCAF8L1A6NGE4 600 aa15.91■□□□□ 0.14
NR1H3-230ENST00000527949 APBA3O96018 575 aa15.91■□□□□ 0.14
NR1H3-230ENST00000527949 PDE3BQ13370 1112 aa15.91■□□□□ 0.14
NR1H3-230ENST00000527949 BARGINQ6ZT62 677 aa15.91■□□□□ 0.14
NR1H3-230ENST00000527949 ACEP12821 1306 aa15.91■□□□□ 0.14
NR1H3-230ENST00000527949 TRIM37O94972 964 aa15.9■□□□□ 0.14
NR1H3-230ENST00000527949 FAM182BQ5T319 152 aa15.9■□□□□ 0.14
NR1H3-230ENST00000527949 KIAA0232Q92628 1395 aa15.89■□□□□ 0.13
NR1H3-230ENST00000527949 EVA1CP58658 441 aa15.89■□□□□ 0.13
NR1H3-230ENST00000527949 EVC2Q86UK5 1308 aa15.89■□□□□ 0.13
NR1H3-230ENST00000527949 PPIP5K1Q6PFW1 1433 aa15.88■□□□□ 0.13
NR1H3-230ENST00000527949 SRPK2P78362 688 aaKnown RBP15.88■□□□□ 0.13
NR1H3-230ENST00000527949 TONSLQ96HA7 1378 aa15.87■□□□□ 0.13
NR1H3-230ENST00000527949 STRN4Q9NRL3 753 aa15.87■□□□□ 0.13
NR1H3-230ENST00000527949 THRAP3Q9Y2W1 955 aaKnown RBP15.87■□□□□ 0.13
NR1H3-230ENST00000527949 TNS1Q9HBL0 1735 aaKnown RBP15.86■□□□□ 0.13
NR1H3-230ENST00000527949 YY1P25490 414 aa15.86■□□□□ 0.13
NR1H3-230ENST00000527949 PHRF1Q9P1Y6 1649 aaKnown RBP15.86■□□□□ 0.13
NR1H3-230ENST00000527949 TCP11L2Q8N4U5 519 aa15.85■□□□□ 0.13
NR1H3-230ENST00000527949 SPON1Q9HCB6 807 aa15.85■□□□□ 0.13
NR1H3-230ENST00000527949 CABP2Q9NPB3 220 aa15.85■□□□□ 0.13
NR1H3-230ENST00000527949 USP19O94966 1318 aa15.85■□□□□ 0.13
NR1H3-230ENST00000527949 ZC3H6P61129 1189 aaKnown RBP15.84■□□□□ 0.13
NR1H3-230ENST00000527949 CHRNA2Q15822 529 aa15.84■□□□□ 0.13
NR1H3-230ENST00000527949 PPP1R1BQ9UD71 204 aaPredicted RBP15.84■□□□□ 0.13
NR1H3-230ENST00000527949 USP6P35125 1406 aa15.84■□□□□ 0.13
NR1H3-230ENST00000527949 SSH2Q76I76 1423 aa15.84■□□□□ 0.13
NR1H3-230ENST00000527949 USP35Q9P2H5 1018 aa15.83■□□□□ 0.12
NR1H3-230ENST00000527949 CPDO75976 1380 aa15.83■□□□□ 0.12
NR1H3-230ENST00000527949 NINLQ9Y2I6 1382 aa15.83■□□□□ 0.12
NR1H3-230ENST00000527949 NLRP13Q86W25 1043 aa15.82■□□□□ 0.12
NR1H3-230ENST00000527949 PUS7Q96PZ0 661 aaKnown RBP15.82■□□□□ 0.12
NR1H3-230ENST00000527949 ZNF692Q9BU19 519 aaPredicted RBP15.82■□□□□ 0.12
NR1H3-230ENST00000527949 KCNQ2O43526 872 aa15.81■□□□□ 0.12
NR1H3-230ENST00000527949 CARD11Q9BXL7 1154 aa15.81■□□□□ 0.12
NR1H3-230ENST00000527949 CLSPNQ9HAW4 1339 aa15.81■□□□□ 0.12
NR1H3-230ENST00000527949 CABP1Q9NZU7 370 aa15.81■□□□□ 0.12
NR1H3-230ENST00000527949 NRKQ7Z2Y5 1582 aa15.8■□□□□ 0.12
NR1H3-230ENST00000527949 SLC24A1O60721 1099 aa15.8■□□□□ 0.12
NR1H3-230ENST00000527949 ABTB2Q8N961 1025 aa15.8■□□□□ 0.12
NR1H3-230ENST00000527949 AKAP12Q02952 1782 aa15.8■□□□□ 0.12
NR1H3-230ENST00000527949 CPSF1Q10570 1443 aaKnown RBP15.79■□□□□ 0.12
NR1H3-230ENST00000527949 LARP1Q6PKG0 1096 aaKnown RBP15.79■□□□□ 0.12
NR1H3-230ENST00000527949 TIMELESSQ9UNS1 1208 aa15.79■□□□□ 0.12
NR1H3-230ENST00000527949 SLIT3O75094 1523 aa15.78■□□□□ 0.12
NR1H3-230ENST00000527949 LMO7Q8WWI1 1683 aa15.77■□□□□ 0.12
NR1H3-230ENST00000527949 RREB1Q92766 1687 aa15.77■□□□□ 0.12
NR1H3-230ENST00000527949 TTC21AQ8NDW8 1320 aa15.77■□□□□ 0.12
NR1H3-230ENST00000527949 PLSCR1O15162 318 aa15.77■□□□□ 0.12
NR1H3-230ENST00000527949 NUTM2GQ5VZR2 741 aa15.77■□□□□ 0.12
NR1H3-230ENST00000527949 OVOS2A0A0G2JMS6 1433 aa15.77■□□□□ 0.11
NR1H3-230ENST00000527949 OVOS2A0A0J9YW53 1432 aa15.77■□□□□ 0.11
NR1H3-230ENST00000527949 OVOS2Q6IE36 1432 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms